Incidental Mutation 'R8279:Or2q1'
| ID |
638111 |
| Institutional Source |
Beutler Lab
|
| Gene Symbol |
Or2q1
|
| Ensembl Gene |
ENSMUSG00000054431 |
| Gene Name |
olfactory receptor family 2 subfamily Q member 1 |
| Synonyms |
Olfr450, GA_x6K02T2P3E9-4742413-4741481, MOR257-3 |
| MMRRC Submission |
067702-MU
|
| Accession Numbers |
|
| Essential gene? |
Probably non essential
(E-score: 0.140)
|
| Stock # |
R8279 (G1)
|
| Quality Score |
225.009 |
|
Status
|
Validated
|
| Chromosome |
6 |
| Chromosomal Location |
42794407-42795339 bp(+) (GRCm39) |
| Type of Mutation |
missense |
| DNA Base Change (assembly) |
A to T
at 42794557 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Isoleucine to Phenylalanine
at position 51
(I51F)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000068823
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000067503]
|
| AlphaFold |
Q8VF81 |
| Predicted Effect |
probably damaging
Transcript: ENSMUST00000067503
AA Change: I51F
PolyPhen 2
Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
|
| SMART Domains |
Protein: ENSMUSP00000068823
Gene: ENSMUSG00000054431
AA Change: I51F
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:7tm_4
|
33 |
308 |
8.2e-49 |
PFAM |
|
Pfam:7tm_1
|
43 |
291 |
1.2e-19 |
PFAM |
|
| Coding Region Coverage |
- 1x: 100.0%
- 3x: 100.0%
- 10x: 99.8%
- 20x: 99.3%
|
| Validation Efficiency |
100% (33/33) |
| MGI Phenotype |
FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 33 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| Abcb11 |
T |
C |
2: 69,069,549 (GRCm39) |
N1282S |
probably benign |
Het |
| Als2cl |
A |
G |
9: 110,723,653 (GRCm39) |
H683R |
probably damaging |
Het |
| Ank2 |
C |
T |
3: 126,726,820 (GRCm39) |
D825N |
probably benign |
Het |
| Aven |
C |
T |
2: 112,390,120 (GRCm39) |
R8W |
probably benign |
Het |
| Axl |
C |
T |
7: 25,463,379 (GRCm39) |
D633N |
probably benign |
Het |
| C3 |
A |
G |
17: 57,522,809 (GRCm39) |
V1025A |
probably benign |
Het |
| Cc2d2a |
T |
C |
5: 43,893,487 (GRCm39) |
S1489P |
probably benign |
Het |
| Ccng2 |
C |
G |
5: 93,421,202 (GRCm39) |
S237R |
probably benign |
Het |
| Cdk14 |
G |
A |
5: 5,316,125 (GRCm39) |
|
probably benign |
Het |
| Clpb |
T |
C |
7: 101,355,695 (GRCm39) |
V183A |
possibly damaging |
Het |
| Cpa3 |
C |
T |
3: 20,277,478 (GRCm39) |
M232I |
possibly damaging |
Het |
| Cyp2j7 |
A |
G |
4: 96,116,796 (GRCm39) |
|
probably null |
Het |
| Dnah2 |
A |
G |
11: 69,366,399 (GRCm39) |
I1907T |
probably damaging |
Het |
| Efemp1 |
T |
C |
11: 28,871,795 (GRCm39) |
F437L |
possibly damaging |
Het |
| Fat1 |
T |
A |
8: 45,483,384 (GRCm39) |
|
probably null |
Het |
| Fry |
A |
T |
5: 150,419,726 (GRCm39) |
T599S |
|
Het |
| Gm10142 |
T |
A |
10: 77,552,001 (GRCm39) |
*121R |
probably null |
Het |
| Kcng3 |
A |
C |
17: 83,895,254 (GRCm39) |
F404C |
probably damaging |
Het |
| Mefv |
T |
G |
16: 3,533,086 (GRCm39) |
H395P |
unknown |
Het |
| Mrc1 |
T |
A |
2: 14,271,168 (GRCm39) |
D357E |
possibly damaging |
Het |
| Muc15 |
A |
G |
2: 110,562,052 (GRCm39) |
T163A |
probably benign |
Het |
| Ncdn |
T |
C |
4: 126,644,199 (GRCm39) |
T208A |
probably benign |
Het |
| Or8b54 |
G |
A |
9: 38,686,577 (GRCm39) |
V9M |
noncoding transcript |
Het |
| Pdpk1 |
A |
G |
17: 24,307,147 (GRCm39) |
S395P |
probably benign |
Het |
| Slc27a6 |
T |
C |
18: 58,705,251 (GRCm39) |
V211A |
probably benign |
Het |
| Slco3a1 |
T |
C |
7: 73,934,144 (GRCm39) |
D676G |
possibly damaging |
Het |
| Slfn4 |
T |
G |
11: 83,077,482 (GRCm39) |
M90R |
possibly damaging |
Het |
| Ssbp4 |
T |
C |
8: 71,054,955 (GRCm39) |
D68G |
probably damaging |
Het |
| Sval3 |
A |
G |
6: 41,949,371 (GRCm39) |
T70A |
possibly damaging |
Het |
| Taf1c |
C |
T |
8: 120,325,750 (GRCm39) |
R704Q |
probably benign |
Het |
| Tex15 |
T |
A |
8: 34,061,765 (GRCm39) |
D398E |
probably damaging |
Het |
| Tmprss3 |
A |
T |
17: 31,416,709 (GRCm39) |
V9E |
probably benign |
Het |
| Vps35l |
T |
A |
7: 118,345,722 (GRCm39) |
M109K |
probably benign |
Het |
|
| Other mutations in Or2q1 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL01528:Or2q1
|
APN |
6 |
42,795,208 (GRCm39) |
missense |
probably damaging |
0.99 |
|
IGL01720:Or2q1
|
APN |
6 |
42,794,527 (GRCm39) |
missense |
probably benign |
0.00 |
|
IGL02457:Or2q1
|
APN |
6 |
42,795,176 (GRCm39) |
missense |
probably damaging |
0.97 |
|
R0376:Or2q1
|
UTSW |
6 |
42,795,226 (GRCm39) |
missense |
probably benign |
0.00 |
|
R1804:Or2q1
|
UTSW |
6 |
42,795,155 (GRCm39) |
missense |
possibly damaging |
0.66 |
|
R1823:Or2q1
|
UTSW |
6 |
42,795,202 (GRCm39) |
missense |
possibly damaging |
0.49 |
|
R2115:Or2q1
|
UTSW |
6 |
42,794,431 (GRCm39) |
missense |
possibly damaging |
0.65 |
|
R4817:Or2q1
|
UTSW |
6 |
42,794,896 (GRCm39) |
missense |
possibly damaging |
0.78 |
|
R5730:Or2q1
|
UTSW |
6 |
42,795,094 (GRCm39) |
nonsense |
probably null |
|
|
R5938:Or2q1
|
UTSW |
6 |
42,794,701 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R6514:Or2q1
|
UTSW |
6 |
42,794,930 (GRCm39) |
missense |
probably damaging |
0.97 |
|
R7050:Or2q1
|
UTSW |
6 |
42,794,504 (GRCm39) |
missense |
possibly damaging |
0.61 |
|
R7211:Or2q1
|
UTSW |
6 |
42,794,950 (GRCm39) |
missense |
probably benign |
0.41 |
|
R8863:Or2q1
|
UTSW |
6 |
42,794,780 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8933:Or2q1
|
UTSW |
6 |
42,794,950 (GRCm39) |
missense |
probably benign |
0.36 |
|
R9039:Or2q1
|
UTSW |
6 |
42,794,545 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R9416:Or2q1
|
UTSW |
6 |
42,795,197 (GRCm39) |
missense |
probably benign |
0.01 |
|
Z1177:Or2q1
|
UTSW |
6 |
42,795,133 (GRCm39) |
missense |
possibly damaging |
0.93 |
|
Z1189:Or2q1
|
UTSW |
6 |
42,794,447 (GRCm39) |
missense |
probably damaging |
1.00 |
|
| Predicted Primers |
PCR Primer
(F):5'- TGTCAGCTTGCAATACCTGTC -3'
(R):5'- TAGGACATTGCTCCCAAAAGGAAG -3'
Sequencing Primer
(F):5'- CCAGTTGTGAAATTCATGGGCCAG -3'
(R):5'- CCACCCAAGGCTAAGGAGATATAG -3'
|
| Posted On |
2020-07-28 |
Incidental Mutation