Incidental Mutation 'R8304:Tfg'
ID 639415
Institutional Source Beutler Lab
Gene Symbol Tfg
Ensembl Gene ENSMUSG00000022757
Gene Name Trk-fused gene
Synonyms
MMRRC Submission 067791-MU
Accession Numbers
Essential gene? Probably essential (E-score: 0.944) question?
Stock # R8304 (G1)
Quality Score 225.009
Status Validated
Chromosome 16
Chromosomal Location 56510695-56537813 bp(-) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) T to C at 56521581 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Glutamic Acid to Glycine at position 145 (E145G)
Ref Sequence ENSEMBL: ENSMUSP00000067867 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000065515] [ENSMUST00000121554] [ENSMUST00000128551] [ENSMUST00000136394] [ENSMUST00000141404] [ENSMUST00000156522]
AlphaFold Q9Z1A1
Predicted Effect possibly damaging
Transcript: ENSMUST00000065515
AA Change: E145G

PolyPhen 2 Score 0.871 (Sensitivity: 0.83; Specificity: 0.93)
SMART Domains Protein: ENSMUSP00000067867
Gene: ENSMUSG00000022757
AA Change: E145G

DomainStartEndE-ValueType
PB1 10 91 5.97e-19 SMART
coiled coil region 97 124 N/A INTRINSIC
low complexity region 208 236 N/A INTRINSIC
low complexity region 241 269 N/A INTRINSIC
low complexity region 272 295 N/A INTRINSIC
low complexity region 304 334 N/A INTRINSIC
low complexity region 361 373 N/A INTRINSIC
Predicted Effect noncoding transcript
Transcript: ENSMUST00000121554
SMART Domains Protein: ENSMUSP00000112562
Gene: ENSMUSG00000022757

DomainStartEndE-ValueType
PB1 10 91 5.97e-19 SMART
coiled coil region 97 124 N/A INTRINSIC
Predicted Effect
SMART Domains Protein: ENSMUSP00000121564
Gene: ENSMUSG00000022757
AA Change: E83G

DomainStartEndE-ValueType
Blast:PB1 2 30 6e-11 BLAST
coiled coil region 35 62 N/A INTRINSIC
low complexity region 147 175 N/A INTRINSIC
low complexity region 180 208 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000128551
SMART Domains Protein: ENSMUSP00000119561
Gene: ENSMUSG00000022757

DomainStartEndE-ValueType
PB1 10 91 5.97e-19 SMART
Predicted Effect probably benign
Transcript: ENSMUST00000136394
SMART Domains Protein: ENSMUSP00000120677
Gene: ENSMUSG00000022757

DomainStartEndE-ValueType
PB1 10 91 5.97e-19 SMART
coiled coil region 97 124 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000141404
SMART Domains Protein: ENSMUSP00000117405
Gene: ENSMUSG00000022757

DomainStartEndE-ValueType
PB1 10 89 3.76e-16 SMART
Predicted Effect noncoding transcript
Transcript: ENSMUST00000156522
AA Change: E19G
SMART Domains Protein: ENSMUSP00000119884
Gene: ENSMUSG00000022757
AA Change: E19G

DomainStartEndE-ValueType
low complexity region 82 139 N/A INTRINSIC
low complexity region 142 165 N/A INTRINSIC
low complexity region 174 202 N/A INTRINSIC
Coding Region Coverage
  • 1x: 100.0%
  • 3x: 99.9%
  • 10x: 99.6%
  • 20x: 98.9%
Validation Efficiency 98% (58/59)
MGI Phenotype FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] There are several documented fusion oncoproteins encoded partially by this gene. This gene also participates in several oncogenic rearrangements resulting in anaplastic lymphoma and mixoid chondrosarcoma, and may play a role in the NF-kappaB pathway. Multiple transcript variants have been found for this gene. [provided by RefSeq, Sep 2010]
Allele List at MGI
Other mutations in this stock
Total: 58 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Abca9 A G 11: 109,997,954 (GRCm39) probably null Het
Akap11 T C 14: 78,750,672 (GRCm39) T572A Het
Amigo2 A T 15: 97,144,038 (GRCm39) L128Q probably damaging Het
Ankrd12 A G 17: 66,291,542 (GRCm39) I1297T possibly damaging Het
Arhgap32 T A 9: 32,167,233 (GRCm39) C623* probably null Het
Armc2 T C 10: 41,823,935 (GRCm39) Y511C probably damaging Het
Asb15 C T 6: 24,559,296 (GRCm39) P147L possibly damaging Het
Caprin1 G T 2: 103,599,862 (GRCm39) N604K probably damaging Het
Ccnl2 T C 4: 155,897,679 (GRCm39) F113L probably benign Het
Cltc C T 11: 86,616,087 (GRCm39) R393H probably benign Het
Cul4a G A 8: 13,177,727 (GRCm39) C289Y possibly damaging Het
Cyp4a29 T A 4: 115,111,653 (GRCm39) F477I probably damaging Het
Dapk2 C T 9: 66,139,027 (GRCm39) A116V possibly damaging Het
Ddx60 T C 8: 62,451,803 (GRCm39) I1231T possibly damaging Het
Eif5b A G 1: 38,084,774 (GRCm39) I874V probably benign Het
Eral1 A T 11: 77,966,828 (GRCm39) S196T probably damaging Het
Erc2 T G 14: 27,375,122 (GRCm39) D113E probably damaging Het
Frmpd2 A G 14: 33,274,066 (GRCm39) I1103V possibly damaging Het
Galm A G 17: 80,490,766 (GRCm39) T308A probably damaging Het
Helz2 A T 2: 180,871,950 (GRCm39) N2650K probably benign Het
Herc2 A G 7: 55,809,186 (GRCm39) D2562G probably damaging Het
Hmmr G A 11: 40,612,499 (GRCm39) S206F probably damaging Het
Hspbap1 T A 16: 35,607,695 (GRCm39) L67* probably null Het
Irx3 T A 8: 92,526,834 (GRCm39) D290V probably damaging Het
Kcns1 A T 2: 164,010,022 (GRCm39) Y246N probably damaging Het
Kidins220 A G 12: 25,107,127 (GRCm39) T1557A probably benign Het
Lrriq1 T C 10: 103,069,929 (GRCm39) N29S possibly damaging Het
Mmp24 T C 2: 155,641,759 (GRCm39) F196L possibly damaging Het
Mroh2b T C 15: 4,955,119 (GRCm39) V704A probably damaging Het
Mst1 A G 9: 107,958,803 (GRCm39) M112V probably benign Het
Myh8 C A 11: 67,195,162 (GRCm39) H1659N possibly damaging Het
Nlgn1 C T 3: 26,187,534 (GRCm39) C117Y probably damaging Het
Opa1 C T 16: 29,416,489 (GRCm39) T237M possibly damaging Het
Or2r2 C T 6: 42,463,672 (GRCm39) V152I probably benign Het
Or51f5 A G 7: 102,423,917 (GRCm39) Y62C possibly damaging Het
Or5v1 A T 17: 37,810,261 (GRCm39) T240S probably damaging Het
Or8b57 A T 9: 40,003,650 (GRCm39) I204N probably damaging Het
P3h1 C T 4: 119,104,402 (GRCm39) T641M probably damaging Het
Pak5 T C 2: 135,940,203 (GRCm39) H537R probably benign Het
Ppp1r12b A T 1: 134,824,101 (GRCm39) L174Q possibly damaging Het
Prkg1 A G 19: 30,701,584 (GRCm39) V326A possibly damaging Het
Psmb3 T A 11: 97,601,995 (GRCm39) C122S probably benign Het
Sh3bgrl3 C A 4: 133,855,312 (GRCm39) A45S probably benign Het
Slc25a47 T C 12: 108,821,868 (GRCm39) V219A possibly damaging Het
Slfn9 A C 11: 82,873,605 (GRCm39) S433A probably benign Het
Spata13 A T 14: 60,993,957 (GRCm39) R1136S possibly damaging Het
Stab1 C A 14: 30,870,911 (GRCm39) A1313S probably benign Het
Stim1 G A 7: 102,084,688 (GRCm39) A547T possibly damaging Het
Taf5l A T 8: 124,730,251 (GRCm39) I146N probably benign Het
Tbc1d12 A T 19: 38,825,824 (GRCm39) E225V possibly damaging Het
Tesc T C 5: 118,194,495 (GRCm39) Y135H probably benign Het
Tg T A 15: 66,565,109 (GRCm39) C1150* probably null Het
Tmtc1 T C 6: 148,172,883 (GRCm39) N616S probably damaging Het
Trpm7 A T 2: 126,639,797 (GRCm39) W1600R probably damaging Het
Ttc17 A T 2: 94,199,526 (GRCm39) probably benign Het
Zfand1 A T 3: 10,413,615 (GRCm39) L24* probably null Het
Zfp282 AGCGGCGGCGGCGGCGGC AGCGGCGGCGGCGGC 6: 47,881,722 (GRCm39) probably benign Het
Zfp770 A C 2: 114,027,891 (GRCm39) F59L probably damaging Het
Other mutations in Tfg
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01402:Tfg APN 16 56,514,856 (GRCm39) splice site probably benign
IGL01404:Tfg APN 16 56,514,856 (GRCm39) splice site probably benign
IGL01548:Tfg APN 16 56,521,465 (GRCm39) missense probably damaging 1.00
trafalgar UTSW 16 56,532,997 (GRCm39) missense possibly damaging 0.90
R0003:Tfg UTSW 16 56,511,351 (GRCm39) missense possibly damaging 0.96
R0003:Tfg UTSW 16 56,511,351 (GRCm39) missense possibly damaging 0.96
R0036:Tfg UTSW 16 56,511,358 (GRCm39) missense probably benign 0.18
R1730:Tfg UTSW 16 56,533,152 (GRCm39) missense probably damaging 1.00
R2025:Tfg UTSW 16 56,525,988 (GRCm39) missense possibly damaging 0.65
R4629:Tfg UTSW 16 56,533,039 (GRCm39) missense probably damaging 1.00
R4676:Tfg UTSW 16 56,514,854 (GRCm39) splice site probably null
R4879:Tfg UTSW 16 56,521,520 (GRCm39) missense probably damaging 1.00
R4916:Tfg UTSW 16 56,514,759 (GRCm39) splice site probably null
R5237:Tfg UTSW 16 56,533,071 (GRCm39) missense possibly damaging 0.80
R5568:Tfg UTSW 16 56,521,450 (GRCm39) missense probably benign 0.14
R5698:Tfg UTSW 16 56,521,467 (GRCm39) missense probably damaging 0.98
R5887:Tfg UTSW 16 56,514,779 (GRCm39) nonsense probably null
R7213:Tfg UTSW 16 56,521,516 (GRCm39) missense probably benign 0.03
R7392:Tfg UTSW 16 56,532,972 (GRCm39) critical splice donor site probably null
R7514:Tfg UTSW 16 56,525,972 (GRCm39) critical splice donor site probably null
R7632:Tfg UTSW 16 56,532,997 (GRCm39) missense possibly damaging 0.90
R9254:Tfg UTSW 16 56,526,050 (GRCm39) missense probably damaging 1.00
R9432:Tfg UTSW 16 56,524,868 (GRCm39) nonsense probably null
Predicted Primers PCR Primer
(F):5'- AACTGGCTGAACCCTTAAGAC -3'
(R):5'- GGGCAGTGACTGTTAGAGAC -3'

Sequencing Primer
(F):5'- GCTGAACCCTTAAGACATAGTATTTC -3'
(R):5'- TCCCTGAAGCATGAACA -3'
Posted On 2020-07-28