Incidental Mutation 'R8260:Ctnnd2'
ID 640036
Institutional Source Beutler Lab
Gene Symbol Ctnnd2
Ensembl Gene ENSMUSG00000022240
Gene Name catenin delta 2
Synonyms Nprap, Catnd2, neurojugin, catenin (cadherin associated protein), delta 2
MMRRC Submission 067685-MU
Accession Numbers
Essential gene? Non essential (E-score: 0.000) question?
Stock # R8260 (G1)
Quality Score 225.009
Status Not validated
Chromosome 15
Chromosomal Location 30172739-31029487 bp(+) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) A to G at 30634879 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Threonine to Alanine at position 176 (T176A)
Ref Sequence ENSEMBL: ENSMUSP00000080427 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000081728]
AlphaFold no structure available at present
Predicted Effect possibly damaging
Transcript: ENSMUST00000081728
AA Change: T176A

PolyPhen 2 Score 0.844 (Sensitivity: 0.83; Specificity: 0.93)
SMART Domains Protein: ENSMUSP00000080427
Gene: ENSMUSG00000022240
AA Change: T176A

DomainStartEndE-ValueType
coiled coil region 50 84 N/A INTRINSIC
low complexity region 87 97 N/A INTRINSIC
low complexity region 148 159 N/A INTRINSIC
low complexity region 216 230 N/A INTRINSIC
low complexity region 238 257 N/A INTRINSIC
ARM 577 617 1.85e-8 SMART
ARM 621 662 1.15e-9 SMART
ARM 663 720 1.51e1 SMART
ARM 722 769 2.74e1 SMART
ARM 830 871 4.88e0 SMART
ARM 902 942 2.76e-7 SMART
low complexity region 964 973 N/A INTRINSIC
ARM 995 1039 5.64e-4 SMART
low complexity region 1086 1099 N/A INTRINSIC
Coding Region Coverage
  • 1x: 100.0%
  • 3x: 99.9%
  • 10x: 99.7%
  • 20x: 98.9%
Validation Efficiency
MGI Phenotype FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes an adhesive junction associated protein of the armadillo/beta-catenin superfamily and is implicated in brain and eye development and cancer formation. The protein encoded by this gene promotes the disruption of E-cadherin based adherens junction to favor cell spreading upon stimulation by hepatocyte growth factor. This gene is overexpressed in prostate adenocarcinomas and is associated with decreased expression of tumor suppressor E-cadherin in this tissue. This gene resides in a region of the short arm of chromosome 5 that is deleted in Cri du Chat syndrome. Alternative splicing results in multiple transcript variants encoding different isoforms. [provided by RefSeq, Dec 2013]
PHENOTYPE: Mice homozygous for a reporter allele exhibit abnormal conditioning, spatial learning and coordination behaviors and abnormal long term potentiation. [provided by MGI curators]
Allele List at MGI

All alleles(1) : Targeted(1)

Other mutations in this stock
Total: 86 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
4930578I06Rik G C 14: 64,223,633 (GRCm39) L48V probably benign Het
Acbd3 T C 1: 180,566,095 (GRCm39) Y263H probably damaging Het
Acot4 C A 12: 84,088,809 (GRCm39) P219Q possibly damaging Het
Adcy6 A G 15: 98,498,919 (GRCm39) F294S probably damaging Het
Ahcyl T C 16: 45,974,786 (GRCm39) E197G probably damaging Het
Aplf T C 6: 87,606,987 (GRCm39) R476G probably benign Het
Arid1b A G 17: 5,382,788 (GRCm39) T1292A probably benign Het
Atp2c1 T A 9: 105,295,778 (GRCm39) I649F probably damaging Het
Bbs10 C T 10: 111,136,104 (GRCm39) Q406* probably null Het
Bcas3 T A 11: 85,400,372 (GRCm39) M447K possibly damaging Het
Bmal1 A T 7: 112,884,258 (GRCm39) I92F probably damaging Het
Cars1 T C 7: 143,139,446 (GRCm39) D214G probably benign Het
Ccdc88a A T 11: 29,443,934 (GRCm39) I1410F probably benign Het
Cd55b A T 1: 130,316,415 (GRCm39) L378H probably damaging Het
Cdh1 G A 8: 107,330,979 (GRCm39) E37K probably benign Het
Cep72 T C 13: 74,206,465 (GRCm39) Y119C probably damaging Het
D630045J12Rik T A 6: 38,119,846 (GRCm39) probably null Het
Ddi1 A T 9: 6,265,524 (GRCm39) C282S probably damaging Het
Ddit4 T C 10: 59,787,277 (GRCm39) T20A probably benign Het
Dpp10 T A 1: 123,614,024 (GRCm39) T102S probably benign Het
Ep400 T A 5: 110,903,478 (GRCm39) K374* probably null Het
Epha3 A G 16: 63,403,917 (GRCm39) L728P probably damaging Het
Fbxw21 C A 9: 108,975,614 (GRCm39) probably null Het
Frmpd1 A G 4: 45,244,638 (GRCm39) E109G probably damaging Het
Ggt1 C T 10: 75,417,245 (GRCm39) P332L probably damaging Het
Gm4779 G C X: 100,837,390 (GRCm39) T171S possibly damaging Het
Gm5431 A T 11: 48,785,556 (GRCm39) I273K probably benign Het
Gon4l A G 3: 88,799,937 (GRCm39) N861D probably damaging Het
Grm5 T C 7: 87,724,340 (GRCm39) probably null Het
Helt T C 8: 46,745,745 (GRCm39) N84S possibly damaging Het
Hnrnpa0 G T 13: 58,275,228 (GRCm39) Y300* probably null Het
Ints1 T C 5: 139,750,968 (GRCm39) T810A Het
Irf2bp1 C T 7: 18,740,079 (GRCm39) A573V possibly damaging Het
Itgbl1 C A 14: 124,065,246 (GRCm39) D133E probably benign Het
Kctd15 A G 7: 34,344,267 (GRCm39) F128S possibly damaging Het
Klra17 T A 6: 129,808,421 (GRCm39) N271Y probably damaging Het
Kmt2c T A 5: 25,610,514 (GRCm39) E197D possibly damaging Het
Larp1 C A 11: 57,949,515 (GRCm39) T1048K probably benign Het
Macf1 A G 4: 123,365,863 (GRCm39) V2966A probably benign Het
Magi3 A G 3: 103,922,625 (GRCm39) L1364P probably benign Het
Malrd1 T C 2: 15,619,017 (GRCm39) S294P Het
Med13l C T 5: 118,886,794 (GRCm39) T1565I possibly damaging Het
Mov10l1 A G 15: 88,896,313 (GRCm39) D719G probably benign Het
Mtcl3 T A 10: 29,024,270 (GRCm39) H395Q possibly damaging Het
Muc4 CAC CACTAC 16: 32,575,367 (GRCm39) probably benign Het
Myh14 T C 7: 44,264,800 (GRCm39) E1654G probably damaging Het
Myo1c C T 11: 75,546,942 (GRCm39) probably benign Het
Myo9a A G 9: 59,817,961 (GRCm39) T2343A probably benign Het
Or1j12 A G 2: 36,342,897 (GRCm39) Q100R probably damaging Het
Or2ag18 A T 7: 106,405,234 (GRCm39) V145E possibly damaging Het
Or2d2b A T 7: 106,706,062 (GRCm39) M2K probably benign Het
Or4m1 T C 14: 50,557,615 (GRCm39) K226E probably benign Het
Or52m2 T A 7: 102,263,432 (GRCm39) I255F possibly damaging Het
Or52n5 T A 7: 104,587,879 (GRCm39) Y49N probably damaging Het
Or6c2 T A 10: 129,362,957 (GRCm39) I287N possibly damaging Het
Or8k53 T A 2: 86,177,276 (GRCm39) Y278F possibly damaging Het
Or9g3 A T 2: 85,589,820 (GRCm39) L300Q probably damaging Het
Osmr A T 15: 6,844,897 (GRCm39) D957E probably benign Het
Pappa T A 4: 65,234,419 (GRCm39) V1408E probably damaging Het
Pcnx3 C T 19: 5,715,412 (GRCm39) G1946E probably damaging Het
Pdcd6ip A T 9: 113,501,865 (GRCm39) D464E probably benign Het
Pde1c T C 6: 56,114,404 (GRCm39) Y503C probably benign Het
Potefam3d A T 8: 69,972,400 (GRCm39) D116E possibly damaging Het
Prob1 T A 18: 35,787,210 (GRCm39) E348V possibly damaging Het
Rnls A G 19: 33,180,048 (GRCm39) L134S probably damaging Het
Scrn3 T C 2: 73,166,202 (GRCm39) Y412H probably damaging Het
Serpina3g T C 12: 104,205,362 (GRCm39) S34P probably benign Het
Sertad3 G A 7: 27,175,784 (GRCm39) A73T probably benign Het
Sez6l C T 5: 112,609,122 (GRCm39) A576T probably benign Het
Sh3tc2 G A 18: 62,146,137 (GRCm39) R1172H probably damaging Het
Sirt3 A G 7: 140,456,319 (GRCm39) V110A Het
Smpd3 A T 8: 106,984,047 (GRCm39) D557E probably benign Het
Sptssb A T 3: 69,728,305 (GRCm39) M44K probably damaging Het
Tars2 A G 3: 95,662,132 (GRCm39) W7R probably damaging Het
Tbc1d9b A G 11: 50,055,013 (GRCm39) D964G probably benign Het
Tiam2 A T 17: 3,568,594 (GRCm39) D1580V possibly damaging Het
Tmeff2 T A 1: 50,977,478 (GRCm39) V130D probably damaging Het
Top2a T A 11: 98,891,595 (GRCm39) E1176V probably null Het
Trappc9 C A 15: 72,813,758 (GRCm39) E680* probably null Het
Trip10 A G 17: 57,564,314 (GRCm39) N355S probably benign Het
Ttn T C 2: 76,596,337 (GRCm39) E20192G probably damaging Het
Vmn2r96 A G 17: 18,804,243 (GRCm39) M306V probably benign Het
Wdr90 A T 17: 26,064,141 (GRCm39) H1860Q probably damaging Het
Wrnip1 A G 13: 32,989,339 (GRCm39) I276V possibly damaging Het
Zfp608 T C 18: 55,030,821 (GRCm39) K1040E possibly damaging Het
Zfp808 T A 13: 62,320,552 (GRCm39) C594S probably benign Het
Other mutations in Ctnnd2
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00597:Ctnnd2 APN 15 30,647,287 (GRCm39) missense possibly damaging 0.73
IGL01612:Ctnnd2 APN 15 31,005,164 (GRCm39) missense probably damaging 1.00
IGL01923:Ctnnd2 APN 15 30,480,974 (GRCm39) missense probably damaging 0.99
IGL02183:Ctnnd2 APN 15 31,020,886 (GRCm39) missense probably damaging 1.00
IGL02186:Ctnnd2 APN 15 30,480,939 (GRCm39) missense probably damaging 0.99
IGL02226:Ctnnd2 APN 15 30,847,482 (GRCm39) missense probably benign 0.01
IGL02307:Ctnnd2 APN 15 30,647,357 (GRCm39) missense possibly damaging 0.86
IGL02407:Ctnnd2 APN 15 30,966,914 (GRCm39) missense probably damaging 1.00
IGL02474:Ctnnd2 APN 15 30,669,708 (GRCm39) missense possibly damaging 0.71
IGL02718:Ctnnd2 APN 15 31,027,762 (GRCm39) missense probably damaging 1.00
IGL03249:Ctnnd2 APN 15 30,683,382 (GRCm39) missense probably benign 0.45
IGL03328:Ctnnd2 APN 15 30,921,993 (GRCm39) splice site probably benign
carpe UTSW 15 30,905,966 (GRCm39) missense probably damaging 1.00
diem UTSW 15 30,683,493 (GRCm39) missense possibly damaging 0.85
P0016:Ctnnd2 UTSW 15 30,967,084 (GRCm39) missense probably benign 0.00
R0130:Ctnnd2 UTSW 15 30,922,059 (GRCm39) missense probably damaging 1.00
R0408:Ctnnd2 UTSW 15 30,634,823 (GRCm39) missense probably damaging 1.00
R0611:Ctnnd2 UTSW 15 31,009,230 (GRCm39) missense possibly damaging 0.75
R0894:Ctnnd2 UTSW 15 30,332,301 (GRCm39) splice site probably benign
R1112:Ctnnd2 UTSW 15 30,922,026 (GRCm39) missense probably damaging 1.00
R1459:Ctnnd2 UTSW 15 30,847,445 (GRCm39) missense probably damaging 1.00
R1529:Ctnnd2 UTSW 15 30,887,267 (GRCm39) missense possibly damaging 0.91
R1532:Ctnnd2 UTSW 15 30,922,014 (GRCm39) missense probably damaging 1.00
R1701:Ctnnd2 UTSW 15 30,922,127 (GRCm39) missense probably damaging 1.00
R1807:Ctnnd2 UTSW 15 30,620,017 (GRCm39) missense probably damaging 1.00
R1881:Ctnnd2 UTSW 15 31,005,227 (GRCm39) splice site probably benign
R1960:Ctnnd2 UTSW 15 30,647,257 (GRCm39) missense probably damaging 0.96
R2121:Ctnnd2 UTSW 15 30,669,660 (GRCm39) missense probably damaging 1.00
R3839:Ctnnd2 UTSW 15 31,009,174 (GRCm39) splice site probably null
R3967:Ctnnd2 UTSW 15 30,647,075 (GRCm39) missense possibly damaging 0.81
R3980:Ctnnd2 UTSW 15 30,669,589 (GRCm39) missense probably benign 0.14
R4207:Ctnnd2 UTSW 15 30,972,973 (GRCm39) missense probably damaging 0.99
R4279:Ctnnd2 UTSW 15 30,905,966 (GRCm39) missense probably damaging 1.00
R4498:Ctnnd2 UTSW 15 30,620,020 (GRCm39) missense probably damaging 1.00
R4622:Ctnnd2 UTSW 15 31,009,259 (GRCm39) missense probably benign 0.00
R4622:Ctnnd2 UTSW 15 30,887,315 (GRCm39) missense probably benign 0.17
R4860:Ctnnd2 UTSW 15 30,881,313 (GRCm39) missense probably damaging 1.00
R4860:Ctnnd2 UTSW 15 30,881,313 (GRCm39) missense probably damaging 1.00
R4979:Ctnnd2 UTSW 15 31,009,221 (GRCm39) missense probably damaging 1.00
R5086:Ctnnd2 UTSW 15 30,683,493 (GRCm39) missense possibly damaging 0.85
R5330:Ctnnd2 UTSW 15 30,332,261 (GRCm39) missense probably damaging 1.00
R5459:Ctnnd2 UTSW 15 30,887,334 (GRCm39) missense probably damaging 1.00
R5595:Ctnnd2 UTSW 15 30,669,689 (GRCm39) missense probably benign 0.07
R5809:Ctnnd2 UTSW 15 30,847,523 (GRCm39) missense probably damaging 1.00
R5987:Ctnnd2 UTSW 15 30,683,387 (GRCm39) missense probably benign
R6245:Ctnnd2 UTSW 15 30,905,894 (GRCm39) missense probably damaging 1.00
R6379:Ctnnd2 UTSW 15 30,634,844 (GRCm39) missense probably damaging 1.00
R6737:Ctnnd2 UTSW 15 30,966,980 (GRCm39) nonsense probably null
R6979:Ctnnd2 UTSW 15 30,619,376 (GRCm39) missense probably damaging 0.99
R7133:Ctnnd2 UTSW 15 30,480,995 (GRCm39) missense possibly damaging 0.47
R7179:Ctnnd2 UTSW 15 30,683,510 (GRCm39) missense possibly damaging 0.95
R7267:Ctnnd2 UTSW 15 30,683,501 (GRCm39) missense probably benign 0.13
R7275:Ctnnd2 UTSW 15 30,905,855 (GRCm39) missense possibly damaging 0.94
R7386:Ctnnd2 UTSW 15 30,966,914 (GRCm39) missense probably damaging 1.00
R7649:Ctnnd2 UTSW 15 31,027,630 (GRCm39) missense probably benign 0.11
R7814:Ctnnd2 UTSW 15 31,020,874 (GRCm39) missense probably benign 0.00
R7849:Ctnnd2 UTSW 15 31,027,733 (GRCm39) missense probably damaging 1.00
R7857:Ctnnd2 UTSW 15 30,620,076 (GRCm39) missense probably benign 0.01
R8057:Ctnnd2 UTSW 15 30,847,497 (GRCm39) missense possibly damaging 0.89
R8236:Ctnnd2 UTSW 15 30,647,164 (GRCm39) missense probably benign
R8411:Ctnnd2 UTSW 15 30,647,179 (GRCm39) missense probably benign 0.33
R8802:Ctnnd2 UTSW 15 30,967,022 (GRCm39) missense probably damaging 1.00
R8891:Ctnnd2 UTSW 15 30,620,076 (GRCm39) missense probably benign 0.01
R8907:Ctnnd2 UTSW 15 30,905,873 (GRCm39) missense probably damaging 1.00
R8989:Ctnnd2 UTSW 15 30,669,660 (GRCm39) missense probably damaging 1.00
R9017:Ctnnd2 UTSW 15 30,881,316 (GRCm39) missense probably damaging 0.96
R9035:Ctnnd2 UTSW 15 30,332,162 (GRCm39) missense possibly damaging 0.77
R9061:Ctnnd2 UTSW 15 30,806,884 (GRCm39) missense probably damaging 1.00
R9303:Ctnnd2 UTSW 15 30,967,037 (GRCm39) missense probably damaging 0.99
R9475:Ctnnd2 UTSW 15 30,881,276 (GRCm39) missense probably damaging 1.00
Z1088:Ctnnd2 UTSW 15 30,966,959 (GRCm39) missense probably benign 0.28
Predicted Primers PCR Primer
(F):5'- AGATGGCTGGAATCATGTGC -3'
(R):5'- ACACAGCCGAGGACCTTTTG -3'

Sequencing Primer
(F):5'- GTGCATGTGATAATTCTAGGCTACTC -3'
(R):5'- CCGAGGACCTTTTGTAAGTTGTAC -3'
Posted On 2020-07-28