Mutagenetix > Incidental Mutation

Incidental Mutation 'R8253:Or5p50'

640132

Institutional Source

Beutler Lab

Gene Symbol

Or5p50

Ensembl Gene

ENSMUSG00000095910

Gene Name

olfactory receptor family 5 subfamily P member 50

Synonyms

MOR204-21, GA_x6K02T2PBJ9-10152980-10152036, Olfr469

MMRRC Submission

067679-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.092) question?

Stock #

R8253 (G1)

Quality Score

225.009

Status

Not validated

Chromosome

Chromosomal Location

107421730-107422674 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

A to G at 107421776 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Isoleucine to Threonine at position 300 (I300T)

Ref Sequence

ENSEMBL: ENSMUSP00000075122 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000075704]

AlphaFold

Q8VF66

Predicted Effect

probably damaging
Transcript: ENSMUST00000075704
AA Change: I300T

PolyPhen 2 Score 0.982 (Sensitivity: 0.75; Specificity: 0.96)

SMART Domains

Protein: ENSMUSP00000075122
Gene: ENSMUSG00000095910
AA Change: I300T

Domain	Start	End	E-Value	Type
Pfam:7tm_4	34	311	1.3e-53	PFAM
Pfam:7tm_1	44	293	2.4e-22	PFAM

Meta Mutation Damage Score

0.5338

Coding Region Coverage

1x: 100.0%
3x: 99.9%
10x: 99.7%
20x: 99.1%

Validation Efficiency

MGI Phenotype

FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]

Allele List at MGI

Other mutations in this stock

Total: 47 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Afap1l1	T	C	18: 61,874,702 (GRCm39)	E493G	probably benign	Het
Akr1a1	A	T	4: 116,493,840 (GRCm39)	D313E	probably damaging	Het
Ap1m1	T	A	8: 73,006,730 (GRCm39)	V242E	probably damaging	Het
Atad2b	T	A	12: 5,024,159 (GRCm39)	S670T	possibly damaging	Het
Atad2b	C	T	12: 5,024,160 (GRCm39)	S670L	probably benign	Het
Atp23	C	T	10: 126,704,543 (GRCm39)	G197S	probably benign	Het
Avpr1b	A	T	1: 131,537,154 (GRCm39)	T313S	probably benign	Het
Cblc	A	G	7: 19,520,157 (GRCm39)	I362T	probably damaging	Het
Ccdc171	T	A	4: 83,661,207 (GRCm39)	S1106T	probably damaging	Het
Cimap3	T	C	3: 105,905,683 (GRCm39)	M193V	probably benign	Het
Csde1	C	A	3: 102,946,037 (GRCm39)	N10K	probably damaging	Het
Csnk2a2	T	C	8: 96,215,005 (GRCm39)	Y24C		Het
Cyb5r4	G	T	9: 86,941,108 (GRCm39)	L420F	probably damaging	Het
Cyth4	A	G	15: 78,486,937 (GRCm39)	I22V	probably benign	Het
Dnah8	CGTGTCTTCAATATTTTGTTCCCTTTCCCGTAGGTGCCGTCCTTTGACTTTCCTGTGTCTTCAATATTTTGTTCCCTTTCCCGTAGGTGCCGTCCTTTGACTTTCCTGTGTCTTCAATATTTTGTTCCCTTTCCCGTAGGTGCCGTCCTT	CGTGTCTTCAATATTTTGTTCCCTTTCCCGTAGGTGCCGTCCTTTGACTTTCCTGTGTCTTCAATATTTTGTTCCCTTTCCCGTAGGTGCCGTCCTT	17: 30,979,841 (GRCm39)		probably null	Het
Dner	C	T	1: 84,512,598 (GRCm39)	G323E	probably damaging	Het
Elf1	T	C	14: 79,773,792 (GRCm39)	M1T	probably null	Het
Fam13c	T	C	10: 70,389,033 (GRCm39)	S520P	probably damaging	Het
Fhip1b	T	A	7: 105,028,294 (GRCm39)	H885L	possibly damaging	Het
Gabra2	A	G	5: 71,249,413 (GRCm39)	I30T	probably benign	Het
Gm6793	T	A	8: 112,741,640 (GRCm39)	M1L	probably benign	Het
Inpp5a	T	C	7: 139,061,556 (GRCm39)	L76P	probably damaging	Het
Itih5	T	C	2: 10,243,406 (GRCm39)	I381T	probably benign	Het
Lyrm7	T	C	11: 54,741,227 (GRCm39)	I36V	probably null	Het
Magi2	A	G	5: 20,814,305 (GRCm39)	I906V	probably benign	Het
Mup5	C	T	4: 61,752,811 (GRCm39)	A71T	probably benign	Het
Ndufaf6	G	A	4: 11,059,086 (GRCm39)	R248W	probably damaging	Het
Or52z14	A	T	7: 103,253,538 (GRCm39)	I226L	possibly damaging	Het
Palm	A	T	10: 79,643,511 (GRCm39)	K80*	probably null	Het
Pcyox1	C	T	6: 86,366,044 (GRCm39)	R390K	probably benign	Het
Pdx1	T	C	5: 147,207,459 (GRCm39)		probably null	Het
Pkp2	T	A	16: 16,086,406 (GRCm39)	V689D	probably damaging	Het
Prkar2a	G	T	9: 108,617,638 (GRCm39)	R232L	probably damaging	Het
Rasgrp4	C	T	7: 28,838,287 (GRCm39)	T87M	possibly damaging	Het
Ryr2	T	A	13: 11,842,439 (GRCm39)	Q486L	possibly damaging	Het
Shd	T	C	17: 56,283,295 (GRCm39)	V309A		Het
Skint7	C	T	4: 111,834,675 (GRCm39)	Q20*	probably null	Het
Slc35g1	C	A	19: 38,391,237 (GRCm39)	T173K	probably damaging	Het
Slit2	T	C	5: 48,433,013 (GRCm39)	F1073L	probably benign	Het
Snx18	T	A	13: 113,731,317 (GRCm39)	D559V	probably damaging	Het
Tbr1	G	T	2: 61,635,585 (GRCm39)	Q178H	probably benign	Het
Tmem145	T	G	7: 25,006,939 (GRCm39)	Y114D	probably damaging	Het
Ttc22	T	C	4: 106,495,717 (GRCm39)	L357P	probably damaging	Het
Uba2	T	C	7: 33,850,323 (GRCm39)	M377V	probably damaging	Het
Vps13c	T	A	9: 67,850,770 (GRCm39)	Y2242*	probably null	Het
Xdh	T	G	17: 74,225,377 (GRCm39)	Q475P	possibly damaging	Het
Zbtb42	T	G	12: 112,646,746 (GRCm39)	L307R	probably damaging	Het

Other mutations in Or5p50

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL02205:Or5p50	APN	7	107,421,798 (GRCm39)	missense	probably damaging	1.00
IGL02252:Or5p50	APN	7	107,422,353 (GRCm39)	missense	probably benign	0.04
R0365:Or5p50	UTSW	7	107,422,124 (GRCm39)	nonsense	probably null
R0647:Or5p50	UTSW	7	107,422,218 (GRCm39)	missense	probably benign	0.02
R0863:Or5p50	UTSW	7	107,422,581 (GRCm39)	missense	probably benign
R1830:Or5p50	UTSW	7	107,422,578 (GRCm39)	missense	probably benign	0.02
R2189:Or5p50	UTSW	7	107,421,822 (GRCm39)	missense	probably benign	0.09
R2316:Or5p50	UTSW	7	107,422,007 (GRCm39)	missense	probably benign	0.25
R6187:Or5p50	UTSW	7	107,421,781 (GRCm39)	missense	probably benign
R6305:Or5p50	UTSW	7	107,421,864 (GRCm39)	missense	probably benign	0.01
R6774:Or5p50	UTSW	7	107,422,395 (GRCm39)	missense	probably benign	0.06
R7019:Or5p50	UTSW	7	107,422,365 (GRCm39)	missense	probably benign	0.04
R7205:Or5p50	UTSW	7	107,421,782 (GRCm39)	missense	probably benign	0.01
R7466:Or5p50	UTSW	7	107,422,129 (GRCm39)	nonsense	probably null
R8128:Or5p50	UTSW	7	107,422,632 (GRCm39)	missense	probably damaging	1.00
R8251:Or5p50	UTSW	7	107,421,776 (GRCm39)	missense	probably damaging	0.98
R8252:Or5p50	UTSW	7	107,421,776 (GRCm39)	missense	probably damaging	0.98
R8791:Or5p50	UTSW	7	107,422,557 (GRCm39)	missense	possibly damaging	0.64
R9008:Or5p50	UTSW	7	107,422,628 (GRCm39)	missense	possibly damaging	0.53
R9381:Or5p50	UTSW	7	107,421,812 (GRCm39)	missense	probably damaging	1.00
R9509:Or5p50	UTSW	7	107,422,440 (GRCm39)	missense	probably benign
Z1176:Or5p50	UTSW	7	107,422,200 (GRCm39)	missense	probably benign	0.01

Predicted Primers

PCR Primer
(F):5'- TGAGCATCTACCCTCTGTAGTTG -3'
(R):5'- ATCCTGAAGATGCGCTCCAC -3'

Sequencing Primer
(F):5'- GTTGCTAAAAAGCTTCCAAGTGGC -3'
(R):5'- TGAAGATGCGCTCCACTGAGG -3'

Posted On

2020-07-28