Incidental Mutation 'R8319:Hnrnpul1'
ID 641854
Institutional Source Beutler Lab
Gene Symbol Hnrnpul1
Ensembl Gene ENSMUSG00000040725
Gene Name heterogeneous nuclear ribonucleoprotein U-like 1
Synonyms E130317O14Rik, Hnrpul1, Hnrnpul, E1B-AP5, E1BAP5
MMRRC Submission 067856-MU
Accession Numbers
Essential gene? Possibly essential (E-score: 0.621) question?
Stock # R8319 (G1)
Quality Score 225.009
Status Not validated
Chromosome 7
Chromosomal Location 25420590-25454182 bp(-) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) A to T at 25453902 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Aspartic acid to Glutamic Acid at position 53 (D53E)
Ref Sequence ENSEMBL: ENSMUSP00000146263 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000002677] [ENSMUST00000043765] [ENSMUST00000085948] [ENSMUST00000108401] [ENSMUST00000206832]
AlphaFold Q8VDM6
Predicted Effect probably benign
Transcript: ENSMUST00000002677
SMART Domains Protein: ENSMUSP00000002677
Gene: ENSMUSG00000002602

DomainStartEndE-ValueType
signal peptide 1 19 N/A INTRINSIC
IG 35 124 5.53e-6 SMART
IG 139 218 9.06e-2 SMART
FN3 219 312 9.25e-6 SMART
FN3 328 409 2.18e-2 SMART
transmembrane domain 444 466 N/A INTRINSIC
low complexity region 489 501 N/A INTRINSIC
TyrKc 530 797 1.91e-134 SMART
Predicted Effect probably benign
Transcript: ENSMUST00000043765
SMART Domains Protein: ENSMUSP00000037268
Gene: ENSMUSG00000040725

DomainStartEndE-ValueType
SAP 3 37 2.86e-10 SMART
low complexity region 62 74 N/A INTRINSIC
low complexity region 78 91 N/A INTRINSIC
low complexity region 201 209 N/A INTRINSIC
SPRY 255 388 8.49e-41 SMART
Pfam:AAA_33 424 569 1.4e-29 PFAM
low complexity region 613 626 N/A INTRINSIC
low complexity region 631 693 N/A INTRINSIC
low complexity region 695 718 N/A INTRINSIC
low complexity region 745 765 N/A INTRINSIC
low complexity region 768 859 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000085948
SMART Domains Protein: ENSMUSP00000083110
Gene: ENSMUSG00000002602

DomainStartEndE-ValueType
signal peptide 1 19 N/A INTRINSIC
IG 35 124 5.53e-6 SMART
IG 139 218 9.06e-2 SMART
FN3 219 312 9.25e-6 SMART
FN3 328 409 2.18e-2 SMART
transmembrane domain 435 457 N/A INTRINSIC
low complexity region 480 492 N/A INTRINSIC
TyrKc 521 788 1.91e-134 SMART
Predicted Effect probably benign
Transcript: ENSMUST00000108401
AA Change: D53E

PolyPhen 2 Score 0.000 (Sensitivity: 1.00; Specificity: 0.00)
SMART Domains Protein: ENSMUSP00000104038
Gene: ENSMUSG00000040725
AA Change: D53E

DomainStartEndE-ValueType
SAP 3 37 2.86e-10 SMART
low complexity region 62 74 N/A INTRINSIC
low complexity region 78 91 N/A INTRINSIC
low complexity region 201 209 N/A INTRINSIC
Pfam:SPRY 255 338 2e-13 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000206832
AA Change: D53E

PolyPhen 2 Score 0.000 (Sensitivity: 1.00; Specificity: 0.00)
Coding Region Coverage
  • 1x: 100.0%
  • 3x: 99.9%
  • 10x: 99.7%
  • 20x: 99.1%
Validation Efficiency
MGI Phenotype FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes a nuclear RNA-binding protein of the heterogeneous nuclear ribonucleoprotein (hnRNP) family. This protein binds specifically to adenovirus early-1B-55kDa oncoprotein. It may play an important role in nucleocytoplasmic RNA transport, and its function is modulated by early-1B-55kDa in adenovirus-infected cells. [provided by RefSeq, Mar 2016]
Allele List at MGI
Other mutations in this stock
Total: 50 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
4921517D22Rik A T 13: 59,838,486 (GRCm39) D115E probably benign Het
Abcc1 T A 16: 14,214,315 (GRCm39) L197Q probably damaging Het
Adamts14 T G 10: 61,057,706 (GRCm39) N547T probably benign Het
Ampd3 T A 7: 110,394,982 (GRCm39) S301R probably benign Het
Atg9a G A 1: 75,162,342 (GRCm39) Q523* probably null Het
Atl1 A T 12: 70,002,093 (GRCm39) T351S probably damaging Het
Bhlhe40 TG TGG 6: 108,641,818 (GRCm39) 254 probably null Het
Cacna1c T C 6: 118,614,735 (GRCm39) I1315V Het
Col12a1 C T 9: 79,555,979 (GRCm39) G2013R probably damaging Het
Cpne2 A G 8: 95,280,040 (GRCm39) D153G probably benign Het
Cryzl1 T C 16: 91,489,251 (GRCm39) S205G probably benign Het
Cux1 C T 5: 136,594,251 (GRCm39) A5T probably benign Het
Ddx60 T C 8: 62,395,669 (GRCm39) probably null Het
Dnajc13 G A 9: 104,067,590 (GRCm39) P1190S probably benign Het
Fbxw7 T A 3: 84,881,859 (GRCm39) V526E Het
Fig4 C A 10: 41,139,097 (GRCm39) G369C probably damaging Het
Gabra1 C T 11: 42,026,315 (GRCm39) A326T probably damaging Het
Gbe1 G A 16: 70,284,964 (GRCm39) G429S probably benign Het
Gtf3c5 A T 2: 28,460,506 (GRCm39) H364Q probably benign Het
Hcfc2 T A 10: 82,574,201 (GRCm39) I125N probably damaging Het
Ift56 T A 6: 38,382,880 (GRCm39) H338Q probably damaging Het
Il18 A T 9: 50,492,818 (GRCm39) D128V possibly damaging Het
Intu T A 3: 40,608,202 (GRCm39) S71R probably damaging Het
Klhl6 T C 16: 19,775,940 (GRCm39) E206G possibly damaging Het
Lcor T A 19: 41,571,343 (GRCm39) S179T probably damaging Het
Mcub A G 3: 129,727,328 (GRCm39) F93L probably damaging Het
Mdga2 T C 12: 67,267,803 (GRCm39) Y5C unknown Het
Naip1 C A 13: 100,565,721 (GRCm39) V354L probably benign Het
Naip5 A G 13: 100,358,167 (GRCm39) V1023A probably benign Het
Ndufaf1 A G 2: 119,490,568 (GRCm39) L166P probably damaging Het
Ninl A T 2: 150,801,827 (GRCm39) L147H probably damaging Het
Or4c12 A G 2: 89,774,024 (GRCm39) V145A possibly damaging Het
Or51b17 A G 7: 103,542,636 (GRCm39) I102T probably damaging Het
Otogl C T 10: 107,689,127 (GRCm39) probably null Het
Otulin AT ATT 15: 27,606,404 (GRCm39) probably null Het
Phf11b A C 14: 59,576,146 (GRCm39) L30R probably damaging Het
Prdm13 G T 4: 21,679,327 (GRCm39) H388N unknown Het
Pwwp2b T C 7: 138,835,099 (GRCm39) V180A probably damaging Het
Reep4 T A 14: 70,783,951 (GRCm39) S23T probably damaging Het
Rusc2 T A 4: 43,425,378 (GRCm39) L1161Q probably damaging Het
Scgb1b3 G A 7: 31,075,404 (GRCm39) probably null Het
Scn10a G T 9: 119,499,455 (GRCm39) N279K probably benign Het
Smurf2 A G 11: 106,715,578 (GRCm39) L643S probably damaging Het
Sox12 G A 2: 152,239,192 (GRCm39) P143S unknown Het
Specc1 C T 11: 62,009,501 (GRCm39) T339I possibly damaging Het
Tas2r139 T C 6: 42,118,720 (GRCm39) V284A probably benign Het
Thumpd3 T A 6: 113,040,107 (GRCm39) C330* probably null Het
Ttn A G 2: 76,537,298 (GRCm39) S34877P possibly damaging Het
Zfp568 T C 7: 29,697,629 (GRCm39) S104P possibly damaging Het
Zfp933 G A 4: 147,912,910 (GRCm39) H50Y possibly damaging Het
Other mutations in Hnrnpul1
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00095:Hnrnpul1 APN 7 25,425,579 (GRCm39) missense possibly damaging 0.74
IGL01287:Hnrnpul1 APN 7 25,426,323 (GRCm39) missense probably damaging 1.00
IGL01409:Hnrnpul1 APN 7 25,424,077 (GRCm39) missense unknown
IGL02026:Hnrnpul1 APN 7 25,444,587 (GRCm39) missense probably damaging 0.99
IGL02073:Hnrnpul1 APN 7 25,421,766 (GRCm39) unclassified probably benign
IGL02474:Hnrnpul1 APN 7 25,426,182 (GRCm39) missense probably benign 0.02
IGL02839:Hnrnpul1 APN 7 25,432,667 (GRCm39) critical splice donor site probably null
IGL02894:Hnrnpul1 APN 7 25,450,329 (GRCm39) missense possibly damaging 0.70
IGL03382:Hnrnpul1 APN 7 25,450,409 (GRCm39) start codon destroyed probably null 0.53
R0011:Hnrnpul1 UTSW 7 25,442,340 (GRCm39) splice site probably benign
R0525:Hnrnpul1 UTSW 7 25,440,308 (GRCm39) missense possibly damaging 0.72
R0587:Hnrnpul1 UTSW 7 25,444,657 (GRCm39) missense possibly damaging 0.70
R1121:Hnrnpul1 UTSW 7 25,440,332 (GRCm39) missense possibly damaging 0.68
R1313:Hnrnpul1 UTSW 7 25,422,341 (GRCm39) unclassified probably benign
R1313:Hnrnpul1 UTSW 7 25,422,341 (GRCm39) unclassified probably benign
R1880:Hnrnpul1 UTSW 7 25,432,523 (GRCm39) missense possibly damaging 0.95
R1892:Hnrnpul1 UTSW 7 25,426,191 (GRCm39) missense probably benign 0.11
R2113:Hnrnpul1 UTSW 7 25,432,694 (GRCm39) missense possibly damaging 0.47
R2194:Hnrnpul1 UTSW 7 25,425,347 (GRCm39) critical splice donor site probably null
R2269:Hnrnpul1 UTSW 7 25,450,299 (GRCm39) missense probably damaging 0.98
R2679:Hnrnpul1 UTSW 7 25,426,300 (GRCm39) missense probably damaging 1.00
R3079:Hnrnpul1 UTSW 7 25,432,540 (GRCm39) nonsense probably null
R3917:Hnrnpul1 UTSW 7 25,426,300 (GRCm39) missense probably damaging 1.00
R4077:Hnrnpul1 UTSW 7 25,426,300 (GRCm39) missense probably damaging 1.00
R4079:Hnrnpul1 UTSW 7 25,426,300 (GRCm39) missense probably damaging 1.00
R4181:Hnrnpul1 UTSW 7 25,426,237 (GRCm39) missense probably damaging 0.98
R4449:Hnrnpul1 UTSW 7 25,421,709 (GRCm39) unclassified probably benign
R4707:Hnrnpul1 UTSW 7 25,426,258 (GRCm39) missense probably damaging 1.00
R4764:Hnrnpul1 UTSW 7 25,442,436 (GRCm39) missense probably benign 0.00
R5040:Hnrnpul1 UTSW 7 25,442,414 (GRCm39) missense possibly damaging 0.86
R5131:Hnrnpul1 UTSW 7 25,426,219 (GRCm39) missense probably benign 0.08
R5224:Hnrnpul1 UTSW 7 25,444,600 (GRCm39) missense probably damaging 0.98
R5599:Hnrnpul1 UTSW 7 25,454,097 (GRCm39) start gained probably benign
R5975:Hnrnpul1 UTSW 7 25,453,784 (GRCm39) missense possibly damaging 0.93
R7032:Hnrnpul1 UTSW 7 25,450,319 (GRCm39) missense probably benign 0.11
R7195:Hnrnpul1 UTSW 7 25,424,203 (GRCm39) missense unknown
R7231:Hnrnpul1 UTSW 7 25,447,842 (GRCm39) nonsense probably null
R7667:Hnrnpul1 UTSW 7 25,453,846 (GRCm39) missense probably damaging 0.99
R8017:Hnrnpul1 UTSW 7 25,447,889 (GRCm39) missense probably benign 0.03
R8060:Hnrnpul1 UTSW 7 25,447,768 (GRCm39) missense possibly damaging 0.54
R8356:Hnrnpul1 UTSW 7 25,422,247 (GRCm39) unclassified probably benign
Z1176:Hnrnpul1 UTSW 7 25,424,123 (GRCm39) missense unknown
Z1176:Hnrnpul1 UTSW 7 25,424,089 (GRCm39) missense probably benign 0.23
Predicted Primers PCR Primer
(F):5'- TCTCCTGGATCTCTGTGGAGTC -3'
(R):5'- TCCTGACAGGCAAGGTTTAGGG -3'

Sequencing Primer
(F):5'- ATCTCTGTGGAGTCGAGCTC -3'
(R):5'- ACAGAGCCCTGGGAGGC -3'
Posted On 2020-07-28