Incidental Mutation 'R0048:Vmn1r67'
ID |
64245 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Vmn1r67
|
Ensembl Gene |
ENSMUSG00000046716 |
Gene Name |
vomeronasal 1 receptor 67 |
Synonyms |
V1re10 |
MMRRC Submission |
038342-MU
|
Accession Numbers |
|
Essential gene? |
Probably non essential
(E-score: 0.079)
|
Stock # |
R0048 (G1)
|
Quality Score |
131 |
Status
|
Validated
|
Chromosome |
7 |
Chromosomal Location |
10180716-10181714 bp(+) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
G to A
at 10180793 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Glycine to Glutamic Acid
at position 19
(G19E)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000060746
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000055964]
[ENSMUST00000226237]
|
AlphaFold |
G5E8C1 |
Predicted Effect |
probably damaging
Transcript: ENSMUST00000055964
AA Change: G19E
PolyPhen 2
Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
|
SMART Domains |
Protein: ENSMUSP00000060746 Gene: ENSMUSG00000046716 AA Change: G19E
Domain | Start | End | E-Value | Type |
Pfam:V1R
|
34 |
292 |
4.3e-31 |
PFAM |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000226237
|
Meta Mutation Damage Score |
0.6467 |
Coding Region Coverage |
- 1x: 99.4%
- 3x: 98.9%
- 10x: 97.9%
- 20x: 96.3%
|
Validation Efficiency |
100% (37/37) |
Allele List at MGI |
|
Other mutations in this stock |
Total: 32 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
Adgrb3 |
A |
G |
1: 25,140,563 (GRCm39) |
I299T |
probably benign |
Het |
Ankrd12 |
A |
G |
17: 66,291,798 (GRCm39) |
S1212P |
probably damaging |
Het |
Ankrd50 |
A |
G |
3: 38,537,198 (GRCm39) |
S52P |
probably benign |
Het |
Brca1 |
A |
G |
11: 101,415,803 (GRCm39) |
V777A |
possibly damaging |
Het |
Cblif |
G |
A |
19: 11,727,120 (GRCm39) |
V110M |
possibly damaging |
Het |
Dppa2 |
A |
G |
16: 48,137,761 (GRCm39) |
M248V |
probably benign |
Het |
Fat2 |
G |
T |
11: 55,200,865 (GRCm39) |
H736Q |
probably benign |
Het |
Fgfr2 |
A |
T |
7: 129,782,218 (GRCm39) |
|
probably benign |
Het |
Hmcn2 |
T |
C |
2: 31,318,249 (GRCm39) |
S3865P |
possibly damaging |
Het |
Iqgap3 |
A |
T |
3: 88,023,256 (GRCm39) |
T516S |
probably benign |
Het |
Itpr2 |
T |
C |
6: 146,133,789 (GRCm39) |
|
probably null |
Het |
Lrrfip1 |
C |
T |
1: 91,021,369 (GRCm39) |
|
probably benign |
Het |
Mfsd12 |
G |
A |
10: 81,198,648 (GRCm39) |
V380I |
possibly damaging |
Het |
Mroh9 |
G |
A |
1: 162,890,056 (GRCm39) |
T227M |
probably damaging |
Het |
Mtor |
C |
T |
4: 148,623,338 (GRCm39) |
Q2063* |
probably null |
Het |
Nanos3 |
C |
T |
8: 84,902,763 (GRCm39) |
R133Q |
probably damaging |
Het |
Or13c3 |
C |
A |
4: 52,856,196 (GRCm39) |
A106S |
probably damaging |
Het |
Ptgfr |
A |
G |
3: 151,540,728 (GRCm39) |
V260A |
possibly damaging |
Het |
Raph1 |
T |
C |
1: 60,539,764 (GRCm39) |
K423E |
probably benign |
Het |
Rbm27 |
A |
G |
18: 42,431,529 (GRCm39) |
D112G |
probably benign |
Het |
Ryr2 |
T |
C |
13: 11,610,670 (GRCm39) |
E4052G |
probably damaging |
Het |
Sart3 |
G |
T |
5: 113,893,458 (GRCm39) |
D346E |
possibly damaging |
Het |
Siglec1 |
T |
C |
2: 130,915,317 (GRCm39) |
T1425A |
possibly damaging |
Het |
Snx25 |
A |
T |
8: 46,558,146 (GRCm39) |
|
probably benign |
Het |
Son |
T |
A |
16: 91,455,865 (GRCm39) |
H1537Q |
possibly damaging |
Het |
Tgfb1 |
T |
A |
7: 25,393,779 (GRCm39) |
|
probably benign |
Het |
Umodl1 |
A |
T |
17: 31,187,451 (GRCm39) |
N172Y |
probably damaging |
Het |
Urah |
C |
T |
7: 140,416,665 (GRCm39) |
T46I |
probably damaging |
Het |
Usp8 |
C |
T |
2: 126,579,809 (GRCm39) |
P353L |
probably damaging |
Het |
Vamp2 |
A |
G |
11: 68,980,585 (GRCm39) |
D51G |
possibly damaging |
Het |
Wdr76 |
C |
T |
2: 121,365,900 (GRCm39) |
|
probably benign |
Het |
Wwox |
C |
A |
8: 115,166,570 (GRCm39) |
P20Q |
probably damaging |
Het |
|
Other mutations in Vmn1r67 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL01690:Vmn1r67
|
APN |
7 |
10,180,767 (GRCm39) |
missense |
possibly damaging |
0.96 |
IGL02812:Vmn1r67
|
APN |
7 |
10,180,945 (GRCm39) |
missense |
probably benign |
0.01 |
IGL03121:Vmn1r67
|
APN |
7 |
10,181,394 (GRCm39) |
missense |
probably benign |
0.00 |
IGL03208:Vmn1r67
|
APN |
7 |
10,181,025 (GRCm39) |
missense |
possibly damaging |
0.94 |
PIT4142001:Vmn1r67
|
UTSW |
7 |
10,180,877 (GRCm39) |
missense |
probably benign |
0.13 |
R0549:Vmn1r67
|
UTSW |
7 |
10,181,641 (GRCm39) |
missense |
probably damaging |
1.00 |
R1595:Vmn1r67
|
UTSW |
7 |
10,181,597 (GRCm39) |
missense |
probably benign |
0.18 |
R1608:Vmn1r67
|
UTSW |
7 |
10,180,907 (GRCm39) |
missense |
possibly damaging |
0.82 |
R2284:Vmn1r67
|
UTSW |
7 |
10,181,600 (GRCm39) |
missense |
probably damaging |
0.97 |
R3614:Vmn1r67
|
UTSW |
7 |
10,181,356 (GRCm39) |
missense |
probably damaging |
0.98 |
R4399:Vmn1r67
|
UTSW |
7 |
10,181,476 (GRCm39) |
missense |
possibly damaging |
0.89 |
R4542:Vmn1r67
|
UTSW |
7 |
10,181,357 (GRCm39) |
missense |
probably damaging |
0.99 |
R5216:Vmn1r67
|
UTSW |
7 |
10,181,090 (GRCm39) |
missense |
probably benign |
0.00 |
R5655:Vmn1r67
|
UTSW |
7 |
10,181,315 (GRCm39) |
missense |
probably benign |
0.43 |
R5837:Vmn1r67
|
UTSW |
7 |
10,180,949 (GRCm39) |
missense |
probably benign |
0.26 |
R6526:Vmn1r67
|
UTSW |
7 |
10,181,598 (GRCm39) |
missense |
probably benign |
0.05 |
R6735:Vmn1r67
|
UTSW |
7 |
10,181,138 (GRCm39) |
missense |
probably damaging |
1.00 |
R6846:Vmn1r67
|
UTSW |
7 |
10,180,840 (GRCm39) |
missense |
probably benign |
0.04 |
R7086:Vmn1r67
|
UTSW |
7 |
10,181,044 (GRCm39) |
missense |
possibly damaging |
0.93 |
R7227:Vmn1r67
|
UTSW |
7 |
10,181,475 (GRCm39) |
nonsense |
probably null |
|
R7594:Vmn1r67
|
UTSW |
7 |
10,181,342 (GRCm39) |
missense |
possibly damaging |
0.95 |
R7608:Vmn1r67
|
UTSW |
7 |
10,181,290 (GRCm39) |
missense |
possibly damaging |
0.89 |
R7797:Vmn1r67
|
UTSW |
7 |
10,180,903 (GRCm39) |
missense |
probably benign |
0.30 |
R8681:Vmn1r67
|
UTSW |
7 |
10,181,128 (GRCm39) |
missense |
probably benign |
0.30 |
|
Predicted Primers |
PCR Primer
(F):5'- ACCCCTCTGATTTAGCCTCAGTAGC -3'
(R):5'- GCACCCAATGTACTTTGCAGCATTC -3'
Sequencing Primer
(F):5'- GATTTAGCCTCAGTAGCTCTTCAG -3'
(R):5'- CCTTAAAGCAGGATTTCCTGTGAC -3'
|
Posted On |
2013-08-06 |