Incidental Mutation 'BB008:Vmn1r233'
ID 642492
Institutional Source Beutler Lab
Gene Symbol Vmn1r233
Ensembl Gene ENSMUSG00000045575
Gene Name vomeronasal 1 receptor 233
Synonyms V1rf5
Accession Numbers
Essential gene? Probably non essential (E-score: 0.054) question?
Stock # BB008
Quality Score 225.009
Status Not validated
Chromosome 17
Chromosomal Location 21213989-21214948 bp(-) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) G to A at 21214125 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Alanine to Valine at position 275 (A275V)
Ref Sequence ENSEMBL: ENSMUSP00000062473 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000056339]
AlphaFold Q8R294
Predicted Effect probably benign
Transcript: ENSMUST00000056339
AA Change: A275V

PolyPhen 2 Score 0.000 (Sensitivity: 1.00; Specificity: 0.00)
SMART Domains Protein: ENSMUSP00000062473
Gene: ENSMUSG00000045575
AA Change: A275V

DomainStartEndE-ValueType
Pfam:TAS2R 8 304 4.8e-11 PFAM
Pfam:7tm_1 11 297 7.9e-7 PFAM
Pfam:V1R 40 303 1.3e-24 PFAM
Coding Region Coverage
  • 1x: 100.0%
  • 3x: 99.9%
  • 10x: 99.6%
  • 20x: 98.6%
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 47 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Acp2 A T 2: 91,037,060 (GRCm39) probably null Het
Aire G A 10: 77,866,130 (GRCm39) A536V probably damaging Het
Aox4 A G 1: 58,294,645 (GRCm39) I951M probably benign Het
Ash1l G T 3: 88,950,848 (GRCm39) C2190F probably damaging Het
C1s1 C T 6: 124,510,359 (GRCm39) V363M probably damaging Het
Diaph3 A T 14: 87,352,456 (GRCm39) D48E possibly damaging Het
Dnajc13 A G 9: 104,095,763 (GRCm39) V559A probably benign Het
Dzank1 T C 2: 144,323,614 (GRCm39) I610V probably benign Het
F7 A G 8: 13,085,209 (GRCm39) I412V probably benign Het
Flt1 A G 5: 147,525,382 (GRCm39) S919P probably damaging Het
Igkv4-70 C A 6: 69,244,975 (GRCm39) R82L probably damaging Het
Lnp1 T A 16: 56,748,281 (GRCm39) R4* probably null Het
Lrrc3b T C 14: 15,358,018 (GRCm38) N196S probably benign Het
Mlxip A G 5: 123,588,558 (GRCm39) D816G probably damaging Het
Myh7 C T 14: 55,221,119 (GRCm39) E935K possibly damaging Het
Myom3 A T 4: 135,516,947 (GRCm39) H839L probably benign Het
Nebl C T 2: 17,381,433 (GRCm39) probably null Het
Ninj1 T C 13: 49,347,432 (GRCm39) I99T probably damaging Het
Or11g1 A C 14: 50,651,786 (GRCm39) M262L probably damaging Het
Or2l5 A G 16: 19,334,258 (GRCm39) S43P possibly damaging Het
Or4a76 T A 2: 89,460,448 (GRCm39) I265F possibly damaging Het
Or8g55 A T 9: 39,785,146 (GRCm39) T192S possibly damaging Het
Otop1 A G 5: 38,445,364 (GRCm39) H174R probably damaging Het
Pcdhb16 A G 18: 37,611,510 (GRCm39) N157D possibly damaging Het
Prss44 A C 9: 110,643,746 (GRCm39) Q130P probably damaging Het
Ptpn4 T A 1: 119,607,925 (GRCm39) M712L probably damaging Het
Ptprh C A 7: 4,574,987 (GRCm39) S344I probably benign Het
Rps6kl1 T C 12: 85,196,566 (GRCm39) I33V possibly damaging Het
Scn1a T C 2: 66,148,156 (GRCm39) S110G probably damaging Het
Sdk2 C A 11: 113,784,267 (GRCm39) K157N possibly damaging Het
Serpina1d A T 12: 103,733,815 (GRCm39) V163D probably damaging Het
Serpina3g T C 12: 104,205,428 (GRCm39) S56P probably benign Het
Slc4a4 T C 5: 89,318,640 (GRCm39) L636P probably benign Het
Slc6a1 T C 6: 114,288,863 (GRCm39) F474S probably benign Het
Slco6d1 A G 1: 98,356,141 (GRCm39) D235G probably damaging Het
Srgn A T 10: 62,330,763 (GRCm39) M114K possibly damaging Het
Syne3 A T 12: 104,929,491 (GRCm39) V243E probably damaging Het
Tcf19 A G 17: 35,825,804 (GRCm39) F118L probably damaging Het
Tln2 A T 9: 67,165,742 (GRCm39) probably null Het
Tnxb A G 17: 34,907,672 (GRCm39) T1239A probably damaging Het
Traip A G 9: 107,848,241 (GRCm39) I453M probably benign Het
Vmn1r157 C T 7: 22,461,210 (GRCm39) A30V probably damaging Het
Vps13d G A 4: 144,822,854 (GRCm39) R2976* probably null Het
Wdr75 T C 1: 45,858,795 (GRCm39) F655L probably benign Het
Wwp1 A G 4: 19,650,114 (GRCm39) probably null Het
Zc3h4 T C 7: 16,166,909 (GRCm39) L747P unknown Het
Zfp268 G A 4: 145,349,126 (GRCm39) D188N possibly damaging Het
Other mutations in Vmn1r233
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01843:Vmn1r233 APN 17 21,214,861 (GRCm39) missense probably damaging 1.00
IGL01912:Vmn1r233 APN 17 21,214,467 (GRCm39) missense probably benign 0.02
IGL02642:Vmn1r233 APN 17 21,214,291 (GRCm39) missense probably damaging 0.97
IGL02730:Vmn1r233 APN 17 21,214,057 (GRCm39) missense possibly damaging 0.81
IGL02754:Vmn1r233 APN 17 21,214,886 (GRCm39) missense probably benign
IGL02754:Vmn1r233 APN 17 21,214,887 (GRCm39) missense probably benign 0.37
BB018:Vmn1r233 UTSW 17 21,214,125 (GRCm39) missense probably benign
R0368:Vmn1r233 UTSW 17 21,214,869 (GRCm39) missense possibly damaging 0.93
R1894:Vmn1r233 UTSW 17 21,213,994 (GRCm39) missense probably benign 0.02
R2507:Vmn1r233 UTSW 17 21,214,110 (GRCm39) missense probably benign 0.29
R4609:Vmn1r233 UTSW 17 21,214,677 (GRCm39) missense possibly damaging 0.79
R4662:Vmn1r233 UTSW 17 21,214,393 (GRCm39) missense probably benign 0.16
R4686:Vmn1r233 UTSW 17 21,214,368 (GRCm39) missense probably benign 0.33
R4721:Vmn1r233 UTSW 17 21,214,879 (GRCm39) missense probably benign
R5559:Vmn1r233 UTSW 17 21,214,839 (GRCm39) missense possibly damaging 0.74
R5651:Vmn1r233 UTSW 17 21,214,279 (GRCm39) missense probably benign 0.00
R6642:Vmn1r233 UTSW 17 21,214,002 (GRCm39) missense probably damaging 1.00
R7285:Vmn1r233 UTSW 17 21,214,221 (GRCm39) missense probably damaging 1.00
R7931:Vmn1r233 UTSW 17 21,214,125 (GRCm39) missense probably benign
R7936:Vmn1r233 UTSW 17 21,214,237 (GRCm39) nonsense probably null
R7984:Vmn1r233 UTSW 17 21,214,417 (GRCm39) missense probably damaging 0.99
R8059:Vmn1r233 UTSW 17 21,214,698 (GRCm39) missense probably benign 0.06
R9422:Vmn1r233 UTSW 17 21,214,069 (GRCm39) missense possibly damaging 0.77
Z1176:Vmn1r233 UTSW 17 21,214,920 (GRCm39) missense probably damaging 0.98
Predicted Primers PCR Primer
(F):5'- CTCCACAGTCACTTGTCATGAC -3'
(R):5'- CCCTGTATAGGCACAAGCAAAG -3'

Sequencing Primer
(F):5'- CACAGTCACTTGTCATGACTATTAC -3'
(R):5'- ATGCAACAAATGCCCAGG -3'
Posted On 2020-08-01