Mutagenetix > Incidental Mutation

Incidental Mutation 'R8025:Rbpjl'

643746

Institutional Source

Beutler Lab

Gene Symbol

Rbpjl

Ensembl Gene

ENSMUSG00000017007

Gene Name

recombination signal binding protein for immunoglobulin kappa J region-like

Synonyms

Rbpsuhl, RBP-J kappa-like, RBP-L

MMRRC Submission

067464-MU

Accession Numbers

Essential gene?

Non essential (E-score: 0.000) question?

Stock #

R8025 (G1)

Quality Score

225.009

Status

Validated

Chromosome

Chromosomal Location

164245061-164257368 bp(+) (GRCm39)

Type of Mutation

splice site

DNA Base Change (assembly)

C to A at 164252166 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Ref Sequence

ENSEMBL: ENSMUSP00000017151 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000017151]

AlphaFold

O08674

Predicted Effect

probably benign
Transcript: ENSMUST00000017151

SMART Domains

Protein: ENSMUSP00000017151
Gene: ENSMUSG00000017007

Domain	Start	End	E-Value	Type
LAG1_DNAbind	66	204	4.58e-78	SMART
BTD	205	357	1.23e-83	SMART
SCOP:d1a02n1	383	475	3e-22	SMART

Meta Mutation Damage Score

0.0846

Coding Region Coverage

1x: 100.0%
3x: 99.9%
10x: 99.6%
20x: 98.8%

Validation Efficiency

100% (61/61)

MGI Phenotype

FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes a member of the suppressor of hairless protein family. A similar protein in mouse is a transcription factor that binds to DNA sequences almost identical to that bound by the Notch receptor signaling pathway transcription factor recombining binding protein J. The mouse protein has been shown to activate transcription in concert with Epstein-Barr virus nuclear antigen-2. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Jul 2013]
PHENOTYPE: Mice homozygous for disruptions in this gene do not display any obvious phenotype abnormalities. [provided by MGI curators]

Allele List at MGI

Other mutations in this stock

Total: 63 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
4930579G24Rik	T	G	3: 79,536,635 (GRCm39)	L51R	probably damaging	Het
Actl7b	T	C	4: 56,741,137 (GRCm39)	T74A	probably damaging	Het
Aip	C	A	19: 4,165,346 (GRCm39)	A207S	probably benign	Het
AL732309.1	A	G	2: 25,136,331 (GRCm39)		probably benign	Het
Apcdd1	G	T	18: 63,069,979 (GRCm39)	C82F	probably damaging	Het
Arhgap42	T	G	9: 9,005,823 (GRCm39)	I736L	probably benign	Het
Baz1a	A	T	12: 54,955,921 (GRCm39)	I1056N	probably benign	Het
Bzw2	T	C	12: 36,157,517 (GRCm39)	E316G	probably damaging	Het
Carns1	A	T	19: 4,216,505 (GRCm39)	I559N	probably damaging	Het
Chrnb2	A	T	3: 89,668,649 (GRCm39)	V222E	probably damaging	Het
Cngb3	A	T	4: 19,280,960 (GRCm39)	N10Y	possibly damaging	Het
Dennd1b	A	G	1: 139,038,158 (GRCm39)	K267E		Het
Dhx32	A	G	7: 133,323,100 (GRCm39)	Y705H	probably damaging	Het
Dnah7c	G	A	1: 46,496,456 (GRCm39)	V114I	probably benign	Het
Dnah8	T	A	17: 30,960,311 (GRCm39)	C2229*	probably null	Het
Dync2i2	T	C	2: 29,938,730 (GRCm39)	Q51R	probably benign	Het
Gm14401	T	C	2: 176,778,249 (GRCm39)	F112L	probably damaging	Het
Gm57858	C	A	3: 36,073,136 (GRCm39)	R382L	probably damaging	Het
Habp4	G	A	13: 64,322,645 (GRCm39)	R238H	probably benign	Het
Herpud1	A	G	8: 95,119,149 (GRCm39)	Y301C	probably damaging	Het
Itih5	G	A	2: 10,245,833 (GRCm39)	A641T	probably benign	Het
Kcns3	A	T	12: 11,141,846 (GRCm39)	N284K	probably damaging	Het
Mcrs1	G	A	15: 99,144,814 (GRCm39)	Q267*	probably null	Het
Midn	G	A	10: 79,991,126 (GRCm39)	A379T	probably benign	Het
Muc21	GTGCTGGATTCAGTGGTGGGCAGGGTGGGGGTAGAGCCTGAGCCACTGCTGGATGCAGTGGTGGTCAGGGTGGGTGTAGAGCCTGAGCCA	GTGCTGGATGCAGTGGTGGTCAGGGTGGGTGTAGAGCCTGAGCCA	17: 35,931,879 (GRCm39)		probably benign	Het
Odad2	A	T	18: 7,127,224 (GRCm39)	N996K	probably benign	Het
Or2d36	A	G	7: 106,746,930 (GRCm39)	M136V	possibly damaging	Het
Or4d2b	A	T	11: 87,779,777 (GRCm39)		probably null	Het
Or51f5	T	C	7: 102,424,463 (GRCm39)	V244A	probably benign	Het
Or5m11	A	T	2: 85,781,856 (GRCm39)	I150F	probably benign	Het
Or7e175	T	C	9: 20,048,928 (GRCm39)	V172A	probably benign	Het
Parpbp	T	C	10: 87,928,970 (GRCm39)	D490G	probably benign	Het
Pcbp2	T	A	15: 102,396,711 (GRCm39)	S262R	probably benign	Het
Pcdhgc5	T	C	18: 37,953,992 (GRCm39)	I422T	possibly damaging	Het
Pcsk5	T	A	19: 17,538,415 (GRCm39)		probably benign	Het
Plxna1	G	A	6: 89,308,254 (GRCm39)	R1278W	probably damaging	Het
Polr1c	A	G	17: 46,555,974 (GRCm39)	L162P	probably damaging	Het
Rasl2-9	A	G	7: 5,128,481 (GRCm39)	S150P	probably damaging	Het
Raver2	C	A	4: 100,960,162 (GRCm39)	S214*	probably null	Het
Rec114	T	G	9: 58,567,605 (GRCm39)	E127A	possibly damaging	Het
Recql5	C	A	11: 115,818,938 (GRCm39)	L209F	probably damaging	Het
Rgs11	T	C	17: 26,423,359 (GRCm39)		probably null	Het
Rgs3	C	A	4: 62,608,831 (GRCm39)	H366N	probably damaging	Het
Rnf148	C	T	6: 23,654,196 (GRCm39)	D267N	possibly damaging	Het
Scn1a	T	C	2: 66,148,557 (GRCm39)	N1007S	probably benign	Het
Sdcbp	A	G	4: 6,393,022 (GRCm39)	T220A	probably benign	Het
Sema5a	A	G	15: 32,548,928 (GRCm39)	N134S	probably benign	Het
Smg1	G	A	7: 117,806,212 (GRCm39)	Q210*	probably null	Het
Snx7	A	G	3: 117,626,526 (GRCm39)	V328A	probably benign	Het
Sult1c2	A	T	17: 54,138,837 (GRCm39)	S247T	probably benign	Het
Tceanc2	C	T	4: 106,996,997 (GRCm39)		probably null	Het
Tead3	T	C	17: 28,554,009 (GRCm39)	D141G	probably benign	Het
Tlcd5	T	A	9: 43,022,848 (GRCm39)	T169S	probably benign	Het
Ube3b	T	C	5: 114,546,270 (GRCm39)	M692T	probably damaging	Het
Vmn1r188	T	C	13: 22,272,084 (GRCm39)	F13L	probably benign	Het
Vmn2r3	A	G	3: 64,182,871 (GRCm39)	V276A	possibly damaging	Het
Vmn2r57	A	G	7: 41,076,183 (GRCm39)	I443T	probably benign	Het
Vps33a	T	C	5: 123,696,738 (GRCm39)	N305S	possibly damaging	Het
Vps33b	A	T	7: 79,940,094 (GRCm39)		probably benign	Het
Wdr72	T	A	9: 74,050,781 (GRCm39)	M91K	probably benign	Het
Xylb	T	C	9: 119,210,569 (GRCm39)	F351L	probably damaging	Het
Zan	C	T	5: 137,404,614 (GRCm39)	D3883N	unknown	Het
Zfp82	T	A	7: 29,756,278 (GRCm39)	H268L	probably damaging	Het

Other mutations in Rbpjl

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01625:Rbpjl	APN	2	164,249,705 (GRCm39)	missense	possibly damaging	0.74
IGL02429:Rbpjl	APN	2	164,255,815 (GRCm39)	missense	possibly damaging	0.80
R2155:Rbpjl	UTSW	2	164,256,343 (GRCm39)	missense	possibly damaging	0.80
R2244:Rbpjl	UTSW	2	164,245,137 (GRCm39)	intron	probably benign
R2344:Rbpjl	UTSW	2	164,256,312 (GRCm39)	missense	probably damaging	0.99
R4721:Rbpjl	UTSW	2	164,246,447 (GRCm39)	missense	probably benign	0.08
R5023:Rbpjl	UTSW	2	164,252,209 (GRCm39)	missense	probably damaging	1.00
R5492:Rbpjl	UTSW	2	164,256,330 (GRCm39)	frame shift	probably null
R5493:Rbpjl	UTSW	2	164,256,330 (GRCm39)	frame shift	probably null
R5494:Rbpjl	UTSW	2	164,256,330 (GRCm39)	frame shift	probably null
R5556:Rbpjl	UTSW	2	164,249,982 (GRCm39)	missense	probably benign	0.01
R5796:Rbpjl	UTSW	2	164,252,168 (GRCm39)	splice site	probably benign
R6164:Rbpjl	UTSW	2	164,252,799 (GRCm39)	missense	probably damaging	1.00
R7609:Rbpjl	UTSW	2	164,247,734 (GRCm39)	missense	probably benign	0.05
R8068:Rbpjl	UTSW	2	164,250,438 (GRCm39)	missense	possibly damaging	0.93
R8251:Rbpjl	UTSW	2	164,255,854 (GRCm39)	missense	probably damaging	0.99
R8928:Rbpjl	UTSW	2	164,250,313 (GRCm39)	missense	probably damaging	1.00

Predicted Primers

PCR Primer
(F):5'- CCAGCTCACATCACTGAAGGATG -3'
(R):5'- ACTATGCTAACACACGGAGC -3'

Sequencing Primer
(F):5'- CACTGAAGGATGTTCATTTGTACCAG -3'
(R):5'- TAACACACGGAGCACCCAG -3'

Posted On

2020-08-12