Mutagenetix > Incidental Mutation

Incidental Mutation 'R8347:Vmn1r223'

645322

Institutional Source

Beutler Lab

Gene Symbol

Vmn1r223

Ensembl Gene

ENSMUSG00000069280

Gene Name

vomeronasal 1 receptor 223

Synonyms

Gm11330

MMRRC Submission

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.053) question?

Stock #

R8347 (G1)

Quality Score

225.009

Status

Not validated

Chromosome

Chromosomal Location

23249238-23250323 bp(+) (GRCm38)

Type of Mutation

missense

DNA Base Change (assembly)

T to C at 23249850 bp (GRCm38)

Zygosity

Heterozygous

Amino Acid Change

Serine to Proline at position 205 (S205P)

Ref Sequence

ENSEMBL: ENSMUSP00000089312 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000091719]

AlphaFold

Q5SSA0

Predicted Effect

probably damaging
Transcript: ENSMUST00000091719
AA Change: S205P

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)

SMART Domains

Protein: ENSMUSP00000089312
Gene: ENSMUSG00000069280
AA Change: S205P

Domain	Start	End	E-Value	Type
low complexity region	46	59	N/A	INTRINSIC
Pfam:TAS2R	63	355	6.6e-10	PFAM
Pfam:V1R	94	357	2.1e-39	PFAM

Coding Region Coverage

1x: 100.0%
3x: 99.9%
10x: 99.7%
20x: 98.9%

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 69 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
1700014D04Rik	T	A	13: 59,742,236	D590V	possibly damaging	Het
1700123K08Rik	T	A	5: 138,562,891	I170L	probably benign	Het
Adamts15	C	T	9: 30,902,550	R773Q	probably benign	Het
Ankib1	A	G	5: 3,747,065	L249P	probably damaging	Het
Cabin1	A	G	10: 75,742,367	F499L	probably damaging	Het
Clec12b	C	T	6: 129,380,487		probably null	Het
Col23a1	G	A	11: 51,571,256	G373D	probably damaging	Het
Cse1l	C	T	2: 166,927,585	T304I	possibly damaging	Het
D6Wsu163e	T	A	6: 126,955,288	L330*	probably null	Het
Dbi	A	C	1: 120,120,820	L32R	possibly damaging	Het
Dennd2c	A	G	3: 103,157,709	Y716C	probably damaging	Het
Dnah5	G	A	15: 28,236,666	M379I	possibly damaging	Het
Dpys	T	C	15: 39,857,313	D17G	probably benign	Het
Dync2h1	C	T	9: 7,116,578	S2319N	possibly damaging	Het
Dyrk2	T	C	10: 118,859,983	K457E	probably damaging	Het
Efs	A	G	14: 54,919,784	C357R	probably benign	Het
Egfr	T	A	11: 16,878,174	W516R	probably damaging	Het
Folh1	T	A	7: 86,729,118	R529*	probably null	Het
Fsip2	A	C	2: 82,987,854	I4644L	probably benign	Het
Garnl3	T	C	2: 33,085,891	Y66C	probably damaging	Het
Gli3	T	C	13: 15,723,525	L730P	probably damaging	Het
Gm19668	T	C	10: 77,798,387	*249W	probably null	Het
Gm28710	G	A	5: 16,801,574	M96I	probably benign	Het
Ighv2-6-8	T	C	12: 113,796,327	D54G	probably benign	Het
Irs2	C	A	8: 11,008,000	S144I	possibly damaging	Het
Itgb5	T	C	16: 33,940,678	C628R	probably damaging	Het
Kcnh4	A	T	11: 100,757,749	V43D	probably damaging	Het
Krtap16-3	A	T	16: 88,962,619	Y69N	unknown	Het
Lcn12	A	C	2: 25,492,033	D176E	possibly damaging	Het
Lilr4b	T	A	10: 51,481,754	F181L	probably damaging	Het
Med13l	T	A	5: 118,742,597	H1251Q	probably benign	Het
Nppb	C	A	4: 147,986,299	L44M	probably damaging	Het
Nutm2	T	C	13: 50,472,337	V320A	probably benign	Het
Olfr1272	A	T	2: 90,281,676	W300R	probably benign	Het
Olfr291	C	T	7: 84,856,755	P131S	probably damaging	Het
Olfr628	A	G	7: 103,731,943	S6G	probably benign	Het
Olfr987	T	A	2: 85,331,703	H65L	probably damaging	Het
Padi6	T	C	4: 140,735,408	M301V	probably benign	Het
Pappa	G	A	4: 65,327,065	R1530Q	probably damaging	Het
Pcgf6	C	T	19: 47,045,838	D255N	possibly damaging	Het
Pgap3	TCAGCAGCAGCAGCAGCAG	TCAGCAGCAGCAGCAG	11: 98,390,749		probably benign	Het
Phip	A	G	9: 82,908,763	I710T	probably benign	Het
Pla2r1	A	T	2: 60,534,903	Y108N	probably damaging	Het
Plat	G	T	8: 22,772,232	G91W	probably damaging	Het
Rint1	C	G	5: 23,811,772	L512V	probably damaging	Het
Sdad1	A	C	5: 92,298,229	F282L	probably benign	Het
Sirt5	G	T	13: 43,380,501	A189S	probably benign	Het
Slc14a1	T	C	18: 78,111,431	T247A	probably benign	Het
Slc22a6	C	G	19: 8,621,805	R267G	probably damaging	Het
Slfn3	A	G	11: 83,213,589	K429E	possibly damaging	Het
Spag17	T	C	3: 100,027,641	F721S	probably benign	Het
St3gal1	G	A	15: 67,113,662	R48C	probably damaging	Het
Sult2a6	A	G	7: 14,225,958	Y217H	probably benign	Het
Synj2	A	G	17: 6,009,785	N394S	probably damaging	Het
Telo2	A	T	17: 25,104,637	Y605*	probably null	Het
Trank1	T	A	9: 111,367,249	L1447Q	probably damaging	Het
Trim56	A	G	5: 137,112,592	L690P	probably damaging	Het
Trmt13	T	C	3: 116,582,768	T325A	probably benign	Het
Ttn	T	A	2: 76,709,467	T34392S	probably benign	Het
Uncx	A	G	5: 139,546,816	E212G	probably damaging	Het
Ush2a	A	G	1: 188,947,084	T4830A	probably benign	Het
Usp34	C	A	11: 23,412,345	T1616N		Het
Vars	C	T	17: 35,015,977	L1261F	possibly damaging	Het
Vmn2r118	A	T	17: 55,610,423	I363K	possibly damaging	Het
Vmn2r69	A	T	7: 85,415,630	M16K	probably benign	Het
Wdr62	G	A	7: 30,262,703	T428I	possibly damaging	Het
Yeats4	A	T	10: 117,217,469	L129Q	probably benign	Het
Zfp423	T	C	8: 87,783,156	R187G	probably damaging	Het
Zfp853	A	T	5: 143,288,947	L321Q	unknown	Het

Other mutations in Vmn1r223

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00661:Vmn1r223	APN	13	23250084	missense	probably damaging	1.00
IGL01016:Vmn1r223	APN	13	23250067	missense	probably damaging	1.00
IGL01353:Vmn1r223	APN	13	23249256	missense	unknown
IGL01941:Vmn1r223	APN	13	23250237	missense	possibly damaging	0.94
IGL02976:Vmn1r223	APN	13	23249995	missense	probably damaging	1.00
IGL03064:Vmn1r223	APN	13	23249983	missense	probably damaging	1.00
IGL03136:Vmn1r223	APN	13	23249763	missense	possibly damaging	0.81
PIT4812001:Vmn1r223	UTSW	13	23249890	missense	probably damaging	0.99
R1468:Vmn1r223	UTSW	13	23249868	missense	possibly damaging	0.81
R1468:Vmn1r223	UTSW	13	23249868	missense	possibly damaging	0.81
R1592:Vmn1r223	UTSW	13	23249667	missense	possibly damaging	0.57
R1640:Vmn1r223	UTSW	13	23250178	missense	probably damaging	1.00
R2116:Vmn1r223	UTSW	13	23249662	missense	probably damaging	1.00
R3076:Vmn1r223	UTSW	13	23250165	missense	probably benign	0.15
R4229:Vmn1r223	UTSW	13	23249415	missense	probably benign	0.08
R4230:Vmn1r223	UTSW	13	23249415	missense	probably benign	0.08
R5420:Vmn1r223	UTSW	13	23249505	missense	probably benign	0.02
R6412:Vmn1r223	UTSW	13	23249655	missense	probably benign	0.05
R6424:Vmn1r223	UTSW	13	23250175	missense	probably damaging	1.00
R6607:Vmn1r223	UTSW	13	23249749	missense	probably damaging	1.00
R6944:Vmn1r223	UTSW	13	23249313	missense	unknown
R7256:Vmn1r223	UTSW	13	23249866	missense	probably damaging	1.00
R8241:Vmn1r223	UTSW	13	23249812	missense	probably benign	0.38
R8315:Vmn1r223	UTSW	13	23250169	missense	probably damaging	1.00
R8975:Vmn1r223	UTSW	13	23250078	missense	possibly damaging	0.84
R9075:Vmn1r223	UTSW	13	23249430	missense	possibly damaging	0.50

Predicted Primers

PCR Primer
(F):5'- TCCTAGGTGATGTTGGTTGTAAAAC -3'
(R):5'- TAGAGGACACGCTTGTGATGC -3'

Sequencing Primer
(F):5'- AGGCTGTCACCATCAGT -3'
(R):5'- GACACGCTTGTGATGCTTATACAG -3'

Posted On

2020-09-02