Incidental Mutation 'R8359:Casc4'
ID645898
Institutional Source Beutler Lab
Gene Symbol Casc4
Ensembl Gene ENSMUSG00000060227
Gene Namecancer susceptibility candidate 4
SynonymsD130060C09Rik
Accession Numbers
Is this an essential gene? Non essential (E-score: 0.000) question?
Stock #R8359 (G1)
Quality Score187.009
Status Not validated
Chromosome2
Chromosomal Location121866970-121936220 bp(+) (GRCm38)
Type of Mutationstart gained
DNA Base Change (assembly) A to T at 121867151 bp
ZygosityHeterozygous
Amino Acid Change
Ref Sequence ENSEMBL: ENSMUSP00000106216 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000078752] [ENSMUST00000089912] [ENSMUST00000089915] [ENSMUST00000110586]
Predicted Effect probably benign
Transcript: ENSMUST00000078752
SMART Domains Protein: ENSMUSP00000077811
Gene: ENSMUSG00000060227

DomainStartEndE-ValueType
transmembrane domain 13 35 N/A INTRINSIC
coiled coil region 37 195 N/A INTRINSIC
low complexity region 400 418 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000089912
SMART Domains Protein: ENSMUSP00000087357
Gene: ENSMUSG00000060227

DomainStartEndE-ValueType
transmembrane domain 13 35 N/A INTRINSIC
coiled coil region 37 195 N/A INTRINSIC
low complexity region 367 385 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000089915
SMART Domains Protein: ENSMUSP00000087360
Gene: ENSMUSG00000060227

DomainStartEndE-ValueType
transmembrane domain 13 35 N/A INTRINSIC
coiled coil region 37 195 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000110586
SMART Domains Protein: ENSMUSP00000106216
Gene: ENSMUSG00000060227

DomainStartEndE-ValueType
transmembrane domain 13 35 N/A INTRINSIC
coiled coil region 37 195 N/A INTRINSIC
Coding Region Coverage
  • 1x: 100.0%
  • 3x: 99.9%
  • 10x: 99.7%
  • 20x: 99.0%
Validation Efficiency
MGI Phenotype FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] The increased expression level of this gene is associated with HER-2/neu proto-oncogene overexpression. Amplification and resulting overexpression of this proto-oncogene are found in approximately 30% of human breast and 20% of human ovarian cancers. Alternatively spliced variants encoding different isoforms have been identified for this gene. [provided by RefSeq, Dec 2010]
Allele List at MGI
Other mutations in this stock
Total: 53 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Adam5 A T 8: 24,806,486 V315D probably damaging Het
Adgrf1 A T 17: 43,310,395 I508F probably damaging Het
Atpaf2 T C 11: 60,407,303 D147G probably damaging Het
Brwd1 T C 16: 96,016,209 T1368A probably damaging Het
Cacna1s A T 1: 136,116,061 E1626V probably benign Het
Carm1 G A 9: 21,569,469 V80I possibly damaging Het
Cenpw T A 10: 30,198,488 D71V probably damaging Het
Ckmt1 A T 2: 121,363,050 T364S probably benign Het
Col6a4 T C 9: 106,068,384 S844G probably benign Het
Crybg1 T C 10: 43,992,542 E1380G probably benign Het
Cyp21a1 A G 17: 34,802,131 probably null Het
D430042O09Rik T C 7: 125,868,851 probably null Het
Dhodh A C 8: 109,606,406 D12E probably benign Het
Dnali1 T A 4: 125,063,667 T95S probably damaging Het
Dynlrb1 A G 2: 155,249,950 N93D probably benign Het
Edem1 C T 6: 108,846,813 A390V probably benign Het
Enthd1 T C 15: 80,474,155 D388G probably benign Het
Fam170a A G 18: 50,281,610 T108A probably damaging Het
Fryl A G 5: 73,075,933 S1531P probably benign Het
Hspbap1 C A 16: 35,824,996 N350K probably benign Het
Htr3b A C 9: 48,947,296 S94R probably damaging Het
Ide A T 19: 37,330,487 V42E Het
Igf2r A G 17: 12,683,861 V2434A probably benign Het
Kif16b G A 2: 142,711,857 A1007V probably benign Het
Mccc1 C T 3: 35,964,344 V614I probably benign Het
Mos A G 4: 3,871,097 Y240H probably damaging Het
Myh11 C T 16: 14,208,231 probably null Het
Nexn T A 3: 152,248,361 D166V probably damaging Het
Olfr328 G T 11: 58,552,203 T12N probably benign Het
Olfr510 T A 7: 108,668,311 N298K probably benign Het
Olfr55 G A 17: 33,176,921 C173Y probably damaging Het
Pkp4 A G 2: 59,350,551 Y1061C probably damaging Het
Pla2g6 T C 15: 79,287,170 D740G probably damaging Het
Pla2r1 T A 2: 60,443,283 I920L probably benign Het
Plekha2 A G 8: 25,088,391 I31T probably damaging Het
Ppp1r16b G T 2: 158,761,375 V407L probably benign Het
Prss50 A G 9: 110,862,302 I225V probably damaging Het
Rmdn2 A T 17: 79,628,151 E231V Het
Sema3c T C 5: 17,653,728 S42P possibly damaging Het
Slc22a20 T C 19: 5,971,526 I483V probably benign Het
Slc30a2 T C 4: 134,349,379 V275A probably damaging Het
Slc6a3 T A 13: 73,544,883 F207L probably benign Het
Slc9a1 A T 4: 133,420,616 Q648H probably damaging Het
Slpi A T 2: 164,356,055 M1K probably null Het
Smc5 A C 19: 23,234,079 S564A possibly damaging Het
Smchd1 A T 17: 71,431,243 F542L probably damaging Het
Sycp1 T A 3: 102,820,593 K901N probably damaging Het
Synpo2l T A 14: 20,666,140 T126S probably benign Het
Upp2 A G 2: 58,777,943 N216S probably benign Het
Wnk1 T C 6: 119,992,447 D349G probably damaging Het
Zfp180 C T 7: 24,104,912 A252V probably benign Het
Zfr2 C T 10: 81,242,819 T295I possibly damaging Het
Zkscan16 C T 4: 58,957,230 T504I possibly damaging Het
Other mutations in Casc4
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00089:Casc4 APN 2 121910793 splice site probably benign
IGL01020:Casc4 APN 2 121925722 missense probably benign 0.06
IGL01794:Casc4 APN 2 121911926 missense probably benign 0.36
IGL02429:Casc4 APN 2 121911987 missense probably benign 0.00
R0126:Casc4 UTSW 2 121906084 splice site probably benign
R0709:Casc4 UTSW 2 121867425 missense probably damaging 1.00
R2182:Casc4 UTSW 2 121867428 missense probably damaging 1.00
R4771:Casc4 UTSW 2 121925645 missense probably damaging 1.00
R5533:Casc4 UTSW 2 121925697 intron probably benign
R5817:Casc4 UTSW 2 121906044 missense probably benign 0.30
R6519:Casc4 UTSW 2 121906737 missense probably benign 0.31
R6598:Casc4 UTSW 2 121933485 missense probably damaging 1.00
R6598:Casc4 UTSW 2 121933486 missense probably damaging 1.00
R7799:Casc4 UTSW 2 121933541 missense probably benign 0.01
R8009:Casc4 UTSW 2 121906761 missense probably benign 0.00
R8360:Casc4 UTSW 2 121867151 start gained probably benign
Predicted Primers PCR Primer
(F):5'- GGACGAGAAGAAGCCCACTATC -3'
(R):5'- TCCTCCTGAAGCAGAACGTG -3'

Sequencing Primer
(F):5'- CCACTATCTCGCGAGAAGAGG -3'
(R):5'- TGGCGGGAGGAGATGCTC -3'
Posted On2020-09-02