Incidental Mutation 'R8367:Cc2d2b'
| ID |
646235 |
| Institutional Source |
Beutler Lab
|
| Gene Symbol |
Cc2d2b
|
| Ensembl Gene |
ENSMUSG00000108929 |
| Gene Name |
coiled-coil and C2 domain containing 2B |
| Synonyms |
EG668310 |
| MMRRC Submission |
067874-MU
|
| Accession Numbers |
|
| Essential gene? |
Probably non essential
(E-score: 0.091)
|
| Stock # |
R8367 (G1)
|
| Quality Score |
225.009 |
|
Status
|
Validated
|
| Chromosome |
19 |
| Chromosomal Location |
40737197-40816187 bp(+) (GRCm39) |
| Type of Mutation |
missense |
| DNA Base Change (assembly) |
A to G
at 40754419 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Methionine to Valine
at position 229
(M229V)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000146979
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000207801]
[ENSMUST00000224596]
|
| AlphaFold |
A0A286YDU8 |
| Predicted Effect |
unknown
Transcript: ENSMUST00000207801
AA Change: M229V
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000224596
AA Change: M229V
PolyPhen 2
Score 0.271 (Sensitivity: 0.91; Specificity: 0.88)
|
| Coding Region Coverage |
- 1x: 100.0%
- 3x: 99.9%
- 10x: 99.4%
- 20x: 98.0%
|
| Validation Efficiency |
100% (38/38) |
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 38 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| 6820408C15Rik |
G |
A |
2: 152,284,417 (GRCm39) |
|
probably null |
Het |
| 8030423J24Rik |
A |
T |
13: 71,032,096 (GRCm39) |
E56V |
unknown |
Het |
| Abcb1a |
A |
G |
5: 8,736,221 (GRCm39) |
T205A |
probably benign |
Het |
| Aplp2 |
T |
C |
9: 31,089,202 (GRCm39) |
E93G |
probably damaging |
Het |
| Arpin |
T |
A |
7: 79,579,386 (GRCm39) |
N79I |
possibly damaging |
Het |
| Atg7 |
T |
A |
6: 114,663,060 (GRCm39) |
D225E |
probably benign |
Het |
| Bltp3b |
T |
A |
10: 89,641,239 (GRCm39) |
D803E |
probably damaging |
Het |
| Cep295 |
C |
T |
9: 15,245,826 (GRCm39) |
V877I |
probably benign |
Het |
| Clca3a2 |
A |
T |
3: 144,523,508 (GRCm39) |
|
probably null |
Het |
| Cmip |
C |
T |
8: 118,163,610 (GRCm39) |
P359L |
probably benign |
Het |
| Cyb5rl |
A |
G |
4: 106,928,146 (GRCm39) |
Y94C |
probably benign |
Het |
| Cyp19a1 |
A |
G |
9: 54,087,543 (GRCm39) |
I125T |
probably damaging |
Het |
| Cyp2c54 |
T |
G |
19: 40,062,125 (GRCm39) |
Q44P |
probably damaging |
Het |
| Cyp2c67 |
A |
T |
19: 39,627,118 (GRCm39) |
H237Q |
probably benign |
Het |
| Dlgap2 |
A |
T |
8: 14,893,544 (GRCm39) |
Y953F |
probably benign |
Het |
| Hgfac |
G |
T |
5: 35,202,790 (GRCm39) |
C430F |
probably damaging |
Het |
| Kdm4b |
T |
C |
17: 56,662,875 (GRCm39) |
W149R |
probably damaging |
Het |
| Krt23 |
C |
T |
11: 99,383,715 (GRCm39) |
W59* |
probably null |
Het |
| Lfng |
G |
A |
5: 140,598,981 (GRCm39) |
E297K |
probably damaging |
Het |
| Lrrc7 |
T |
A |
3: 157,908,007 (GRCm39) |
Q271L |
possibly damaging |
Het |
| Ltc4s |
C |
A |
11: 50,127,511 (GRCm39) |
R108L |
possibly damaging |
Het |
| Mcm3ap |
T |
C |
10: 76,313,693 (GRCm39) |
S596P |
possibly damaging |
Het |
| Myot |
A |
G |
18: 44,470,166 (GRCm39) |
T48A |
probably benign |
Het |
| Mypn |
G |
C |
10: 62,971,539 (GRCm39) |
P834A |
probably damaging |
Het |
| Or5d16 |
T |
C |
2: 87,773,441 (GRCm39) |
N177S |
possibly damaging |
Het |
| Or8k30 |
C |
T |
2: 86,339,025 (GRCm39) |
S74L |
probably damaging |
Het |
| Parp14 |
T |
C |
16: 35,678,124 (GRCm39) |
K615E |
probably benign |
Het |
| Pramel6 |
A |
C |
2: 87,340,814 (GRCm39) |
Q382P |
probably damaging |
Het |
| Prdx2 |
A |
G |
8: 85,698,244 (GRCm39) |
D145G |
probably damaging |
Het |
| Prune1 |
A |
G |
3: 95,172,837 (GRCm39) |
V76A |
probably benign |
Het |
| Sppl2b |
A |
T |
10: 80,699,025 (GRCm39) |
H198L |
probably benign |
Het |
| Ttll9 |
C |
A |
2: 152,836,068 (GRCm39) |
H271N |
probably benign |
Het |
| Vmn2r59 |
C |
A |
7: 41,661,247 (GRCm39) |
R856M |
probably benign |
Het |
| Yeats2 |
C |
T |
16: 20,041,575 (GRCm39) |
T1155I |
probably damaging |
Het |
| Zbbx |
A |
G |
3: 74,989,034 (GRCm39) |
|
probably null |
Het |
| Zfp160 |
A |
G |
17: 21,245,804 (GRCm39) |
D118G |
probably benign |
Het |
| Zfp366 |
A |
G |
13: 99,380,551 (GRCm39) |
M549V |
possibly damaging |
Het |
| Zp3r |
A |
G |
1: 130,526,610 (GRCm39) |
S198P |
probably damaging |
Het |
|
| Other mutations in Cc2d2b |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
mortal
|
UTSW |
19 |
40,797,898 (GRCm39) |
missense |
probably benign |
0.06 |
|
Shuffeloff
|
UTSW |
19 |
40,813,483 (GRCm39) |
missense |
probably damaging |
0.99 |
|
1mM(1):Cc2d2b
|
UTSW |
19 |
40,784,129 (GRCm39) |
missense |
possibly damaging |
0.60 |
|
R6163:Cc2d2b
|
UTSW |
19 |
40,744,950 (GRCm39) |
missense |
probably benign |
0.31 |
|
R6481:Cc2d2b
|
UTSW |
19 |
40,790,839 (GRCm39) |
missense |
possibly damaging |
0.95 |
|
R6651:Cc2d2b
|
UTSW |
19 |
40,766,573 (GRCm39) |
missense |
probably damaging |
0.97 |
|
R6747:Cc2d2b
|
UTSW |
19 |
40,784,111 (GRCm39) |
missense |
probably benign |
0.03 |
|
R6799:Cc2d2b
|
UTSW |
19 |
40,779,652 (GRCm39) |
missense |
possibly damaging |
0.69 |
|
R6857:Cc2d2b
|
UTSW |
19 |
40,759,309 (GRCm39) |
missense |
possibly damaging |
0.62 |
|
R6869:Cc2d2b
|
UTSW |
19 |
40,797,898 (GRCm39) |
missense |
probably benign |
0.06 |
|
R6881:Cc2d2b
|
UTSW |
19 |
40,813,483 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R6900:Cc2d2b
|
UTSW |
19 |
40,813,518 (GRCm39) |
missense |
probably null |
0.08 |
|
R6902:Cc2d2b
|
UTSW |
19 |
40,804,733 (GRCm39) |
missense |
possibly damaging |
0.93 |
|
R6960:Cc2d2b
|
UTSW |
19 |
40,773,506 (GRCm39) |
missense |
possibly damaging |
0.85 |
|
R7016:Cc2d2b
|
UTSW |
19 |
40,784,248 (GRCm39) |
missense |
possibly damaging |
0.85 |
|
R7039:Cc2d2b
|
UTSW |
19 |
40,790,845 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7072:Cc2d2b
|
UTSW |
19 |
40,748,803 (GRCm39) |
missense |
unknown |
|
|
R7192:Cc2d2b
|
UTSW |
19 |
40,762,881 (GRCm39) |
missense |
unknown |
|
|
R7226:Cc2d2b
|
UTSW |
19 |
40,779,751 (GRCm39) |
missense |
unknown |
|
|
R7303:Cc2d2b
|
UTSW |
19 |
40,797,438 (GRCm39) |
missense |
unknown |
|
|
R7324:Cc2d2b
|
UTSW |
19 |
40,797,552 (GRCm39) |
missense |
unknown |
|
|
R7503:Cc2d2b
|
UTSW |
19 |
40,783,056 (GRCm39) |
missense |
unknown |
|
|
R7727:Cc2d2b
|
UTSW |
19 |
40,744,974 (GRCm39) |
missense |
probably benign |
0.03 |
|
R7774:Cc2d2b
|
UTSW |
19 |
40,754,161 (GRCm39) |
missense |
unknown |
|
|
R7830:Cc2d2b
|
UTSW |
19 |
40,753,801 (GRCm39) |
missense |
possibly damaging |
0.95 |
|
R7923:Cc2d2b
|
UTSW |
19 |
40,795,293 (GRCm39) |
missense |
possibly damaging |
0.93 |
|
R7937:Cc2d2b
|
UTSW |
19 |
40,765,736 (GRCm39) |
missense |
|
|
|
R8306:Cc2d2b
|
UTSW |
19 |
40,804,228 (GRCm39) |
nonsense |
probably null |
|
|
R8903:Cc2d2b
|
UTSW |
19 |
40,797,726 (GRCm39) |
missense |
unknown |
|
|
R9056:Cc2d2b
|
UTSW |
19 |
40,784,216 (GRCm39) |
missense |
unknown |
|
|
R9142:Cc2d2b
|
UTSW |
19 |
40,753,845 (GRCm39) |
nonsense |
probably null |
|
|
R9256:Cc2d2b
|
UTSW |
19 |
40,797,848 (GRCm39) |
missense |
unknown |
|
|
R9373:Cc2d2b
|
UTSW |
19 |
40,784,167 (GRCm39) |
missense |
unknown |
|
|
R9500:Cc2d2b
|
UTSW |
19 |
40,797,840 (GRCm39) |
missense |
unknown |
|
|
R9503:Cc2d2b
|
UTSW |
19 |
40,804,275 (GRCm39) |
missense |
unknown |
|
|
R9525:Cc2d2b
|
UTSW |
19 |
40,773,430 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R9534:Cc2d2b
|
UTSW |
19 |
40,799,068 (GRCm39) |
nonsense |
probably null |
|
|
R9667:Cc2d2b
|
UTSW |
19 |
40,753,927 (GRCm39) |
missense |
unknown |
|
|
R9752:Cc2d2b
|
UTSW |
19 |
40,781,271 (GRCm39) |
missense |
probably damaging |
0.96 |
|
R9764:Cc2d2b
|
UTSW |
19 |
40,804,299 (GRCm39) |
missense |
unknown |
|
|
R9798:Cc2d2b
|
UTSW |
19 |
40,783,080 (GRCm39) |
missense |
unknown |
|
|
| Predicted Primers |
PCR Primer
(F):5'- TTAGAAGACGAAGGGCTCTACG -3'
(R):5'- AGCTCAGGTATCTTTCGAAGG -3'
Sequencing Primer
(F):5'- GGGCTCTACGTTCAGAAAAAGCC -3'
(R):5'- GCAGATAGCCGTTGCTTA -3'
|
| Posted On |
2020-09-02 |
Incidental Mutation