Incidental Mutation 'R8377:Vldlr'
ID |
646785 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Vldlr
|
Ensembl Gene |
ENSMUSG00000024924 |
Gene Name |
very low density lipoprotein receptor |
Synonyms |
|
MMRRC Submission |
067745-MU
|
Accession Numbers |
|
Essential gene? |
Possibly non essential
(E-score: 0.285)
|
Stock # |
R8377 (G1)
|
Quality Score |
225.009 |
Status
|
Not validated
|
Chromosome |
19 |
Chromosomal Location |
27193884-27231631 bp(+) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
T to A
at 27212258 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Cysteine to Serine
at position 91
(C91S)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000127329
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000025866]
[ENSMUST00000047645]
[ENSMUST00000164746]
[ENSMUST00000165761]
[ENSMUST00000167487]
[ENSMUST00000172302]
|
AlphaFold |
P98156 |
Predicted Effect |
probably damaging
Transcript: ENSMUST00000025866
AA Change: C91S
PolyPhen 2
Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
|
SMART Domains |
Protein: ENSMUSP00000025866 Gene: ENSMUSG00000024924 AA Change: C91S
Domain | Start | End | E-Value | Type |
signal peptide
|
1 |
23 |
N/A |
INTRINSIC |
EGF_like
|
32 |
68 |
7.38e1 |
SMART |
LDLa
|
32 |
69 |
1.69e-16 |
SMART |
LDLa
|
71 |
110 |
5.81e-15 |
SMART |
LDLa
|
112 |
151 |
1.96e-12 |
SMART |
LDLa
|
153 |
190 |
7.15e-15 |
SMART |
LDLa
|
192 |
231 |
1.23e-13 |
SMART |
LDLa
|
238 |
275 |
1.1e-15 |
SMART |
LDLa
|
277 |
314 |
1.13e-12 |
SMART |
LDLa
|
317 |
357 |
3.86e-11 |
SMART |
EGF_CA
|
356 |
395 |
1e-5 |
SMART |
EGF_CA
|
396 |
435 |
6.1e-10 |
SMART |
Blast:LY
|
461 |
495 |
4e-15 |
BLAST |
|
Predicted Effect |
probably damaging
Transcript: ENSMUST00000047645
AA Change: C91S
PolyPhen 2
Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
|
SMART Domains |
Protein: ENSMUSP00000049145 Gene: ENSMUSG00000024924 AA Change: C91S
Domain | Start | End | E-Value | Type |
signal peptide
|
1 |
23 |
N/A |
INTRINSIC |
EGF_like
|
32 |
68 |
7.38e1 |
SMART |
LDLa
|
32 |
69 |
1.69e-16 |
SMART |
LDLa
|
71 |
110 |
1.25e-14 |
SMART |
LDLa
|
112 |
149 |
7.15e-15 |
SMART |
LDLa
|
151 |
190 |
1.23e-13 |
SMART |
LDLa
|
197 |
234 |
1.1e-15 |
SMART |
LDLa
|
236 |
273 |
1.13e-12 |
SMART |
LDLa
|
276 |
316 |
3.86e-11 |
SMART |
EGF_CA
|
315 |
354 |
1e-5 |
SMART |
EGF_CA
|
355 |
394 |
6.1e-10 |
SMART |
LY
|
420 |
462 |
2.16e-1 |
SMART |
LY
|
464 |
506 |
9.54e-12 |
SMART |
LY
|
507 |
550 |
2.22e-12 |
SMART |
LY
|
551 |
593 |
1.66e-11 |
SMART |
LY
|
594 |
637 |
5.97e-4 |
SMART |
EGF
|
664 |
709 |
2.16e-1 |
SMART |
transmembrane domain
|
728 |
750 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000164746
|
SMART Domains |
Protein: ENSMUSP00000128193 Gene: ENSMUSG00000024924
Domain | Start | End | E-Value | Type |
signal peptide
|
1 |
23 |
N/A |
INTRINSIC |
LDLa
|
32 |
69 |
1.69e-16 |
SMART |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000165761
|
SMART Domains |
Protein: ENSMUSP00000130382 Gene: ENSMUSG00000024924
Domain | Start | End | E-Value | Type |
LDLa
|
1 |
26 |
1.58e0 |
SMART |
EGF
|
28 |
64 |
4e-5 |
SMART |
LY
|
88 |
130 |
2.16e-1 |
SMART |
LY
|
132 |
174 |
9.54e-12 |
SMART |
LY
|
175 |
218 |
2.22e-12 |
SMART |
LY
|
219 |
258 |
3.25e-5 |
SMART |
|
Predicted Effect |
probably damaging
Transcript: ENSMUST00000167487
AA Change: C91S
PolyPhen 2
Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
|
SMART Domains |
Protein: ENSMUSP00000127329 Gene: ENSMUSG00000024924 AA Change: C91S
Domain | Start | End | E-Value | Type |
signal peptide
|
1 |
23 |
N/A |
INTRINSIC |
EGF_like
|
32 |
68 |
7.38e1 |
SMART |
LDLa
|
32 |
69 |
1.69e-16 |
SMART |
LDLa
|
71 |
110 |
5.81e-15 |
SMART |
LDLa
|
112 |
151 |
1.96e-12 |
SMART |
LDLa
|
153 |
190 |
7.15e-15 |
SMART |
LDLa
|
192 |
231 |
1.23e-13 |
SMART |
LDLa
|
238 |
275 |
1.1e-15 |
SMART |
LDLa
|
277 |
314 |
1.13e-12 |
SMART |
LDLa
|
317 |
357 |
3.86e-11 |
SMART |
EGF_CA
|
356 |
395 |
1e-5 |
SMART |
EGF_CA
|
396 |
435 |
6.1e-10 |
SMART |
LY
|
461 |
503 |
2.16e-1 |
SMART |
LY
|
505 |
547 |
9.54e-12 |
SMART |
LY
|
548 |
591 |
2.22e-12 |
SMART |
LY
|
592 |
634 |
1.66e-11 |
SMART |
LY
|
635 |
678 |
5.97e-4 |
SMART |
EGF
|
705 |
750 |
2.16e-1 |
SMART |
transmembrane domain
|
797 |
819 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably damaging
Transcript: ENSMUST00000172302
AA Change: C91S
PolyPhen 2
Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
|
SMART Domains |
Protein: ENSMUSP00000126730 Gene: ENSMUSG00000024924 AA Change: C91S
Domain | Start | End | E-Value | Type |
signal peptide
|
1 |
23 |
N/A |
INTRINSIC |
EGF_like
|
32 |
68 |
7.38e1 |
SMART |
LDLa
|
32 |
69 |
1.69e-16 |
SMART |
LDLa
|
71 |
110 |
5.81e-15 |
SMART |
LDLa
|
112 |
151 |
1.96e-12 |
SMART |
LDLa
|
153 |
190 |
7.15e-15 |
SMART |
LDLa
|
192 |
231 |
1.23e-13 |
SMART |
LDLa
|
238 |
275 |
1.1e-15 |
SMART |
LDLa
|
277 |
314 |
1.13e-12 |
SMART |
LDLa
|
317 |
357 |
3.86e-11 |
SMART |
EGF_CA
|
356 |
395 |
1e-5 |
SMART |
EGF_CA
|
396 |
435 |
6.1e-10 |
SMART |
LY
|
461 |
503 |
2.16e-1 |
SMART |
LY
|
505 |
547 |
9.54e-12 |
SMART |
LY
|
548 |
591 |
2.22e-12 |
SMART |
LY
|
592 |
634 |
1.66e-11 |
SMART |
LY
|
635 |
678 |
5.97e-4 |
SMART |
EGF
|
705 |
750 |
2.16e-1 |
SMART |
transmembrane domain
|
769 |
791 |
N/A |
INTRINSIC |
|
Coding Region Coverage |
- 1x: 100.0%
- 3x: 100.0%
- 10x: 99.7%
- 20x: 99.1%
|
Validation Efficiency |
|
MGI Phenotype |
FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] The low density lipoprotein receptor (LDLR) gene family consists of cell surface proteins involved in receptor-mediated endocytosis of specific ligands. This gene encodes a lipoprotein receptor that is a member of the LDLR family and plays important roles in VLDL-triglyceride metabolism and the reelin signaling pathway. Mutations in this gene cause VLDLR-associated cerebellar hypoplasia. Alternative splicing generates multiple transcript variants encoding distinct isoforms for this gene. [provided by RefSeq, Aug 2009] PHENOTYPE: Homozygous null mutants exhibit modest reductions in body weight and adiposity. In behavioral tests, mutants display deficits in contextual fear conditioning and long term potentiation. [provided by MGI curators]
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 72 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
Acot3 |
C |
A |
12: 84,105,561 (GRCm39) |
C251* |
probably null |
Het |
Acsbg1 |
A |
G |
9: 54,529,789 (GRCm39) |
C273R |
probably damaging |
Het |
Adh6a |
A |
G |
3: 138,031,884 (GRCm39) |
T259A |
probably damaging |
Het |
Aknad1 |
A |
G |
3: 108,689,255 (GRCm39) |
H639R |
possibly damaging |
Het |
Alkal2 |
G |
T |
12: 30,934,850 (GRCm39) |
G23V |
probably damaging |
Het |
Ampd3 |
A |
G |
7: 110,399,937 (GRCm39) |
R342G |
probably damaging |
Het |
Arid5b |
G |
T |
10: 67,933,217 (GRCm39) |
A895E |
probably damaging |
Het |
BB014433 |
GCACACAGCTTTGGAGGTGTACACACCCGGGTTGGGGCCTCTACACACAGCTTTGGAGGTGTACACACCCGGGTTGGGGCCTCTGCACACAGCTTTGG |
GCACACAGCTTTGGAGGTGTACACACCCGGGTTGGGGCCTCTGCACACAGCTTTGG |
8: 15,092,160 (GRCm39) |
|
probably benign |
Het |
Bmp8a |
G |
T |
4: 123,236,482 (GRCm39) |
P7Q |
unknown |
Het |
Boll |
A |
C |
1: 55,362,837 (GRCm39) |
V187G |
possibly damaging |
Het |
Ccdc162 |
A |
T |
10: 41,457,306 (GRCm39) |
C1544S |
probably benign |
Het |
Cmss1 |
A |
C |
16: 57,127,757 (GRCm39) |
M182R |
possibly damaging |
Het |
Cntn3 |
T |
C |
6: 102,186,254 (GRCm39) |
M578V |
probably benign |
Het |
Dmxl2 |
A |
T |
9: 54,286,032 (GRCm39) |
W2718R |
probably damaging |
Het |
Dsg1a |
T |
A |
18: 20,466,831 (GRCm39) |
I567N |
probably damaging |
Het |
Epc2 |
T |
A |
2: 49,412,527 (GRCm39) |
D168E |
probably damaging |
Het |
Ern2 |
G |
A |
7: 121,780,515 (GRCm39) |
Q162* |
probably null |
Het |
F11r |
G |
T |
1: 171,265,111 (GRCm39) |
|
probably benign |
Het |
Fcgrt |
T |
C |
7: 44,751,987 (GRCm39) |
Y59C |
probably damaging |
Het |
Fmn2 |
G |
T |
1: 174,436,011 (GRCm39) |
E661* |
probably null |
Het |
Gbp4 |
T |
A |
5: 105,266,328 (GRCm39) |
Q571L |
probably benign |
Het |
Gm29106 |
A |
T |
1: 118,126,593 (GRCm39) |
H95L |
probably damaging |
Het |
Gphn |
G |
A |
12: 78,711,280 (GRCm39) |
V621M |
probably damaging |
Het |
Grwd1 |
T |
C |
7: 45,480,036 (GRCm39) |
Y57C |
probably damaging |
Het |
Insyn2b |
C |
A |
11: 34,351,964 (GRCm39) |
A2D |
probably damaging |
Het |
Irs2 |
G |
A |
8: 11,054,848 (GRCm39) |
Q1195* |
probably null |
Het |
Itpr1 |
G |
C |
6: 108,487,699 (GRCm39) |
C2375S |
probably benign |
Het |
Kcnmb4 |
A |
T |
10: 116,282,290 (GRCm39) |
Y136N |
probably benign |
Het |
Matn2 |
C |
T |
15: 34,345,511 (GRCm39) |
P173S |
probably damaging |
Het |
Med17 |
A |
C |
9: 15,173,655 (GRCm39) |
D606E |
probably damaging |
Het |
Mpl |
A |
G |
4: 118,301,254 (GRCm39) |
V537A |
|
Het |
Mrpl1 |
C |
G |
5: 96,374,226 (GRCm39) |
A167G |
probably benign |
Het |
Mrpl21 |
T |
C |
19: 3,342,487 (GRCm39) |
F206S |
unknown |
Het |
Msh6 |
T |
A |
17: 88,292,598 (GRCm39) |
M451K |
probably damaging |
Het |
Myo10 |
T |
C |
15: 25,804,481 (GRCm39) |
I1592T |
possibly damaging |
Het |
Naip1 |
A |
T |
13: 100,562,374 (GRCm39) |
D930E |
possibly damaging |
Het |
Necap2 |
T |
C |
4: 140,795,534 (GRCm39) |
I242V |
probably benign |
Het |
Nfya |
A |
G |
17: 48,699,073 (GRCm39) |
V240A |
possibly damaging |
Het |
Olfml2b |
A |
G |
1: 170,496,353 (GRCm39) |
D328G |
probably damaging |
Het |
Or10ak13 |
A |
T |
4: 118,639,203 (GRCm39) |
M193K |
probably benign |
Het |
Or4k35 |
T |
A |
2: 111,099,983 (GRCm39) |
H243L |
probably damaging |
Het |
Or5b24 |
T |
G |
19: 12,912,399 (GRCm39) |
V99G |
probably benign |
Het |
Or5p53 |
T |
G |
7: 107,532,892 (GRCm39) |
L55R |
probably damaging |
Het |
Phf8-ps |
C |
A |
17: 33,286,038 (GRCm39) |
A255S |
probably benign |
Het |
Pkd1l3 |
T |
C |
8: 110,361,982 (GRCm39) |
V1018A |
probably benign |
Het |
Plcg1 |
T |
C |
2: 160,596,842 (GRCm39) |
L761P |
probably damaging |
Het |
Ppp1r36 |
T |
C |
12: 76,485,215 (GRCm39) |
S313P |
possibly damaging |
Het |
Ptpru |
C |
A |
4: 131,535,646 (GRCm39) |
G444C |
probably damaging |
Het |
Rfxank |
A |
T |
8: 70,587,960 (GRCm39) |
V149D |
probably damaging |
Het |
Rimbp2 |
G |
A |
5: 128,857,395 (GRCm39) |
H819Y |
probably damaging |
Het |
Sgms1 |
T |
C |
19: 32,101,821 (GRCm39) |
Y395C |
probably damaging |
Het |
Siae |
G |
A |
9: 37,542,901 (GRCm39) |
|
probably null |
Het |
Slc46a2 |
T |
A |
4: 59,914,713 (GRCm39) |
D70V |
probably damaging |
Het |
Smpdl3a |
A |
C |
10: 57,677,032 (GRCm39) |
L43F |
possibly damaging |
Het |
Spcs1 |
T |
A |
14: 30,722,103 (GRCm39) |
D146V |
possibly damaging |
Het |
Srcin1 |
T |
C |
11: 97,442,804 (GRCm39) |
D8G |
probably damaging |
Het |
Stra6 |
G |
T |
9: 58,056,488 (GRCm39) |
L373F |
probably damaging |
Het |
Tacc1 |
A |
T |
8: 25,672,299 (GRCm39) |
S310T |
possibly damaging |
Het |
Tlr12 |
T |
C |
4: 128,509,566 (GRCm39) |
S895G |
probably benign |
Het |
Tnfaip3 |
A |
G |
10: 18,887,258 (GRCm39) |
V89A |
probably damaging |
Het |
Top1 |
C |
T |
2: 160,488,009 (GRCm39) |
|
probably benign |
Het |
Trappc13 |
T |
G |
13: 104,297,509 (GRCm39) |
I132L |
probably benign |
Het |
Trpt1 |
C |
T |
19: 6,976,349 (GRCm39) |
Q249* |
probably null |
Het |
Tsnaxip1 |
A |
C |
8: 106,569,179 (GRCm39) |
K510Q |
probably damaging |
Het |
Usp39 |
A |
T |
6: 72,305,657 (GRCm39) |
N375K |
probably benign |
Het |
Vmn1r232 |
T |
A |
17: 21,134,239 (GRCm39) |
L120F |
probably benign |
Het |
Vmn2r71 |
T |
C |
7: 85,264,707 (GRCm39) |
V13A |
probably benign |
Het |
Wdr11 |
T |
A |
7: 129,208,412 (GRCm39) |
V389E |
possibly damaging |
Het |
Wsb2 |
A |
T |
5: 117,514,766 (GRCm39) |
I321F |
possibly damaging |
Het |
Zan |
A |
T |
5: 137,389,949 (GRCm39) |
V4841E |
unknown |
Het |
Zfy1 |
A |
T |
Y: 725,723 (GRCm39) |
F681I |
possibly damaging |
Het |
Zpld1 |
C |
A |
16: 55,067,017 (GRCm39) |
E179D |
probably benign |
Het |
|
Other mutations in Vldlr |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL01346:Vldlr
|
APN |
19 |
27,217,081 (GRCm39) |
missense |
possibly damaging |
0.93 |
IGL01575:Vldlr
|
APN |
19 |
27,224,031 (GRCm39) |
missense |
probably benign |
|
IGL01626:Vldlr
|
APN |
19 |
27,221,173 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02213:Vldlr
|
APN |
19 |
27,218,726 (GRCm39) |
missense |
probably benign |
0.09 |
IGL02365:Vldlr
|
APN |
19 |
27,223,025 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02488:Vldlr
|
APN |
19 |
27,215,675 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02708:Vldlr
|
APN |
19 |
27,215,485 (GRCm39) |
missense |
possibly damaging |
0.92 |
IGL02947:Vldlr
|
APN |
19 |
27,217,120 (GRCm39) |
missense |
probably benign |
0.03 |
disturbed
|
UTSW |
19 |
27,216,204 (GRCm39) |
nonsense |
probably null |
|
r26
|
UTSW |
19 |
27,223,054 (GRCm39) |
missense |
probably damaging |
0.99 |
spotty
|
UTSW |
19 |
27,216,192 (GRCm39) |
missense |
probably damaging |
1.00 |
PIT4142001:Vldlr
|
UTSW |
19 |
27,212,269 (GRCm39) |
missense |
probably benign |
0.05 |
R0195:Vldlr
|
UTSW |
19 |
27,215,786 (GRCm39) |
missense |
probably damaging |
1.00 |
R0288:Vldlr
|
UTSW |
19 |
27,218,051 (GRCm39) |
splice site |
probably benign |
|
R0536:Vldlr
|
UTSW |
19 |
27,217,364 (GRCm39) |
missense |
probably damaging |
1.00 |
R0537:Vldlr
|
UTSW |
19 |
27,225,318 (GRCm39) |
missense |
probably damaging |
1.00 |
R0542:Vldlr
|
UTSW |
19 |
27,213,655 (GRCm39) |
missense |
probably benign |
0.01 |
R0594:Vldlr
|
UTSW |
19 |
27,212,219 (GRCm39) |
missense |
probably damaging |
1.00 |
R0624:Vldlr
|
UTSW |
19 |
27,215,663 (GRCm39) |
missense |
possibly damaging |
0.91 |
R0726:Vldlr
|
UTSW |
19 |
27,215,786 (GRCm39) |
missense |
probably damaging |
1.00 |
R1017:Vldlr
|
UTSW |
19 |
27,218,733 (GRCm39) |
missense |
probably damaging |
1.00 |
R1148:Vldlr
|
UTSW |
19 |
27,218,691 (GRCm39) |
missense |
probably benign |
0.01 |
R1148:Vldlr
|
UTSW |
19 |
27,218,691 (GRCm39) |
missense |
probably benign |
0.01 |
R1443:Vldlr
|
UTSW |
19 |
27,217,121 (GRCm39) |
missense |
possibly damaging |
0.91 |
R1493:Vldlr
|
UTSW |
19 |
27,218,691 (GRCm39) |
missense |
probably benign |
0.01 |
R1520:Vldlr
|
UTSW |
19 |
27,224,466 (GRCm39) |
missense |
possibly damaging |
0.96 |
R1520:Vldlr
|
UTSW |
19 |
27,217,943 (GRCm39) |
missense |
probably damaging |
0.99 |
R1657:Vldlr
|
UTSW |
19 |
27,223,070 (GRCm39) |
missense |
probably benign |
0.00 |
R1901:Vldlr
|
UTSW |
19 |
27,218,709 (GRCm39) |
missense |
probably damaging |
1.00 |
R2047:Vldlr
|
UTSW |
19 |
27,212,238 (GRCm39) |
missense |
probably damaging |
1.00 |
R2258:Vldlr
|
UTSW |
19 |
27,215,786 (GRCm39) |
missense |
probably damaging |
1.00 |
R2273:Vldlr
|
UTSW |
19 |
27,225,415 (GRCm39) |
missense |
probably damaging |
1.00 |
R2423:Vldlr
|
UTSW |
19 |
27,213,688 (GRCm39) |
missense |
possibly damaging |
0.49 |
R3196:Vldlr
|
UTSW |
19 |
27,220,554 (GRCm39) |
missense |
probably damaging |
0.98 |
R3752:Vldlr
|
UTSW |
19 |
27,215,731 (GRCm39) |
missense |
probably damaging |
1.00 |
R3801:Vldlr
|
UTSW |
19 |
27,195,021 (GRCm39) |
missense |
probably damaging |
0.99 |
R3835:Vldlr
|
UTSW |
19 |
27,212,214 (GRCm39) |
missense |
probably damaging |
1.00 |
R4027:Vldlr
|
UTSW |
19 |
27,215,713 (GRCm39) |
missense |
probably benign |
|
R4301:Vldlr
|
UTSW |
19 |
27,215,802 (GRCm39) |
missense |
possibly damaging |
0.80 |
R4470:Vldlr
|
UTSW |
19 |
27,212,219 (GRCm39) |
missense |
probably damaging |
0.96 |
R4541:Vldlr
|
UTSW |
19 |
27,216,192 (GRCm39) |
missense |
probably damaging |
1.00 |
R4765:Vldlr
|
UTSW |
19 |
27,217,947 (GRCm39) |
missense |
probably damaging |
1.00 |
R4771:Vldlr
|
UTSW |
19 |
27,217,290 (GRCm39) |
missense |
probably damaging |
0.97 |
R4795:Vldlr
|
UTSW |
19 |
27,216,252 (GRCm39) |
splice site |
probably null |
|
R4839:Vldlr
|
UTSW |
19 |
27,215,465 (GRCm39) |
missense |
probably damaging |
1.00 |
R5074:Vldlr
|
UTSW |
19 |
27,215,677 (GRCm39) |
missense |
probably damaging |
1.00 |
R5134:Vldlr
|
UTSW |
19 |
27,216,212 (GRCm39) |
nonsense |
probably null |
|
R5281:Vldlr
|
UTSW |
19 |
27,221,631 (GRCm39) |
missense |
probably benign |
0.44 |
R5466:Vldlr
|
UTSW |
19 |
27,217,243 (GRCm39) |
critical splice acceptor site |
probably null |
|
R5514:Vldlr
|
UTSW |
19 |
27,221,624 (GRCm39) |
missense |
probably damaging |
0.97 |
R5886:Vldlr
|
UTSW |
19 |
27,221,171 (GRCm39) |
missense |
probably benign |
0.03 |
R5889:Vldlr
|
UTSW |
19 |
27,217,064 (GRCm39) |
missense |
probably damaging |
1.00 |
R6110:Vldlr
|
UTSW |
19 |
27,215,477 (GRCm39) |
missense |
possibly damaging |
0.92 |
R6343:Vldlr
|
UTSW |
19 |
27,223,049 (GRCm39) |
missense |
probably damaging |
0.99 |
R6833:Vldlr
|
UTSW |
19 |
27,217,974 (GRCm39) |
missense |
probably damaging |
1.00 |
R6838:Vldlr
|
UTSW |
19 |
27,225,370 (GRCm39) |
missense |
probably damaging |
1.00 |
R7169:Vldlr
|
UTSW |
19 |
27,221,728 (GRCm39) |
missense |
probably benign |
|
R7197:Vldlr
|
UTSW |
19 |
27,212,241 (GRCm39) |
missense |
probably benign |
0.36 |
R7304:Vldlr
|
UTSW |
19 |
27,216,004 (GRCm39) |
missense |
possibly damaging |
0.93 |
R7403:Vldlr
|
UTSW |
19 |
27,213,674 (GRCm39) |
nonsense |
probably null |
|
R7658:Vldlr
|
UTSW |
19 |
27,220,536 (GRCm39) |
missense |
probably benign |
0.33 |
R7754:Vldlr
|
UTSW |
19 |
27,195,015 (GRCm39) |
start codon destroyed |
probably benign |
0.01 |
R8105:Vldlr
|
UTSW |
19 |
27,216,204 (GRCm39) |
nonsense |
probably null |
|
R8529:Vldlr
|
UTSW |
19 |
27,207,656 (GRCm39) |
missense |
probably benign |
0.03 |
R8777:Vldlr
|
UTSW |
19 |
27,217,946 (GRCm39) |
missense |
probably benign |
0.00 |
R8777-TAIL:Vldlr
|
UTSW |
19 |
27,217,946 (GRCm39) |
missense |
probably benign |
0.00 |
R9380:Vldlr
|
UTSW |
19 |
27,216,192 (GRCm39) |
missense |
possibly damaging |
0.63 |
R9400:Vldlr
|
UTSW |
19 |
27,216,175 (GRCm39) |
missense |
probably damaging |
0.99 |
R9483:Vldlr
|
UTSW |
19 |
27,224,031 (GRCm39) |
missense |
probably benign |
0.00 |
R9502:Vldlr
|
UTSW |
19 |
27,218,742 (GRCm39) |
missense |
probably damaging |
1.00 |
R9509:Vldlr
|
UTSW |
19 |
27,221,687 (GRCm39) |
missense |
probably benign |
0.44 |
R9630:Vldlr
|
UTSW |
19 |
27,207,623 (GRCm39) |
missense |
probably damaging |
1.00 |
R9767:Vldlr
|
UTSW |
19 |
27,212,274 (GRCm39) |
missense |
probably damaging |
1.00 |
R9768:Vldlr
|
UTSW |
19 |
27,218,720 (GRCm39) |
missense |
possibly damaging |
0.47 |
|
Predicted Primers |
PCR Primer
(F):5'- TAGAGCTCAGCCCTAGAGATGC -3'
(R):5'- TCAAGTTTCAGGCAGGCAAAG -3'
Sequencing Primer
(F):5'- GCCCTAGAGATGCCAACAATTTG -3'
(R):5'- TTTCAGGCAGGCAAAGAAAAATG -3'
|
Posted On |
2020-09-02 |