Mutagenetix > Incidental Mutation

Incidental Mutation 'R8400:Vmn2r22'

647807

Institutional Source

Beutler Lab

Gene Symbol

Vmn2r22

Ensembl Gene

ENSMUSG00000095486

Gene Name

vomeronasal 2, receptor 22

Synonyms

EG546913

MMRRC Submission

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.069) question?

Stock #

R8400 (G1)

Quality Score

225.009

Status

Not validated

Chromosome

Chromosomal Location

123609758-123650635 bp(-) (GRCm38)

Type of Mutation

nonsense

DNA Base Change (assembly)

A to T at 123637527 bp (GRCm38)

Zygosity

Heterozygous

Amino Acid Change

Leucine to Stop codon at position 368 (L368*)

Ref Sequence

ENSEMBL: ENSMUSP00000132043 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000170808]

AlphaFold

E9Q7S8

Predicted Effect

probably null
Transcript: ENSMUST00000170808
AA Change: L368*

SMART Domains

Protein: ENSMUSP00000132043
Gene: ENSMUSG00000095486
AA Change: L368*

Domain	Start	End	E-Value	Type
signal peptide	1	17	N/A	INTRINSIC
Pfam:ANF_receptor	81	473	1.4e-32	PFAM
Pfam:NCD3G	517	570	2.2e-23	PFAM
Pfam:7tm_3	601	838	1.2e-54	PFAM

Coding Region Coverage

1x: 100.0%
3x: 99.9%
10x: 99.7%
20x: 99.0%

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 47 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Abca13	G	A	11: 9,293,925	M1929I	probably benign	Het
Abca13	T	C	11: 9,298,218	I2655T	probably damaging	Het
Acad10	A	G	5: 121,626,205	V887A	possibly damaging	Het
Acot10	T	C	15: 20,666,172	E161G	possibly damaging	Het
Astn1	C	T	1: 158,657,100	P919L	probably benign	Het
Atp1a4	T	A	1: 172,234,494	D688V	probably damaging	Het
C4bp	C	A	1: 130,636,747	C400F	probably damaging	Het
Col6a6	A	C	9: 105,774,796	D1005E	probably damaging	Het
Csnk1g3	C	T	18: 53,953,288	R422C	probably benign	Het
Cutc	T	C	19: 43,753,205	S15P	probably benign	Het
Dgkb	T	C	12: 38,602,838		probably null	Het
Disc1	T	C	8: 125,232,993	V748A	probably benign	Het
Dmbt1	C	G	7: 131,082,587	D778E	unknown	Het
Dmxl2	T	C	9: 54,383,753	Y2471C	probably benign	Het
Fam185a	T	A	5: 21,438,816	N243K	probably benign	Het
Fchsd2	A	T	7: 101,253,573	Q386L	possibly damaging	Het
Gm904	C	A	13: 50,643,417	P49Q	probably damaging	Het
H2-Q10	C	T	17: 35,470,477	R59C	probably damaging	Het
Ier5l	A	G	2: 30,473,093	Y307H	possibly damaging	Het
Kmt2e	C	A	5: 23,497,092	T906K	probably benign	Het
Kndc1	C	T	7: 139,913,518	R467W	probably damaging	Het
Muc5ac	C	A	7: 141,810,476	T2508K	probably damaging	Het
Nlrp9a	A	T	7: 26,565,006	M784L	probably benign	Het
Nlrp9b	T	A	7: 20,024,012	C391*	probably null	Het
Nubp2	A	C	17: 24,884,465	M146R	probably damaging	Het
Olfr1295	A	T	2: 111,565,402	L14H	probably damaging	Het
Olfr1359	G	A	13: 21,703,915	V305M	probably benign	Het
Olfr1419	T	A	19: 11,871,214	M1L	probably damaging	Het
Olfr43	C	T	11: 74,206,395	V274M	possibly damaging	Het
Olfr694	T	A	7: 106,689,669	S21C	probably benign	Het
Olfr857	A	T	9: 19,713,093	N89Y	probably benign	Het
Otud1	T	C	2: 19,658,378	V106A	possibly damaging	Het
Pcdhac1	T	A	18: 37,092,400	Y755*	probably null	Het
Pkd1l3	C	T	8: 109,623,888	P455L	possibly damaging	Het
Ptprb	GAGACCCTCGGGAGCACTGCAGAGACCCTCAGGAACACTGCAAAGACCCTCGGGAGCACTGCAGAGACCCTCAGGAACACTGCAAAGACCCTCGGGAGCACTGCAGAGACCCTCGGGAGCACTGCAAAGACCCTCGGGAGCACTGCAAAGACCCTCGGGAGCACTGCAAAGACCCTCGGGAGCACT	GAGACCCTCGGGAGCACTGCAGAGACCCTCAGGAACACTGCAAAGACCCTCGGGAGCACTGCAGAGACCCTCGGGAGCACTGCAAAGACCCTCGGGAGCACTGCAAAGACCCTCGGGAGCACTGCAAAGACCCTCGGGAGCACT	10: 116,283,572		probably benign	Het
Samhd1	T	C	2: 157,099,433	E648G	probably benign	Het
Smarca5	T	C	8: 80,709,127	T794A	probably benign	Het
Spc24	A	T	9: 21,757,730	L87H	probably damaging	Het
Sppl2b	TGTCACAGGT	TGT	10: 80,866,069		probably null	Het
Stra6l	G	A	4: 45,864,905	R77Q	probably damaging	Het
Tdrd1	G	A	19: 56,848,649	V472M	probably benign	Het
Tsc2	A	T	17: 24,604,987	I948K	possibly damaging	Het
Ttc39d	T	C	17: 80,216,005	V31A	probably benign	Het
Vmn1r158	A	T	7: 22,789,880	C301*	probably null	Het
Vmn2r79	A	G	7: 87,002,100	T236A	probably benign	Het
Vwa1	T	C	4: 155,772,768	H191R	probably benign	Het
Zdbf2	T	A	1: 63,304,976	V838E	possibly damaging	Het

Other mutations in Vmn2r22

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01024:Vmn2r22	APN	6	123638053	missense	probably damaging	1.00
IGL01764:Vmn2r22	APN	6	123650420	critical splice donor site	probably null
IGL02037:Vmn2r22	APN	6	123649067	missense	probably damaging	1.00
IGL02183:Vmn2r22	APN	6	123638004	missense	probably damaging	1.00
IGL02335:Vmn2r22	APN	6	123638092	missense	probably damaging	0.99
IGL02440:Vmn2r22	APN	6	123637405	missense	probably benign	0.00
IGL02663:Vmn2r22	APN	6	123649158	missense	probably benign	0.11
IGL03101:Vmn2r22	APN	6	123637336	missense	probably benign	0.09
R0266:Vmn2r22	UTSW	6	123637404	missense	probably damaging	0.99
R0348:Vmn2r22	UTSW	6	123637725	missense	probably damaging	1.00
R0780:Vmn2r22	UTSW	6	123637974	missense	probably damaging	1.00
R0849:Vmn2r22	UTSW	6	123637404	missense	probably damaging	0.99
R1074:Vmn2r22	UTSW	6	123649258	missense	probably benign	0.02
R1456:Vmn2r22	UTSW	6	123637665	missense	possibly damaging	0.86
R1719:Vmn2r22	UTSW	6	123637843	missense	possibly damaging	0.68
R1989:Vmn2r22	UTSW	6	123637541	missense	probably damaging	1.00
R2928:Vmn2r22	UTSW	6	123637443	missense	probably damaging	0.96
R2939:Vmn2r22	UTSW	6	123637635	missense	probably damaging	0.99
R3727:Vmn2r22	UTSW	6	123650625	missense	possibly damaging	0.70
R3782:Vmn2r22	UTSW	6	123650632	nonsense	probably null
R3873:Vmn2r22	UTSW	6	123637380	missense	possibly damaging	0.68
R4344:Vmn2r22	UTSW	6	123637797	missense	probably damaging	1.00
R4407:Vmn2r22	UTSW	6	123637954	missense	probably damaging	1.00
R4428:Vmn2r22	UTSW	6	123637858	missense	possibly damaging	0.47
R4430:Vmn2r22	UTSW	6	123637858	missense	possibly damaging	0.47
R4431:Vmn2r22	UTSW	6	123637858	missense	possibly damaging	0.47
R4701:Vmn2r22	UTSW	6	123650469	missense	probably benign	0.00
R5274:Vmn2r22	UTSW	6	123650634	start codon destroyed	probably null	0.93
R5668:Vmn2r22	UTSW	6	123637914	missense	probably benign	0.06
R5776:Vmn2r22	UTSW	6	123637714	missense	probably damaging	1.00
R6416:Vmn2r22	UTSW	6	123637738	missense	probably damaging	1.00
R7788:Vmn2r22	UTSW	6	123637600	missense	not run
R8208:Vmn2r22	UTSW	6	123637485	missense	probably damaging	1.00
R8267:Vmn2r22	UTSW	6	123638041	missense	possibly damaging	0.81
R8814:Vmn2r22	UTSW	6	123637830	missense	probably damaging	0.96
R8850:Vmn2r22	UTSW	6	123637495	missense	probably damaging	1.00
R9613:Vmn2r22	UTSW	6	123638116	missense	probably damaging	0.99

Predicted Primers

PCR Primer
(F):5'- GCACTTCTATCCAGTGAGCC -3'
(R):5'- TCTGGATCACAACTTCTGATTGG -3'

Sequencing Primer
(F):5'- CTCCTTCCACTCTGAGGGACAG -3'
(R):5'- GGATCACAACTTCTGATTGGGATATC -3'

Posted On

2020-09-02