Incidental Mutation 'R8400:Vmn2r79'
ID 647811
Institutional Source Beutler Lab
Gene Symbol Vmn2r79
Ensembl Gene ENSMUSG00000090362
Gene Name vomeronasal 2, receptor 79
Synonyms EG621430
MMRRC Submission 067763-MU
Accession Numbers
Essential gene? Probably non essential (E-score: 0.093) question?
Stock # R8400 (G1)
Quality Score 225.009
Status Not validated
Chromosome 7
Chromosomal Location 86996465-87037968 bp(+) (GRCm38)
Type of Mutation missense
DNA Base Change (assembly) A to G at 87002100 bp (GRCm38)
Zygosity Heterozygous
Amino Acid Change Threonine to Alanine at position 236 (T236A)
Ref Sequence ENSEMBL: ENSMUSP00000132478 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000164462]
AlphaFold E9Q067
Predicted Effect probably benign
Transcript: ENSMUST00000164462
AA Change: T236A

PolyPhen 2 Score 0.003 (Sensitivity: 0.98; Specificity: 0.44)
SMART Domains Protein: ENSMUSP00000132478
Gene: ENSMUSG00000090362
AA Change: T236A

DomainStartEndE-ValueType
signal peptide 1 18 N/A INTRINSIC
Pfam:ANF_receptor 75 464 1.9e-31 PFAM
Pfam:NCD3G 506 559 3.1e-21 PFAM
Pfam:7tm_3 592 827 2.8e-53 PFAM
Coding Region Coverage
  • 1x: 100.0%
  • 3x: 99.9%
  • 10x: 99.7%
  • 20x: 99.0%
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 47 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Abca13 T C 11: 9,298,218 (GRCm38) I2655T probably damaging Het
Abca13 G A 11: 9,293,925 (GRCm38) M1929I probably benign Het
Acad10 A G 5: 121,626,205 (GRCm38) V887A possibly damaging Het
Acot10 T C 15: 20,666,172 (GRCm38) E161G possibly damaging Het
Astn1 C T 1: 158,657,100 (GRCm38) P919L probably benign Het
Atp1a4 T A 1: 172,234,494 (GRCm38) D688V probably damaging Het
C4bp C A 1: 130,636,747 (GRCm38) C400F probably damaging Het
Col6a6 A C 9: 105,774,796 (GRCm38) D1005E probably damaging Het
Csnk1g3 C T 18: 53,953,288 (GRCm38) R422C probably benign Het
Cutc T C 19: 43,753,205 (GRCm38) S15P probably benign Het
Dgkb T C 12: 38,602,838 (GRCm38) probably null Het
Disc1 T C 8: 125,232,993 (GRCm38) V748A probably benign Het
Dmbt1 C G 7: 131,082,587 (GRCm38) D778E unknown Het
Dmxl2 T C 9: 54,383,753 (GRCm38) Y2471C probably benign Het
Fam185a T A 5: 21,438,816 (GRCm38) N243K probably benign Het
Fchsd2 A T 7: 101,253,573 (GRCm38) Q386L possibly damaging Het
Gm904 C A 13: 50,643,417 (GRCm38) P49Q probably damaging Het
H2-Q10 C T 17: 35,470,477 (GRCm38) R59C probably damaging Het
Ier5l A G 2: 30,473,093 (GRCm38) Y307H possibly damaging Het
Kmt2e C A 5: 23,497,092 (GRCm38) T906K probably benign Het
Kndc1 C T 7: 139,913,518 (GRCm38) R467W probably damaging Het
Muc5ac C A 7: 141,810,476 (GRCm38) T2508K probably damaging Het
Nlrp9a A T 7: 26,565,006 (GRCm38) M784L probably benign Het
Nlrp9b T A 7: 20,024,012 (GRCm38) C391* probably null Het
Nubp2 A C 17: 24,884,465 (GRCm38) M146R probably damaging Het
Or10q3 T A 19: 11,871,214 (GRCm38) M1L probably damaging Het
Or1a1b C T 11: 74,206,395 (GRCm38) V274M possibly damaging Het
Or2ag1b T A 7: 106,689,669 (GRCm38) S21C probably benign Het
Or2b2 G A 13: 21,703,915 (GRCm38) V305M probably benign Het
Or4k45 A T 2: 111,565,402 (GRCm38) L14H probably damaging Het
Or7e166 A T 9: 19,713,093 (GRCm38) N89Y probably benign Het
Otud1 T C 2: 19,658,378 (GRCm38) V106A possibly damaging Het
Pcdhac1 T A 18: 37,092,400 (GRCm38) Y755* probably null Het
Pkd1l3 C T 8: 109,623,888 (GRCm38) P455L possibly damaging Het
Ptprb GAGACCCTCGGGAGCACTGCAGAGACCCTCAGGAACACTGCAAAGACCCTCGGGAGCACTGCAGAGACCCTCAGGAACACTGCAAAGACCCTCGGGAGCACTGCAGAGACCCTCGGGAGCACTGCAAAGACCCTCGGGAGCACTGCAAAGACCCTCGGGAGCACTGCAAAGACCCTCGGGAGCACT GAGACCCTCGGGAGCACTGCAGAGACCCTCAGGAACACTGCAAAGACCCTCGGGAGCACTGCAGAGACCCTCGGGAGCACTGCAAAGACCCTCGGGAGCACTGCAAAGACCCTCGGGAGCACTGCAAAGACCCTCGGGAGCACT 10: 116,283,572 (GRCm38) probably benign Het
Samhd1 T C 2: 157,099,433 (GRCm38) E648G probably benign Het
Smarca5 T C 8: 80,709,127 (GRCm38) T794A probably benign Het
Spc24 A T 9: 21,757,730 (GRCm38) L87H probably damaging Het
Sppl2b TGTCACAGGT TGT 10: 80,866,069 (GRCm38) probably null Het
Stra6l G A 4: 45,864,905 (GRCm38) R77Q probably damaging Het
Tdrd1 G A 19: 56,848,649 (GRCm38) V472M probably benign Het
Tsc2 A T 17: 24,604,987 (GRCm38) I948K possibly damaging Het
Ttc39d T C 17: 80,216,005 (GRCm38) V31A probably benign Het
Vmn1r158 A T 7: 22,789,880 (GRCm38) C301* probably null Het
Vmn2r22 A T 6: 123,637,527 (GRCm38) L368* probably null Het
Vwa1 T C 4: 155,772,768 (GRCm38) H191R probably benign Het
Zdbf2 T A 1: 63,304,976 (GRCm38) V838E possibly damaging Het
Other mutations in Vmn2r79
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01401:Vmn2r79 APN 7 87,037,273 (GRCm38) missense probably benign 0.01
IGL01675:Vmn2r79 APN 7 86,996,648 (GRCm38) missense probably benign 0.01
IGL01760:Vmn2r79 APN 7 87,002,158 (GRCm38) missense probably benign
IGL01834:Vmn2r79 APN 7 87,037,146 (GRCm38) missense probably benign 0.01
IGL01843:Vmn2r79 APN 7 87,037,277 (GRCm38) missense probably damaging 1.00
IGL01914:Vmn2r79 APN 7 87,037,363 (GRCm38) missense probably benign 0.14
IGL01980:Vmn2r79 APN 7 87,037,082 (GRCm38) missense possibly damaging 0.49
IGL02438:Vmn2r79 APN 7 87,002,536 (GRCm38) missense probably damaging 0.98
IGL02740:Vmn2r79 APN 7 87,004,158 (GRCm38) missense probably benign 0.00
IGL03052:Vmn2r79 UTSW 7 87,003,591 (GRCm38) missense probably benign 0.00
PIT4445001:Vmn2r79 UTSW 7 87,002,200 (GRCm38) missense possibly damaging 0.46
R0096:Vmn2r79 UTSW 7 87,037,319 (GRCm38) missense probably damaging 1.00
R0096:Vmn2r79 UTSW 7 87,037,319 (GRCm38) missense probably damaging 1.00
R0270:Vmn2r79 UTSW 7 87,003,386 (GRCm38) missense probably benign 0.00
R0336:Vmn2r79 UTSW 7 87,002,079 (GRCm38) missense probably benign 0.15
R0418:Vmn2r79 UTSW 7 87,002,403 (GRCm38) missense probably benign 0.18
R1070:Vmn2r79 UTSW 7 87,003,473 (GRCm38) missense probably damaging 1.00
R1234:Vmn2r79 UTSW 7 87,004,099 (GRCm38) missense possibly damaging 0.71
R1459:Vmn2r79 UTSW 7 87,037,794 (GRCm38) missense probably benign 0.01
R1513:Vmn2r79 UTSW 7 87,037,444 (GRCm38) missense probably benign 0.01
R1624:Vmn2r79 UTSW 7 87,004,039 (GRCm38) critical splice acceptor site probably null
R1633:Vmn2r79 UTSW 7 87,037,834 (GRCm38) missense possibly damaging 0.52
R1676:Vmn2r79 UTSW 7 87,002,631 (GRCm38) missense probably benign
R1781:Vmn2r79 UTSW 7 87,002,347 (GRCm38) missense probably benign 0.00
R1794:Vmn2r79 UTSW 7 87,001,413 (GRCm38) missense probably benign 0.37
R1823:Vmn2r79 UTSW 7 87,037,872 (GRCm38) missense probably damaging 1.00
R2013:Vmn2r79 UTSW 7 87,004,081 (GRCm38) missense possibly damaging 0.50
R2018:Vmn2r79 UTSW 7 87,002,426 (GRCm38) missense probably benign 0.07
R2019:Vmn2r79 UTSW 7 87,002,426 (GRCm38) missense probably benign 0.07
R2177:Vmn2r79 UTSW 7 86,996,631 (GRCm38) missense possibly damaging 0.94
R2984:Vmn2r79 UTSW 7 87,001,891 (GRCm38) missense possibly damaging 0.85
R3719:Vmn2r79 UTSW 7 87,002,037 (GRCm38) missense probably benign 0.05
R3798:Vmn2r79 UTSW 7 87,002,194 (GRCm38) missense possibly damaging 0.88
R3969:Vmn2r79 UTSW 7 87,003,593 (GRCm38) missense probably damaging 1.00
R4182:Vmn2r79 UTSW 7 87,001,891 (GRCm38) missense possibly damaging 0.85
R4183:Vmn2r79 UTSW 7 87,001,891 (GRCm38) missense possibly damaging 0.85
R4245:Vmn2r79 UTSW 7 87,002,416 (GRCm38) missense possibly damaging 0.73
R4301:Vmn2r79 UTSW 7 87,001,891 (GRCm38) missense possibly damaging 0.85
R4391:Vmn2r79 UTSW 7 87,001,891 (GRCm38) missense possibly damaging 0.85
R4393:Vmn2r79 UTSW 7 87,001,891 (GRCm38) missense possibly damaging 0.85
R4394:Vmn2r79 UTSW 7 87,001,891 (GRCm38) missense possibly damaging 0.85
R4396:Vmn2r79 UTSW 7 87,001,891 (GRCm38) missense possibly damaging 0.85
R4397:Vmn2r79 UTSW 7 87,001,891 (GRCm38) missense possibly damaging 0.85
R4592:Vmn2r79 UTSW 7 87,004,111 (GRCm38) missense possibly damaging 0.86
R4697:Vmn2r79 UTSW 7 87,037,960 (GRCm38) missense probably damaging 0.98
R4897:Vmn2r79 UTSW 7 87,001,467 (GRCm38) missense probably benign
R5016:Vmn2r79 UTSW 7 87,037,340 (GRCm38) missense probably benign 0.00
R5058:Vmn2r79 UTSW 7 87,002,215 (GRCm38) missense probably damaging 0.98
R5177:Vmn2r79 UTSW 7 87,001,969 (GRCm38) missense probably damaging 0.97
R6078:Vmn2r79 UTSW 7 87,004,111 (GRCm38) missense possibly damaging 0.86
R6079:Vmn2r79 UTSW 7 87,004,111 (GRCm38) missense possibly damaging 0.86
R6138:Vmn2r79 UTSW 7 87,004,111 (GRCm38) missense possibly damaging 0.86
R6257:Vmn2r79 UTSW 7 87,002,570 (GRCm38) missense probably benign 0.27
R6260:Vmn2r79 UTSW 7 87,037,157 (GRCm38) missense probably benign 0.00
R6307:Vmn2r79 UTSW 7 87,037,768 (GRCm38) missense probably damaging 1.00
R6323:Vmn2r79 UTSW 7 87,001,314 (GRCm38) missense probably benign 0.05
R6374:Vmn2r79 UTSW 7 87,002,290 (GRCm38) missense probably benign 0.02
R6530:Vmn2r79 UTSW 7 87,002,044 (GRCm38) missense possibly damaging 0.91
R6546:Vmn2r79 UTSW 7 87,003,533 (GRCm38) missense probably benign 0.01
R6682:Vmn2r79 UTSW 7 87,004,162 (GRCm38) missense possibly damaging 0.69
R6858:Vmn2r79 UTSW 7 87,037,372 (GRCm38) missense probably benign
R6965:Vmn2r79 UTSW 7 87,001,892 (GRCm38) missense probably benign 0.10
R7130:Vmn2r79 UTSW 7 87,002,266 (GRCm38) missense probably damaging 0.99
R7156:Vmn2r79 UTSW 7 87,037,643 (GRCm38) missense probably damaging 0.98
R7604:Vmn2r79 UTSW 7 87,003,384 (GRCm38) critical splice acceptor site probably null
R7691:Vmn2r79 UTSW 7 87,037,903 (GRCm38) missense probably damaging 0.96
R8055:Vmn2r79 UTSW 7 87,037,333 (GRCm38) missense possibly damaging 0.94
R8070:Vmn2r79 UTSW 7 87,002,128 (GRCm38) missense probably benign
R8073:Vmn2r79 UTSW 7 87,002,254 (GRCm38) missense probably benign 0.00
R8145:Vmn2r79 UTSW 7 87,037,654 (GRCm38) missense probably benign 0.02
R8263:Vmn2r79 UTSW 7 87,037,518 (GRCm38) missense possibly damaging 0.89
R8350:Vmn2r79 UTSW 7 87,037,533 (GRCm38) nonsense probably null
R8814:Vmn2r79 UTSW 7 87,002,506 (GRCm38) missense probably benign 0.00
R8862:Vmn2r79 UTSW 7 86,996,504 (GRCm38) missense probably benign 0.23
R9146:Vmn2r79 UTSW 7 87,001,473 (GRCm38) nonsense probably null
R9276:Vmn2r79 UTSW 7 87,037,837 (GRCm38) missense probably damaging 1.00
R9361:Vmn2r79 UTSW 7 87,003,614 (GRCm38) critical splice donor site probably null
R9676:Vmn2r79 UTSW 7 87,037,244 (GRCm38) missense probably damaging 1.00
U15987:Vmn2r79 UTSW 7 87,004,111 (GRCm38) missense possibly damaging 0.86
X0054:Vmn2r79 UTSW 7 87,004,062 (GRCm38) missense probably benign 0.01
Z1088:Vmn2r79 UTSW 7 87,002,341 (GRCm38) missense probably damaging 1.00
Z1176:Vmn2r79 UTSW 7 87,037,169 (GRCm38) missense probably benign
Z1176:Vmn2r79 UTSW 7 87,002,318 (GRCm38) missense probably benign 0.00
Predicted Primers PCR Primer
(F):5'- TCTCTACCAGATGACTCCCAAG -3'
(R):5'- TCCATGCACAGAGTTAAGCATG -3'

Sequencing Primer
(F):5'- GATGACTCCCAAGGACACATCTC -3'
(R):5'- CCATGCACAGAGTTAAGCATGAATTC -3'
Posted On 2020-09-02