Incidental Mutation 'R7941:Psg20'
ID 649051
Institutional Source Beutler Lab
Gene Symbol Psg20
Ensembl Gene ENSMUSG00000063305
Gene Name pregnancy-specific beta-1-glycoprotein 20
Synonyms cea7, EG434540
MMRRC Submission 045987-MU
Accession Numbers
Essential gene? Probably non essential (E-score: 0.047) question?
Stock # R7941 (G1)
Quality Score 225.009
Status Validated
Chromosome 7
Chromosomal Location 18408032-18420110 bp(-) (GRCm39)
Type of Mutation critical splice acceptor site
DNA Base Change (assembly) T to A at 18415102 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change
Ref Sequence ENSEMBL: ENSMUSP00000075973 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000076677] [ENSMUST00000076677] [ENSMUST00000076677] [ENSMUST00000108482] [ENSMUST00000108482] [ENSMUST00000108482]
AlphaFold E9Q9B4
Predicted Effect probably null
Transcript: ENSMUST00000076677
SMART Domains Protein: ENSMUSP00000075973
Gene: ENSMUSG00000063305

DomainStartEndE-ValueType
IG 40 141 2.34e-4 SMART
IG 160 261 2.14e0 SMART
IG 280 381 8.01e-3 SMART
IGc2 397 461 1.47e-10 SMART
Predicted Effect probably null
Transcript: ENSMUST00000076677
SMART Domains Protein: ENSMUSP00000075973
Gene: ENSMUSG00000063305

DomainStartEndE-ValueType
IG 40 141 2.34e-4 SMART
IG 160 261 2.14e0 SMART
IG 280 381 8.01e-3 SMART
IGc2 397 461 1.47e-10 SMART
Predicted Effect probably null
Transcript: ENSMUST00000076677
SMART Domains Protein: ENSMUSP00000075973
Gene: ENSMUSG00000063305

DomainStartEndE-ValueType
IG 40 141 2.34e-4 SMART
IG 160 261 2.14e0 SMART
IG 280 381 8.01e-3 SMART
IGc2 397 461 1.47e-10 SMART
Predicted Effect probably null
Transcript: ENSMUST00000108482
SMART Domains Protein: ENSMUSP00000104122
Gene: ENSMUSG00000063305

DomainStartEndE-ValueType
IG 40 141 2.34e-4 SMART
IG 160 261 2.14e0 SMART
IG 277 378 8.01e-3 SMART
IGc2 394 458 1.47e-10 SMART
Predicted Effect probably null
Transcript: ENSMUST00000108482
SMART Domains Protein: ENSMUSP00000104122
Gene: ENSMUSG00000063305

DomainStartEndE-ValueType
IG 40 141 2.34e-4 SMART
IG 160 261 2.14e0 SMART
IG 277 378 8.01e-3 SMART
IGc2 394 458 1.47e-10 SMART
Predicted Effect probably null
Transcript: ENSMUST00000108482
SMART Domains Protein: ENSMUSP00000104122
Gene: ENSMUSG00000063305

DomainStartEndE-ValueType
IG 40 141 2.34e-4 SMART
IG 160 261 2.14e0 SMART
IG 277 378 8.01e-3 SMART
IGc2 394 458 1.47e-10 SMART
Coding Region Coverage
  • 1x: 100.0%
  • 3x: 100.0%
  • 10x: 99.7%
  • 20x: 98.9%
Validation Efficiency 98% (43/44)
Allele List at MGI
Other mutations in this stock
Total: 51 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Abl1 T C 2: 31,579,691 (GRCm39) probably benign Het
AI467606 A G 7: 126,691,593 (GRCm39) E56G probably damaging Het
Ak9 C T 10: 41,285,133 (GRCm39) P1403S unknown Het
Akr1c14 A G 13: 4,109,713 (GRCm39) K28E probably benign Het
Ampd2 C A 3: 107,987,432 (GRCm39) V134L probably benign Het
Anks1b A T 10: 90,413,017 (GRCm39) N55I probably damaging Het
Cabyr T C 18: 12,877,825 (GRCm39) L54P probably damaging Het
Cachd1 A T 4: 100,845,370 (GRCm39) N954I probably damaging Het
Cenpf A G 1: 189,389,483 (GRCm39) S1450P probably damaging Het
Chst10 T A 1: 38,910,772 (GRCm39) I131L probably damaging Het
Cluh A T 11: 74,550,583 (GRCm39) M270L probably benign Het
Dagla T C 19: 10,248,867 (GRCm39) H29R probably damaging Het
Dusp5 A G 19: 53,525,964 (GRCm39) N202S probably benign Het
Elavl3 A G 9: 21,947,612 (GRCm39) I110T possibly damaging Het
Fam222b G T 11: 78,045,885 (GRCm39) G482V possibly damaging Het
Fbxl7 A G 15: 26,543,699 (GRCm39) L316P probably damaging Het
Gad1 T A 2: 70,424,929 (GRCm39) probably null Het
H2-K2 T C 17: 34,218,305 (GRCm39) T204A probably benign Het
Hmcn1 A G 1: 150,525,835 (GRCm39) V3296A possibly damaging Het
Hyal1 T C 9: 107,455,299 (GRCm39) F203S probably damaging Het
Il16 T A 7: 83,332,037 (GRCm39) D181V probably damaging Het
Ip6k1 T C 9: 107,901,631 (GRCm39) F69L probably damaging Het
Klf4 G A 4: 55,531,755 (GRCm39) probably benign Het
Lsr T G 7: 30,672,520 (GRCm39) I27L probably benign Het
Mettl4 A T 17: 95,040,622 (GRCm39) probably null Het
Mpdz A G 4: 81,200,987 (GRCm39) V1902A probably benign Het
Nfkbiz C T 16: 55,642,307 (GRCm39) G37D probably damaging Het
Or5w11 T C 2: 87,459,248 (GRCm39) V31A probably benign Het
Otogl A T 10: 107,642,663 (GRCm39) probably null Het
Pcdh1 T C 18: 38,332,133 (GRCm39) D429G probably damaging Het
Pramel34 A T 5: 93,785,887 (GRCm39) V131D probably benign Het
Prelid2 A T 18: 42,065,816 (GRCm39) L73* probably null Het
Ptprb GAGACCCTCGGGAGCACTGCAAAGACCCTCGGGAGCACTGCAAAGACCCTCGGGAGCACTGCAAAGACCCTCGGGAGCACT GAGACCCTCGGGAGCACTGCAAAGACCCTCGGGAGCACTGCAAAGACCCTCGGGAGCACT 10: 116,119,582 (GRCm39) probably benign Het
Rab24 C T 13: 55,468,120 (GRCm39) probably null Het
Rag1 T G 2: 101,472,691 (GRCm39) K817T probably benign Het
Rgl2 T C 17: 34,150,713 (GRCm39) V57A probably benign Het
Ric1 T C 19: 29,510,659 (GRCm39) M80T probably damaging Het
Sh3rf3 T C 10: 58,842,883 (GRCm39) I283T probably damaging Het
Skint2 C A 4: 112,483,187 (GRCm39) N197K probably damaging Het
Snapc4 A G 2: 26,266,730 (GRCm39) I126T probably damaging Het
Srcap GTCCTCCTCCTCCTCCTCCTGCTCCTCCTCCTCCTCCT GTCCTCCTCCTCCTCCTGCTCCTCCTCCTCCTCCT 7: 127,157,462 (GRCm39) probably benign Het
Svip T C 7: 51,653,161 (GRCm39) K51R probably benign Het
Syndig1 T A 2: 149,741,708 (GRCm39) V98E probably benign Het
Tshz1 A T 18: 84,033,517 (GRCm39) M297K possibly damaging Het
Ttn A G 2: 76,749,694 (GRCm39) V3785A probably benign Het
Usf3 T C 16: 44,035,924 (GRCm39) S135P probably damaging Het
Vmn2r10 A T 5: 109,144,306 (GRCm39) M548K probably damaging Het
Vmn2r92 T C 17: 18,405,099 (GRCm39) S748P possibly damaging Het
Zbtb39 A G 10: 127,579,409 (GRCm39) Y661C probably damaging Het
Zfp804b A G 5: 6,820,042 (GRCm39) I1007T probably benign Het
Zscan4-ps2 A G 7: 11,251,599 (GRCm39) I212V probably benign Het
Other mutations in Psg20
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00492:Psg20 APN 7 18,408,536 (GRCm39) missense possibly damaging 0.72
IGL01459:Psg20 APN 7 18,416,638 (GRCm39) missense probably damaging 1.00
IGL01599:Psg20 APN 7 18,414,963 (GRCm39) missense possibly damaging 0.83
IGL01678:Psg20 APN 7 18,414,795 (GRCm39) missense probably damaging 1.00
IGL01991:Psg20 APN 7 18,418,350 (GRCm39) missense probably benign 0.01
IGL02449:Psg20 APN 7 18,418,333 (GRCm39) splice site probably benign
IGL02522:Psg20 APN 7 18,416,356 (GRCm39) missense probably benign 0.06
IGL03358:Psg20 APN 7 18,414,891 (GRCm39) missense probably benign 0.04
PIT4431001:Psg20 UTSW 7 18,408,475 (GRCm39) missense probably damaging 1.00
R0136:Psg20 UTSW 7 18,416,432 (GRCm39) missense probably damaging 0.98
R0184:Psg20 UTSW 7 18,419,901 (GRCm39) missense probably null 0.95
R0894:Psg20 UTSW 7 18,414,969 (GRCm39) nonsense probably null
R1291:Psg20 UTSW 7 18,418,599 (GRCm39) missense possibly damaging 0.46
R1997:Psg20 UTSW 7 18,416,535 (GRCm39) missense probably benign 0.00
R2118:Psg20 UTSW 7 18,414,947 (GRCm39) missense probably benign 0.19
R2119:Psg20 UTSW 7 18,414,947 (GRCm39) missense probably benign 0.19
R2120:Psg20 UTSW 7 18,414,947 (GRCm39) missense probably benign 0.19
R2121:Psg20 UTSW 7 18,414,947 (GRCm39) missense probably benign 0.19
R2124:Psg20 UTSW 7 18,414,947 (GRCm39) missense probably benign 0.19
R2127:Psg20 UTSW 7 18,416,643 (GRCm39) missense probably damaging 0.99
R3795:Psg20 UTSW 7 18,418,374 (GRCm39) missense probably benign 0.09
R4115:Psg20 UTSW 7 18,419,905 (GRCm39) missense probably damaging 1.00
R4238:Psg20 UTSW 7 18,418,434 (GRCm39) missense probably damaging 1.00
R5004:Psg20 UTSW 7 18,414,837 (GRCm39) missense probably damaging 1.00
R5025:Psg20 UTSW 7 18,408,291 (GRCm39) makesense probably null
R6294:Psg20 UTSW 7 18,416,604 (GRCm39) missense probably damaging 1.00
R6733:Psg20 UTSW 7 18,408,547 (GRCm39) missense probably damaging 0.99
R6744:Psg20 UTSW 7 18,408,505 (GRCm39) missense probably damaging 1.00
R6799:Psg20 UTSW 7 18,418,345 (GRCm39) missense probably benign 0.06
R7466:Psg20 UTSW 7 18,418,392 (GRCm39) missense probably benign 0.00
R7524:Psg20 UTSW 7 18,418,584 (GRCm39) missense probably benign 0.18
R7583:Psg20 UTSW 7 18,416,408 (GRCm39) missense probably damaging 1.00
R8010:Psg20 UTSW 7 18,414,992 (GRCm39) missense probably benign 0.06
R8247:Psg20 UTSW 7 18,416,562 (GRCm39) missense probably benign 0.01
R8762:Psg20 UTSW 7 18,408,557 (GRCm39) missense probably benign
R8804:Psg20 UTSW 7 18,416,584 (GRCm39) missense possibly damaging 0.90
R9138:Psg20 UTSW 7 18,418,595 (GRCm39) missense
R9279:Psg20 UTSW 7 18,416,670 (GRCm39) missense probably benign 0.06
R9683:Psg20 UTSW 7 18,416,508 (GRCm39) nonsense probably null
Predicted Primers PCR Primer
(F):5'- GCAGGGATCCATTAGTGTACCC -3'
(R):5'- ATGACAGATTCTGTGGCACTG -3'

Sequencing Primer
(F):5'- GTAGCCACTGAAAATGGACTTCATCG -3'
(R):5'- CACTGAGGGCTGTTGCTGAC -3'
Posted On 2020-09-15