Incidental Mutation 'R7951:Vmn1r173'
ID 649559
Institutional Source Beutler Lab
Gene Symbol Vmn1r173
Ensembl Gene ENSMUSG00000115021
Gene Name vomeronasal 1 receptor 173
Synonyms Gm5892
Accession Numbers
Essential gene? Possibly essential (E-score: 0.670) question?
Stock # R7951 (G1)
Quality Score 225.009
Status Not validated
Chromosome 7
Chromosomal Location 23401767-23402708 bp(+) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) C to A at 23402680 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Threonine to Lysine at position 305 (T305K)
Ref Sequence ENSEMBL: ENSMUSP00000134645 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000174055] [ENSMUST00000226233] [ENSMUST00000227987]
AlphaFold E9Q8V7
Predicted Effect unknown
Transcript: ENSMUST00000174055
AA Change: T305K
SMART Domains Protein: ENSMUSP00000134645
Gene: ENSMUSG00000115021
AA Change: T305K

DomainStartEndE-ValueType
transmembrane domain 13 35 N/A INTRINSIC
Pfam:V1R 43 301 5.3e-20 PFAM
Predicted Effect unknown
Transcript: ENSMUST00000226233
AA Change: T305K
Predicted Effect unknown
Transcript: ENSMUST00000227987
AA Change: T305K
Coding Region Coverage
  • 1x: 100.0%
  • 3x: 100.0%
  • 10x: 99.7%
  • 20x: 99.0%
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 56 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Abcg8 G A 17: 85,004,957 (GRCm39) G575S probably damaging Het
Acacb G T 5: 114,326,401 (GRCm39) A256S probably damaging Het
Adamts20 T C 15: 94,238,947 (GRCm39) D757G probably damaging Het
Adgra3 A G 5: 50,121,126 (GRCm39) V834A probably damaging Het
Adgrv1 A G 13: 81,711,689 (GRCm39) S1096P probably damaging Het
Bmal2 T G 6: 146,714,732 (GRCm39) L135R probably damaging Het
Cct4 T C 11: 22,940,868 (GRCm39) S39P probably benign Het
Cep97 T C 16: 55,725,820 (GRCm39) N689S probably benign Het
Col11a1 T A 3: 113,888,864 (GRCm39) D302E unknown Het
D5Ertd579e C T 5: 36,772,517 (GRCm39) S626N probably benign Het
Dido1 A T 2: 180,312,674 (GRCm39) C1074S probably benign Het
Dnah17 C T 11: 118,009,592 (GRCm39) R660H possibly damaging Het
Dnhd1 A T 7: 105,327,211 (GRCm39) D720V probably damaging Het
Dst T C 1: 34,240,267 (GRCm39) M1872T probably benign Het
Enpp2 T C 15: 54,783,089 (GRCm39) I13M probably benign Het
Fcho1 A G 8: 72,164,920 (GRCm39) F454L probably benign Het
Gad2 A G 2: 22,513,499 (GRCm39) K43R probably damaging Het
Galnt3 C T 2: 65,928,186 (GRCm39) E237K probably benign Het
Hey1 A G 3: 8,729,932 (GRCm39) L175P possibly damaging Het
Jade1 G A 3: 41,546,190 (GRCm39) V72M probably damaging Het
Klhl28 G A 12: 65,003,875 (GRCm39) R213W probably damaging Het
Kprp C T 3: 92,731,637 (GRCm39) R471H unknown Het
Lmtk3 A T 7: 45,435,030 (GRCm39) M27L probably benign Het
Lrp1 A T 10: 127,374,933 (GRCm39) Y4508* probably null Het
Lypd5 T C 7: 24,051,060 (GRCm39) V57A probably damaging Het
Mapk9 T G 11: 49,754,422 (GRCm39) S58R probably damaging Het
Mycbp2 T C 14: 103,452,898 (GRCm39) K1661R probably damaging Het
Myl2 C T 5: 122,244,750 (GRCm39) A140V probably benign Het
Nadk G T 4: 155,661,524 (GRCm39) D17Y probably benign Het
Nckap1l T C 15: 103,381,542 (GRCm39) Y428H probably damaging Het
Nt5c1a T C 4: 123,105,978 (GRCm39) F144S probably benign Het
Ofcc1 C T 13: 40,433,781 (GRCm39) R108Q probably benign Het
Or4c100 A T 2: 88,356,148 (GRCm39) T74S probably damaging Het
Or5d14 A T 2: 87,880,601 (GRCm39) Y122* probably null Het
Or5d40 G T 2: 88,015,616 (GRCm39) V132F probably damaging Het
Pabpc4 T G 4: 123,177,532 (GRCm39) V42G probably damaging Het
Prrc2a A T 17: 35,379,477 (GRCm39) N311K unknown Het
Rcbtb2 A T 14: 73,403,992 (GRCm39) R197* probably null Het
Rfc4 A G 16: 22,934,135 (GRCm39) I222T probably benign Het
Rsf1 GGCGGCGGC GGCGGCGGCCGCGGCGGC 7: 97,229,119 (GRCm39) probably benign Het
Rufy1 T C 11: 50,321,736 (GRCm39) D66G probably benign Het
Rxfp1 A T 3: 79,559,682 (GRCm39) C380S probably damaging Het
Scn5a A G 9: 119,358,145 (GRCm39) C699R probably damaging Het
Syngap1 G T 17: 27,185,942 (GRCm39) A1291S possibly damaging Het
Tab1 C A 15: 80,043,058 (GRCm39) N417K probably damaging Het
Tenm3 A G 8: 48,763,738 (GRCm39) V772A possibly damaging Het
Tmem25 T A 9: 44,706,790 (GRCm39) K285I probably damaging Het
Tnks2 A G 19: 36,839,555 (GRCm39) N51D Het
Trpm7 G A 2: 126,655,188 (GRCm39) T1250I possibly damaging Het
Trpv4 T C 5: 114,760,871 (GRCm39) D820G probably benign Het
Tsg101 T A 7: 46,540,891 (GRCm39) I289L probably benign Het
Tubgcp2 C A 7: 139,587,893 (GRCm39) R244L possibly damaging Het
Vmn1r53 A T 6: 90,201,132 (GRCm39) I64K possibly damaging Het
Zfp444 T C 7: 6,191,185 (GRCm39) V122A probably benign Het
Zfp599 A G 9: 22,160,764 (GRCm39) L467P probably damaging Het
Zic1 T C 9: 91,244,654 (GRCm39) E335G probably damaging Het
Other mutations in Vmn1r173
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01490:Vmn1r173 APN 7 23,402,132 (GRCm39) missense probably benign 0.01
IGL01637:Vmn1r173 APN 7 23,402,373 (GRCm39) missense probably damaging 0.96
IGL01878:Vmn1r173 APN 7 23,401,877 (GRCm39) missense probably damaging 1.00
IGL02036:Vmn1r173 APN 7 23,402,321 (GRCm39) missense probably benign 0.04
IGL02039:Vmn1r173 APN 7 23,402,321 (GRCm39) missense probably benign 0.04
IGL02171:Vmn1r173 APN 7 23,402,321 (GRCm39) missense probably benign 0.04
IGL02209:Vmn1r173 APN 7 23,402,586 (GRCm39) missense probably benign 0.25
PIT4515001:Vmn1r173 UTSW 7 23,401,911 (GRCm39) nonsense probably null
R0157:Vmn1r173 UTSW 7 23,401,822 (GRCm39) missense probably damaging 0.99
R0226:Vmn1r173 UTSW 7 23,402,508 (GRCm39) missense possibly damaging 0.65
R0482:Vmn1r173 UTSW 7 23,402,216 (GRCm39) missense probably damaging 0.99
R0792:Vmn1r173 UTSW 7 23,402,160 (GRCm39) missense probably benign 0.01
R1242:Vmn1r173 UTSW 7 23,402,650 (GRCm39) missense probably damaging 1.00
R1390:Vmn1r173 UTSW 7 23,402,323 (GRCm39) missense possibly damaging 0.82
R1641:Vmn1r173 UTSW 7 23,402,533 (GRCm39) missense probably benign 0.06
R1867:Vmn1r173 UTSW 7 23,402,660 (GRCm39) missense unknown
R2325:Vmn1r173 UTSW 7 23,402,537 (GRCm39) nonsense probably null
R3863:Vmn1r173 UTSW 7 23,401,977 (GRCm39) missense probably damaging 1.00
R4407:Vmn1r173 UTSW 7 23,402,441 (GRCm39) missense probably damaging 1.00
R4717:Vmn1r173 UTSW 7 23,402,637 (GRCm39) missense probably damaging 1.00
R4841:Vmn1r173 UTSW 7 23,402,361 (GRCm39) missense probably damaging 1.00
R4842:Vmn1r173 UTSW 7 23,402,361 (GRCm39) missense probably damaging 1.00
R5966:Vmn1r173 UTSW 7 23,402,112 (GRCm39) missense probably benign 0.00
R6022:Vmn1r173 UTSW 7 23,402,260 (GRCm39) missense probably benign 0.07
R6114:Vmn1r173 UTSW 7 23,402,254 (GRCm39) missense possibly damaging 0.53
R6657:Vmn1r173 UTSW 7 23,402,320 (GRCm39) missense probably damaging 0.98
R7165:Vmn1r173 UTSW 7 23,402,076 (GRCm39) missense probably benign 0.00
R7195:Vmn1r173 UTSW 7 23,401,884 (GRCm39) missense probably damaging 0.99
R7201:Vmn1r173 UTSW 7 23,401,583 (GRCm39) start gained probably benign
R7533:Vmn1r173 UTSW 7 23,402,071 (GRCm39) missense probably benign 0.05
R8351:Vmn1r173 UTSW 7 23,401,957 (GRCm39) nonsense probably null
R8374:Vmn1r173 UTSW 7 23,401,920 (GRCm39) missense probably damaging 0.98
R8427:Vmn1r173 UTSW 7 23,401,959 (GRCm39) missense probably damaging 0.99
R8451:Vmn1r173 UTSW 7 23,401,957 (GRCm39) nonsense probably null
R8923:Vmn1r173 UTSW 7 23,401,768 (GRCm39) start codon destroyed probably null 1.00
R9126:Vmn1r173 UTSW 7 23,402,008 (GRCm39) missense probably benign 0.23
R9506:Vmn1r173 UTSW 7 23,401,963 (GRCm39) missense probably damaging 0.99
R9557:Vmn1r173 UTSW 7 23,402,209 (GRCm39) missense probably damaging 1.00
X0022:Vmn1r173 UTSW 7 23,402,012 (GRCm39) missense probably benign 0.06
Predicted Primers PCR Primer
(F):5'- AGCATACACAATTCTCATGCTGG -3'
(R):5'- CTTCCTTCAGGGTCTCTGGATG -3'

Sequencing Primer
(F):5'- ATACACAATTCTCATGCTGGTGGTC -3'
(R):5'- CAGGGTCTCTGGATGACAATCTGAC -3'
Posted On 2020-09-15