Incidental Mutation 'R7969:Dlg2'
| ID |
650504 |
| Institutional Source |
Beutler Lab
|
| Gene Symbol |
Dlg2
|
| Ensembl Gene |
ENSMUSG00000052572 |
| Gene Name |
discs large MAGUK scaffold protein 2 |
| Synonyms |
Gm21505, Chapsyn-110, LOC382816, Dlgh2, PSD93, B330007M19Rik, A330103J02Rik, B230218P12Rik |
| MMRRC Submission |
046012-MU
|
| Accession Numbers |
|
| Essential gene? |
Non essential
(E-score: 0.000)
|
| Stock # |
R7969 (G1)
|
| Quality Score |
225.009 |
|
Status
|
Not validated
|
| Chromosome |
7 |
| Chromosomal Location |
90125880-92098455 bp(+) (GRCm39) |
| Type of Mutation |
missense |
| DNA Base Change (assembly) |
T to C
at 92066466 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Phenylalanine to Serine
at position 235
(F235S)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000095910
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000074273]
[ENSMUST00000098308]
[ENSMUST00000107193]
[ENSMUST00000107196]
[ENSMUST00000231777]
|
| AlphaFold |
Q91XM9 |
| Predicted Effect |
probably benign
Transcript: ENSMUST00000074273
AA Change: F638S
PolyPhen 2
Score 0.000 (Sensitivity: 1.00; Specificity: 0.00)
|
| SMART Domains |
Protein: ENSMUSP00000073885
Gene: ENSMUSG00000052572
AA Change: F638S
| Domain | Start | End | E-Value | Type |
|---|
|
MAGUK_N_PEST
|
14 |
97 |
1.5e-47 |
SMART |
|
PDZ
|
106 |
185 |
1.15e-23 |
SMART |
|
PDZ
|
201 |
280 |
9.86e-23 |
SMART |
|
PDZ
|
429 |
502 |
1.77e-24 |
SMART |
|
low complexity region
|
523 |
530 |
N/A |
INTRINSIC |
|
SH3
|
539 |
605 |
7.82e-10 |
SMART |
|
low complexity region
|
631 |
644 |
N/A |
INTRINSIC |
|
GuKc
|
679 |
858 |
2.6e-73 |
SMART |
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000098308
AA Change: F235S
PolyPhen 2
Score 0.225 (Sensitivity: 0.91; Specificity: 0.88)
|
| SMART Domains |
Protein: ENSMUSP00000095910
Gene: ENSMUSG00000052572
AA Change: F235S
| Domain | Start | End | E-Value | Type |
|---|
|
PDZ
|
26 |
99 |
1.77e-24 |
SMART |
|
low complexity region
|
120 |
127 |
N/A |
INTRINSIC |
|
SH3
|
136 |
202 |
7.82e-10 |
SMART |
|
low complexity region
|
228 |
241 |
N/A |
INTRINSIC |
|
GuKc
|
290 |
469 |
2.6e-73 |
SMART |
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000107193
|
| SMART Domains |
Protein: ENSMUSP00000102811
Gene: ENSMUSG00000052572
| Domain | Start | End | E-Value | Type |
|---|
|
low complexity region
|
45 |
57 |
N/A |
INTRINSIC |
|
PDZ
|
61 |
140 |
1.15e-23 |
SMART |
|
PDZ
|
156 |
235 |
9.86e-23 |
SMART |
|
PDZ
|
332 |
405 |
1.77e-24 |
SMART |
|
low complexity region
|
426 |
433 |
N/A |
INTRINSIC |
|
SH3
|
442 |
508 |
7.82e-10 |
SMART |
|
GuKc
|
564 |
743 |
2.6e-73 |
SMART |
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000107196
|
| SMART Domains |
Protein: ENSMUSP00000102814
Gene: ENSMUSG00000052572
| Domain | Start | End | E-Value | Type |
|---|
|
MAGUK_N_PEST
|
14 |
97 |
1.5e-47 |
SMART |
|
PDZ
|
106 |
185 |
1.15e-23 |
SMART |
|
PDZ
|
201 |
280 |
9.86e-23 |
SMART |
|
PDZ
|
429 |
502 |
1.77e-24 |
SMART |
|
low complexity region
|
523 |
530 |
N/A |
INTRINSIC |
|
SH3
|
539 |
605 |
7.82e-10 |
SMART |
|
GuKc
|
661 |
840 |
2.6e-73 |
SMART |
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000231777
|
| Coding Region Coverage |
- 1x: 100.0%
- 3x: 99.9%
- 10x: 99.6%
- 20x: 98.7%
|
| Validation Efficiency |
|
| MGI Phenotype |
FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes a member of the membrane-associated guanylate kinase (MAGUK) family. The encoded protein forms a heterodimer with a related family member that may interact at postsynaptic sites to form a multimeric scaffold for the clustering of receptors, ion channels, and associated signaling proteins. Multiple transcript variants encoding different isoforms have been found for this gene. Additional transcript variants have been described, but their full-length nature is not known. [provided by RefSeq, Dec 2008]
PHENOTYPE: Mice homozygous for a knock-out allele display lower surface expression of NMDA receptor (NMDAR) subunits NR2A and NR2B in dorsal horn neurons and significantly reduced NMDAR-mediated excitatory synaptic currents and NMDAR-dependent persistent inflammatory or nerve injury-induced neuropathic pain. [provided by MGI curators]
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 39 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| Adgrv1 |
A |
T |
13: 81,588,344 (GRCm39) |
V4414E |
possibly damaging |
Het |
| Ahcyl2 |
T |
A |
6: 29,870,663 (GRCm39) |
I193N |
probably damaging |
Het |
| Amotl2 |
C |
T |
9: 102,600,968 (GRCm39) |
T345I |
probably benign |
Het |
| Atf6b |
A |
T |
17: 34,867,549 (GRCm39) |
|
probably null |
Het |
| Cacna1s |
T |
G |
1: 136,004,470 (GRCm39) |
F337C |
probably damaging |
Het |
| Cep85l |
T |
C |
10: 53,174,280 (GRCm39) |
I488V |
probably damaging |
Het |
| Cmas |
T |
A |
6: 142,720,892 (GRCm39) |
D375E |
probably damaging |
Het |
| Cnga4 |
T |
C |
7: 105,055,253 (GRCm39) |
F279S |
probably damaging |
Het |
| Cyp4f37 |
T |
C |
17: 32,844,181 (GRCm39) |
V95A |
probably benign |
Het |
| Dao |
AGG |
AG |
5: 114,153,270 (GRCm39) |
|
probably benign |
Het |
| Dmxl2 |
T |
C |
9: 54,354,165 (GRCm39) |
D427G |
possibly damaging |
Het |
| Efl1 |
T |
C |
7: 82,342,178 (GRCm39) |
Y529H |
probably benign |
Het |
| Epx |
C |
T |
11: 87,763,547 (GRCm39) |
M224I |
probably benign |
Het |
| Fetub |
A |
G |
16: 22,748,449 (GRCm39) |
R101G |
possibly damaging |
Het |
| Fubp1 |
T |
A |
3: 151,927,883 (GRCm39) |
|
probably null |
Het |
| Impdh2 |
C |
T |
9: 108,439,505 (GRCm39) |
R153* |
probably null |
Het |
| Kcnj12 |
C |
T |
11: 60,960,430 (GRCm39) |
Q243* |
probably null |
Het |
| Lrrn1 |
T |
A |
6: 107,544,811 (GRCm39) |
V203E |
probably damaging |
Het |
| Meikin |
T |
C |
11: 54,300,536 (GRCm39) |
S338P |
possibly damaging |
Het |
| Myl10 |
A |
T |
5: 136,729,707 (GRCm39) |
|
probably null |
Het |
| Nt5c3b |
T |
C |
11: 100,325,567 (GRCm39) |
K120E |
possibly damaging |
Het |
| Or10al2 |
T |
A |
17: 37,983,547 (GRCm39) |
L211H |
probably damaging |
Het |
| Or2h1b |
T |
A |
17: 37,462,077 (GRCm39) |
N262I |
possibly damaging |
Het |
| Or6c1 |
G |
A |
10: 129,517,699 (GRCm39) |
T303I |
probably benign |
Het |
| Or6c75 |
T |
C |
10: 129,337,716 (GRCm39) |
L313S |
probably benign |
Het |
| Pdzd7 |
A |
G |
19: 45,024,664 (GRCm39) |
S452P |
probably benign |
Het |
| Prune2 |
A |
G |
19: 17,179,034 (GRCm39) |
I2982V |
probably damaging |
Het |
| Ptpdc1 |
G |
A |
13: 48,740,577 (GRCm39) |
R285C |
probably damaging |
Het |
| Raf1 |
T |
C |
6: 115,597,249 (GRCm39) |
D486G |
probably damaging |
Het |
| Rbm27 |
A |
T |
18: 42,408,545 (GRCm39) |
|
probably benign |
Het |
| Slit2 |
A |
G |
5: 48,461,378 (GRCm39) |
Y1475C |
possibly damaging |
Het |
| Snx14 |
G |
A |
9: 88,295,613 (GRCm39) |
T184M |
probably damaging |
Het |
| Tgm5 |
G |
T |
2: 120,905,650 (GRCm39) |
N168K |
probably damaging |
Het |
| Ugt2b38 |
A |
G |
5: 87,571,891 (GRCm39) |
V47A |
probably benign |
Het |
| Ush2a |
A |
G |
1: 188,558,568 (GRCm39) |
H3599R |
probably benign |
Het |
| Veph1 |
T |
C |
3: 66,122,896 (GRCm39) |
E211G |
possibly damaging |
Het |
| Wapl |
T |
A |
14: 34,452,604 (GRCm39) |
H832Q |
probably damaging |
Het |
| Zfp281 |
T |
A |
1: 136,553,772 (GRCm39) |
V250D |
probably benign |
Het |
| Zfp36l2 |
A |
G |
17: 84,493,252 (GRCm39) |
S462P |
unknown |
Het |
|
| Other mutations in Dlg2 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL00227:Dlg2
|
APN |
7 |
91,614,853 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL01111:Dlg2
|
APN |
7 |
91,098,971 (GRCm39) |
missense |
possibly damaging |
0.84 |
|
IGL01122:Dlg2
|
APN |
7 |
92,091,816 (GRCm39) |
missense |
possibly damaging |
0.58 |
|
IGL01296:Dlg2
|
APN |
7 |
91,589,267 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL02063:Dlg2
|
APN |
7 |
91,459,684 (GRCm39) |
splice site |
probably benign |
|
|
IGL02233:Dlg2
|
APN |
7 |
92,093,746 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL02519:Dlg2
|
APN |
7 |
91,589,323 (GRCm39) |
missense |
possibly damaging |
0.54 |
|
IGL02833:Dlg2
|
APN |
7 |
92,080,335 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL03166:Dlg2
|
APN |
7 |
91,549,938 (GRCm39) |
splice site |
probably benign |
|
|
R0932:Dlg2
|
UTSW |
7 |
92,024,845 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R1129:Dlg2
|
UTSW |
7 |
92,080,382 (GRCm39) |
splice site |
probably null |
|
|
R1245:Dlg2
|
UTSW |
7 |
92,091,803 (GRCm39) |
splice site |
probably benign |
|
|
R1319:Dlg2
|
UTSW |
7 |
92,087,231 (GRCm39) |
missense |
probably damaging |
0.98 |
|
R1464:Dlg2
|
UTSW |
7 |
91,617,406 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R1464:Dlg2
|
UTSW |
7 |
91,617,406 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R1596:Dlg2
|
UTSW |
7 |
92,080,259 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R1650:Dlg2
|
UTSW |
7 |
92,080,259 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R1868:Dlg2
|
UTSW |
7 |
92,036,160 (GRCm39) |
nonsense |
probably null |
|
|
R2006:Dlg2
|
UTSW |
7 |
91,614,825 (GRCm39) |
missense |
possibly damaging |
0.95 |
|
R2026:Dlg2
|
UTSW |
7 |
91,614,931 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R2281:Dlg2
|
UTSW |
7 |
92,087,249 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R3721:Dlg2
|
UTSW |
7 |
91,361,008 (GRCm39) |
critical splice donor site |
probably null |
|
|
R3722:Dlg2
|
UTSW |
7 |
91,361,008 (GRCm39) |
critical splice donor site |
probably null |
|
|
R3793:Dlg2
|
UTSW |
7 |
91,459,743 (GRCm39) |
splice site |
probably benign |
|
|
R4120:Dlg2
|
UTSW |
7 |
91,614,846 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4444:Dlg2
|
UTSW |
7 |
91,737,801 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4631:Dlg2
|
UTSW |
7 |
91,737,822 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4672:Dlg2
|
UTSW |
7 |
91,935,743 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4678:Dlg2
|
UTSW |
7 |
92,077,788 (GRCm39) |
missense |
possibly damaging |
0.89 |
|
R4695:Dlg2
|
UTSW |
7 |
92,087,170 (GRCm39) |
splice site |
probably null |
|
|
R5106:Dlg2
|
UTSW |
7 |
92,091,894 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R5355:Dlg2
|
UTSW |
7 |
91,099,011 (GRCm39) |
missense |
probably benign |
0.41 |
|
R5385:Dlg2
|
UTSW |
7 |
91,737,784 (GRCm39) |
missense |
probably damaging |
0.96 |
|
R5403:Dlg2
|
UTSW |
7 |
92,080,210 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R5504:Dlg2
|
UTSW |
7 |
92,091,865 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R5569:Dlg2
|
UTSW |
7 |
91,617,388 (GRCm39) |
missense |
probably benign |
0.01 |
|
R5573:Dlg2
|
UTSW |
7 |
91,646,532 (GRCm39) |
splice site |
probably null |
|
|
R5848:Dlg2
|
UTSW |
7 |
92,093,735 (GRCm39) |
missense |
probably benign |
0.41 |
|
R5863:Dlg2
|
UTSW |
7 |
91,360,987 (GRCm39) |
missense |
probably benign |
0.01 |
|
R5907:Dlg2
|
UTSW |
7 |
91,646,579 (GRCm39) |
intron |
probably benign |
|
|
R6455:Dlg2
|
UTSW |
7 |
92,093,716 (GRCm39) |
splice site |
probably null |
|
|
R6486:Dlg2
|
UTSW |
7 |
91,521,582 (GRCm39) |
critical splice acceptor site |
probably null |
|
|
R6817:Dlg2
|
UTSW |
7 |
91,614,872 (GRCm39) |
missense |
probably benign |
0.07 |
|
R7082:Dlg2
|
UTSW |
7 |
90,381,192 (GRCm39) |
missense |
probably benign |
|
|
R7667:Dlg2
|
UTSW |
7 |
92,087,364 (GRCm39) |
splice site |
probably null |
|
|
R7808:Dlg2
|
UTSW |
7 |
92,080,263 (GRCm39) |
missense |
probably benign |
0.01 |
|
R7818:Dlg2
|
UTSW |
7 |
91,589,225 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R7908:Dlg2
|
UTSW |
7 |
91,549,981 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8157:Dlg2
|
UTSW |
7 |
92,036,140 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8174:Dlg2
|
UTSW |
7 |
91,589,248 (GRCm39) |
missense |
probably benign |
0.00 |
|
R8344:Dlg2
|
UTSW |
7 |
92,087,222 (GRCm39) |
missense |
possibly damaging |
0.84 |
|
R8428:Dlg2
|
UTSW |
7 |
90,740,240 (GRCm39) |
missense |
possibly damaging |
0.66 |
|
R8443:Dlg2
|
UTSW |
7 |
92,024,875 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8463:Dlg2
|
UTSW |
7 |
91,617,441 (GRCm39) |
missense |
probably benign |
0.16 |
|
R8487:Dlg2
|
UTSW |
7 |
91,935,796 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8501:Dlg2
|
UTSW |
7 |
92,024,930 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8894:Dlg2
|
UTSW |
7 |
91,614,946 (GRCm39) |
missense |
probably benign |
0.31 |
|
R8959:Dlg2
|
UTSW |
7 |
90,501,927 (GRCm39) |
nonsense |
probably null |
|
|
R9130:Dlg2
|
UTSW |
7 |
92,080,258 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R9347:Dlg2
|
UTSW |
7 |
91,360,900 (GRCm39) |
missense |
probably benign |
0.00 |
|
R9424:Dlg2
|
UTSW |
7 |
92,080,325 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R9617:Dlg2
|
UTSW |
7 |
92,087,284 (GRCm39) |
critical splice donor site |
probably null |
|
|
R9751:Dlg2
|
UTSW |
7 |
90,564,731 (GRCm39) |
missense |
probably benign |
0.00 |
|
RF004:Dlg2
|
UTSW |
7 |
90,501,885 (GRCm39) |
missense |
probably benign |
|
|
| Predicted Primers |
PCR Primer
(F):5'- TGTCATTATCAAGACTTGGCACTCC -3'
(R):5'- CCATGTTGTTTGCCTAGGCG -3'
Sequencing Primer
(F):5'- GAAAATCAAGTCTGCCTTTCGC -3'
(R):5'- GATCACTGGTTTCCTGCT -3'
|
| Posted On |
2020-09-15 |
Incidental Mutation