Incidental Mutation 'R7969:Or6c1'
| ID |
650512 |
| Institutional Source |
Beutler Lab
|
| Gene Symbol |
Or6c1
|
| Ensembl Gene |
ENSMUSG00000093866 |
| Gene Name |
olfactory receptor family 6 subfamily C member 1 |
| Synonyms |
MOR111-1, Olfr802, GA_x6K02T2PULF-11361362-11360424 |
| MMRRC Submission |
046012-MU
|
| Accession Numbers |
|
| Essential gene? |
Non essential
(E-score: 0.000)
|
| Stock # |
R7969 (G1)
|
| Quality Score |
225.009 |
|
Status
|
Not validated
|
| Chromosome |
10 |
| Chromosomal Location |
129517668-129518606 bp(-) (GRCm39) |
| Type of Mutation |
missense |
| DNA Base Change (assembly) |
G to A
at 129517699 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Threonine to Isoleucine
at position 303
(T303I)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000144741
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000074713]
[ENSMUST00000203785]
[ENSMUST00000217576]
|
| AlphaFold |
Q8VGJ2 |
| Predicted Effect |
probably benign
Transcript: ENSMUST00000074713
AA Change: T303I
PolyPhen 2
Score 0.000 (Sensitivity: 1.00; Specificity: 0.00)
|
| SMART Domains |
Protein: ENSMUSP00000074275
Gene: ENSMUSG00000093866
AA Change: T303I
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:7tm_4
|
28 |
305 |
6.8e-56 |
PFAM |
|
Pfam:7tm_1
|
39 |
288 |
2.5e-21 |
PFAM |
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000203785
AA Change: T303I
PolyPhen 2
Score 0.000 (Sensitivity: 1.00; Specificity: 0.00)
|
| SMART Domains |
Protein: ENSMUSP00000144741
Gene: ENSMUSG00000093866
AA Change: T303I
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:7tm_4
|
28 |
305 |
6.8e-56 |
PFAM |
|
Pfam:7tm_1
|
39 |
288 |
2.5e-21 |
PFAM |
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000217576
AA Change: T303I
PolyPhen 2
Score 0.000 (Sensitivity: 1.00; Specificity: 0.00)
|
| Coding Region Coverage |
- 1x: 100.0%
- 3x: 99.9%
- 10x: 99.6%
- 20x: 98.7%
|
| Validation Efficiency |
|
| MGI Phenotype |
FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 39 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| Adgrv1 |
A |
T |
13: 81,588,344 (GRCm39) |
V4414E |
possibly damaging |
Het |
| Ahcyl2 |
T |
A |
6: 29,870,663 (GRCm39) |
I193N |
probably damaging |
Het |
| Amotl2 |
C |
T |
9: 102,600,968 (GRCm39) |
T345I |
probably benign |
Het |
| Atf6b |
A |
T |
17: 34,867,549 (GRCm39) |
|
probably null |
Het |
| Cacna1s |
T |
G |
1: 136,004,470 (GRCm39) |
F337C |
probably damaging |
Het |
| Cep85l |
T |
C |
10: 53,174,280 (GRCm39) |
I488V |
probably damaging |
Het |
| Cmas |
T |
A |
6: 142,720,892 (GRCm39) |
D375E |
probably damaging |
Het |
| Cnga4 |
T |
C |
7: 105,055,253 (GRCm39) |
F279S |
probably damaging |
Het |
| Cyp4f37 |
T |
C |
17: 32,844,181 (GRCm39) |
V95A |
probably benign |
Het |
| Dao |
AGG |
AG |
5: 114,153,270 (GRCm39) |
|
probably benign |
Het |
| Dlg2 |
T |
C |
7: 92,066,466 (GRCm39) |
F235S |
probably benign |
Het |
| Dmxl2 |
T |
C |
9: 54,354,165 (GRCm39) |
D427G |
possibly damaging |
Het |
| Efl1 |
T |
C |
7: 82,342,178 (GRCm39) |
Y529H |
probably benign |
Het |
| Epx |
C |
T |
11: 87,763,547 (GRCm39) |
M224I |
probably benign |
Het |
| Fetub |
A |
G |
16: 22,748,449 (GRCm39) |
R101G |
possibly damaging |
Het |
| Fubp1 |
T |
A |
3: 151,927,883 (GRCm39) |
|
probably null |
Het |
| Impdh2 |
C |
T |
9: 108,439,505 (GRCm39) |
R153* |
probably null |
Het |
| Kcnj12 |
C |
T |
11: 60,960,430 (GRCm39) |
Q243* |
probably null |
Het |
| Lrrn1 |
T |
A |
6: 107,544,811 (GRCm39) |
V203E |
probably damaging |
Het |
| Meikin |
T |
C |
11: 54,300,536 (GRCm39) |
S338P |
possibly damaging |
Het |
| Myl10 |
A |
T |
5: 136,729,707 (GRCm39) |
|
probably null |
Het |
| Nt5c3b |
T |
C |
11: 100,325,567 (GRCm39) |
K120E |
possibly damaging |
Het |
| Or10al2 |
T |
A |
17: 37,983,547 (GRCm39) |
L211H |
probably damaging |
Het |
| Or2h1b |
T |
A |
17: 37,462,077 (GRCm39) |
N262I |
possibly damaging |
Het |
| Or6c75 |
T |
C |
10: 129,337,716 (GRCm39) |
L313S |
probably benign |
Het |
| Pdzd7 |
A |
G |
19: 45,024,664 (GRCm39) |
S452P |
probably benign |
Het |
| Prune2 |
A |
G |
19: 17,179,034 (GRCm39) |
I2982V |
probably damaging |
Het |
| Ptpdc1 |
G |
A |
13: 48,740,577 (GRCm39) |
R285C |
probably damaging |
Het |
| Raf1 |
T |
C |
6: 115,597,249 (GRCm39) |
D486G |
probably damaging |
Het |
| Rbm27 |
A |
T |
18: 42,408,545 (GRCm39) |
|
probably benign |
Het |
| Slit2 |
A |
G |
5: 48,461,378 (GRCm39) |
Y1475C |
possibly damaging |
Het |
| Snx14 |
G |
A |
9: 88,295,613 (GRCm39) |
T184M |
probably damaging |
Het |
| Tgm5 |
G |
T |
2: 120,905,650 (GRCm39) |
N168K |
probably damaging |
Het |
| Ugt2b38 |
A |
G |
5: 87,571,891 (GRCm39) |
V47A |
probably benign |
Het |
| Ush2a |
A |
G |
1: 188,558,568 (GRCm39) |
H3599R |
probably benign |
Het |
| Veph1 |
T |
C |
3: 66,122,896 (GRCm39) |
E211G |
possibly damaging |
Het |
| Wapl |
T |
A |
14: 34,452,604 (GRCm39) |
H832Q |
probably damaging |
Het |
| Zfp281 |
T |
A |
1: 136,553,772 (GRCm39) |
V250D |
probably benign |
Het |
| Zfp36l2 |
A |
G |
17: 84,493,252 (GRCm39) |
S462P |
unknown |
Het |
|
| Other mutations in Or6c1 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL02939:Or6c1
|
APN |
10 |
129,517,857 (GRCm39) |
nonsense |
probably null |
|
|
IGL03112:Or6c1
|
APN |
10 |
129,517,792 (GRCm39) |
missense |
probably benign |
0.08 |
|
R0366:Or6c1
|
UTSW |
10 |
129,517,840 (GRCm39) |
missense |
possibly damaging |
0.72 |
|
R0463:Or6c1
|
UTSW |
10 |
129,517,708 (GRCm39) |
missense |
probably benign |
0.11 |
|
R0579:Or6c1
|
UTSW |
10 |
129,518,106 (GRCm39) |
nonsense |
probably null |
|
|
R1769:Or6c1
|
UTSW |
10 |
129,518,081 (GRCm39) |
missense |
probably benign |
0.15 |
|
R2128:Or6c1
|
UTSW |
10 |
129,518,401 (GRCm39) |
missense |
possibly damaging |
0.78 |
|
R2375:Or6c1
|
UTSW |
10 |
129,518,032 (GRCm39) |
missense |
probably benign |
0.04 |
|
R3888:Or6c1
|
UTSW |
10 |
129,518,088 (GRCm39) |
missense |
probably benign |
0.43 |
|
R3888:Or6c1
|
UTSW |
10 |
129,518,087 (GRCm39) |
missense |
possibly damaging |
0.94 |
|
R4956:Or6c1
|
UTSW |
10 |
129,517,968 (GRCm39) |
missense |
probably benign |
0.00 |
|
R5471:Or6c1
|
UTSW |
10 |
129,517,925 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R5588:Or6c1
|
UTSW |
10 |
129,517,705 (GRCm39) |
missense |
possibly damaging |
0.72 |
|
R7305:Or6c1
|
UTSW |
10 |
129,518,149 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R7995:Or6c1
|
UTSW |
10 |
129,518,509 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R9142:Or6c1
|
UTSW |
10 |
129,518,285 (GRCm39) |
missense |
probably benign |
0.03 |
|
| Predicted Primers |
PCR Primer
(F):5'- GCATCAGCTAACATGTCTTGGC -3'
(R):5'- GTCAAAGGCCTTTTCCACATG -3'
Sequencing Primer
(F):5'- CCTTAAATTTCATTCATGGGTAGGC -3'
(R):5'- ATGATTGTCATCTCCATCTCTTATGG -3'
|
| Posted On |
2020-09-15 |
Incidental Mutation