Mutagenetix > Incidental Mutation

Incidental Mutation 'R7976:Mllt10'

650881

Institutional Source

Beutler Lab

Gene Symbol

Mllt10

Ensembl Gene

ENSMUSG00000026743

Gene Name

myeloid/lymphoid or mixed-lineage leukemia; translocated to, 10

Synonyms

B130021D15Rik, D630001B22Rik, Af10

MMRRC Submission

046019-MU

Accession Numbers

Essential gene?

Possibly essential (E-score: 0.701) question?

Stock #

R7976 (G1)

Quality Score

225.009

Status

Not validated

Chromosome

Chromosomal Location

18060048-18217199 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

T to C at 18167214 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Serine to Proline at position 380 (S380P)

Ref Sequence

ENSEMBL: ENSMUSP00000028076 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000028076] [ENSMUST00000114669] [ENSMUST00000114671] [ENSMUST00000114680]

AlphaFold

O54826

Predicted Effect

possibly damaging
Transcript: ENSMUST00000028076
AA Change: S380P

PolyPhen 2 Score 0.937 (Sensitivity: 0.80; Specificity: 0.94)

SMART Domains

Protein: ENSMUSP00000028076
Gene: ENSMUSG00000026743
AA Change: S380P

Domain	Start	End	E-Value	Type
PHD	24	72	8.51e-8	SMART
PHD	136	195	2.92e-6	SMART
low complexity region	217	248	N/A	INTRINSIC
low complexity region	258	274	N/A	INTRINSIC
low complexity region	308	326	N/A	INTRINSIC
low complexity region	352	372	N/A	INTRINSIC
low complexity region	490	515	N/A	INTRINSIC
low complexity region	581	594	N/A	INTRINSIC
low complexity region	609	627	N/A	INTRINSIC
low complexity region	674	692	N/A	INTRINSIC
coiled coil region	741	782	N/A	INTRINSIC
low complexity region	836	879	N/A	INTRINSIC
low complexity region	941	952	N/A	INTRINSIC
low complexity region	966	986	N/A	INTRINSIC
low complexity region	997	1018	N/A	INTRINSIC

Predicted Effect

probably benign
Transcript: ENSMUST00000114669

SMART Domains

Protein: ENSMUSP00000110317
Gene: ENSMUSG00000026743

Domain	Start	End	E-Value	Type
low complexity region	38	51	N/A	INTRINSIC
low complexity region	66	84	N/A	INTRINSIC
low complexity region	131	149	N/A	INTRINSIC
coiled coil region	198	239	N/A	INTRINSIC
low complexity region	293	336	N/A	INTRINSIC
low complexity region	398	409	N/A	INTRINSIC
low complexity region	423	443	N/A	INTRINSIC
low complexity region	454	475	N/A	INTRINSIC

Predicted Effect

probably benign
Transcript: ENSMUST00000114671
AA Change: S302P

PolyPhen 2 Score 0.001 (Sensitivity: 0.99; Specificity: 0.15)

SMART Domains

Protein: ENSMUSP00000110319
Gene: ENSMUSG00000026743
AA Change: S302P

Domain	Start	End	E-Value	Type
PHD	58	117	2.92e-6	SMART
low complexity region	139	170	N/A	INTRINSIC
low complexity region	180	196	N/A	INTRINSIC
low complexity region	230	248	N/A	INTRINSIC
low complexity region	274	294	N/A	INTRINSIC
low complexity region	412	437	N/A	INTRINSIC
low complexity region	503	516	N/A	INTRINSIC
low complexity region	531	549	N/A	INTRINSIC
low complexity region	596	614	N/A	INTRINSIC
coiled coil region	663	704	N/A	INTRINSIC
low complexity region	758	801	N/A	INTRINSIC
low complexity region	863	874	N/A	INTRINSIC
low complexity region	888	908	N/A	INTRINSIC
low complexity region	919	940	N/A	INTRINSIC

Predicted Effect

possibly damaging
Transcript: ENSMUST00000114680
AA Change: S380P

PolyPhen 2 Score 0.937 (Sensitivity: 0.80; Specificity: 0.94)

SMART Domains

Protein: ENSMUSP00000110328
Gene: ENSMUSG00000026743
AA Change: S380P

Domain	Start	End	E-Value	Type
PHD	24	72	8.51e-8	SMART
PHD	136	195	2.92e-6	SMART
low complexity region	217	248	N/A	INTRINSIC
low complexity region	258	274	N/A	INTRINSIC
low complexity region	308	326	N/A	INTRINSIC
low complexity region	352	372	N/A	INTRINSIC
low complexity region	490	515	N/A	INTRINSIC
low complexity region	581	594	N/A	INTRINSIC
low complexity region	609	627	N/A	INTRINSIC
low complexity region	674	692	N/A	INTRINSIC
coiled coil region	741	782	N/A	INTRINSIC
low complexity region	836	879	N/A	INTRINSIC
low complexity region	941	952	N/A	INTRINSIC
low complexity region	966	986	N/A	INTRINSIC
low complexity region	997	1018	N/A	INTRINSIC

Coding Region Coverage

1x: 100.0%
3x: 100.0%
10x: 99.8%
20x: 99.2%

Validation Efficiency

MGI Phenotype

FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes a transcription factor and has been identified as a partner gene involved in several chromosomal rearrangements resulting in various leukemias. Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Sep 2010]

Allele List at MGI

Other mutations in this stock

Total: 70 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Adss1	A	C	12: 112,602,831 (GRCm39)	I341L	probably benign	Het
Aldh1b1	T	A	4: 45,803,092 (GRCm39)	M210K	possibly damaging	Het
Ankrd17	G	A	5: 90,431,451 (GRCm39)	Q778*	probably null	Het
Bmper	T	C	9: 23,318,106 (GRCm39)	V575A	probably damaging	Het
Brinp2	A	G	1: 158,073,913 (GRCm39)	V736A	probably benign	Het
Ccdc81	A	T	7: 89,515,723 (GRCm39)	L652*	probably null	Het
Cdt1	C	T	8: 123,298,585 (GRCm39)	R437W	probably damaging	Het
Ckb	A	C	12: 111,637,466 (GRCm39)	L165R	possibly damaging	Het
Col25a1	G	T	3: 130,290,075 (GRCm39)	G255V	probably damaging	Het
Ddx17	A	G	15: 79,420,156 (GRCm39)		probably null	Het
Dennd4a	G	T	9: 64,759,794 (GRCm39)	G300W	possibly damaging	Het
Dlg4	T	A	11: 69,930,008 (GRCm39)	I316N	probably damaging	Het
Dlgap2	C	T	8: 14,793,410 (GRCm39)	P467L	probably benign	Het
Dnah9	T	C	11: 65,732,227 (GRCm39)	I4226M	possibly damaging	Het
Drc1	G	A	5: 30,521,829 (GRCm39)	A734T	probably benign	Het
Entpd1	A	G	19: 40,600,865 (GRCm39)	M1V	probably null	Het
Exph5	T	G	9: 53,287,935 (GRCm39)	I1672S	possibly damaging	Het
Fam149b	T	A	14: 20,427,852 (GRCm39)	D379E	probably damaging	Het
Fgfr2	T	C	7: 129,787,074 (GRCm39)	T461A	probably damaging	Het
Frem1	A	G	4: 82,919,946 (GRCm39)	V469A	probably damaging	Het
Frem3	A	T	8: 81,338,231 (GRCm39)	K175*	probably null	Het
Fsd2	C	T	7: 81,209,629 (GRCm39)	G71E	probably benign	Het
Gcat	T	C	15: 78,919,188 (GRCm39)	I116T	probably damaging	Het
Gigyf2	G	A	1: 87,331,458 (GRCm39)	S202N	unknown	Het
Glra3	T	G	8: 56,565,911 (GRCm39)		probably null	Het
Golga4	C	T	9: 118,365,836 (GRCm39)	T296I	possibly damaging	Het
Herc1	C	T	9: 66,341,552 (GRCm39)	T1816I	possibly damaging	Het
Igfbpl1	C	A	4: 45,826,786 (GRCm39)	R3L	unknown	Het
Ighv15-2	A	T	12: 114,528,470 (GRCm39)	S28T	probably benign	Het
Kat2b	T	A	17: 53,955,835 (GRCm39)	M427K	probably benign	Het
Kdm4c	A	G	4: 74,295,906 (GRCm39)	T882A	probably damaging	Het
Kif1a	G	T	1: 92,967,496 (GRCm39)	F1138L	probably damaging	Het
Klhl20	A	T	1: 160,934,307 (GRCm39)	S237R	probably benign	Het
Lamc1	A	T	1: 153,123,014 (GRCm39)	N725K	probably damaging	Het
Lmtk3	A	G	7: 45,444,890 (GRCm39)	D1191G	unknown	Het
Ltbp1	C	A	17: 75,670,358 (GRCm39)	N1466K	possibly damaging	Het
Ly75	T	C	2: 60,195,432 (GRCm39)	E242G	probably damaging	Het
Lyrm1	T	C	7: 119,515,449 (GRCm39)	V113A	probably benign	Het
Mfsd13a	G	T	19: 46,360,446 (GRCm39)	A333S	probably benign	Het
Mrc2	A	G	11: 105,238,829 (GRCm39)	K1295E	possibly damaging	Het
Muc5ac	A	T	7: 141,363,528 (GRCm39)	I2280F	unknown	Het
Neurod2	A	C	11: 98,218,023 (GRCm39)	F380L	probably damaging	Het
Ntrk3	G	A	7: 78,005,954 (GRCm39)	A469V	probably damaging	Het
Nup205	T	C	6: 35,175,888 (GRCm39)	F584L	probably damaging	Het
Oas1d	A	T	5: 121,057,210 (GRCm39)	Y272F	probably damaging	Het
Olfm3	T	C	3: 114,874,794 (GRCm39)	V30A	probably benign	Het
Or4c110	T	A	2: 88,831,973 (GRCm39)	I220F	probably damaging	Het
Or5b117	A	G	19: 13,431,563 (GRCm39)	I106T	probably benign	Het
Or8k22	A	G	2: 86,163,064 (GRCm39)	V212A	probably benign	Het
Pcdhga12	A	G	18: 37,901,427 (GRCm39)	Y753C	probably damaging	Het
Phox2b	A	G	5: 67,253,514 (GRCm39)	V294A	unknown	Het
Prdm2	A	T	4: 142,859,812 (GRCm39)	C1159*	probably null	Het
Ptpn12	G	T	5: 21,207,631 (GRCm39)	S275*	probably null	Het
Rigi	T	C	4: 40,209,894 (GRCm39)	M725V	probably damaging	Het
Rnf223	A	T	4: 156,216,776 (GRCm39)	E50D	probably damaging	Het
Rrp12	A	T	19: 41,879,548 (GRCm39)	Y169N	probably benign	Het
Sgip1	T	C	4: 102,757,736 (GRCm39)		probably null	Het
Shank2	T	C	7: 143,964,798 (GRCm39)	I802T	probably damaging	Het
Skint2	A	T	4: 112,481,329 (GRCm39)	N64I	probably damaging	Het
Smpd3	A	C	8: 106,982,254 (GRCm39)	C617G	probably benign	Het
Tmem106c	G	C	15: 97,865,985 (GRCm39)	G192R	probably damaging	Het
Tmem72	T	C	6: 116,673,800 (GRCm39)	H106R	probably damaging	Het
Upf2	G	C	2: 6,030,926 (GRCm39)	V789L	unknown	Het
Vash1	A	G	12: 86,726,758 (GRCm39)		probably benign	Het
Vmn1r201	T	A	13: 22,658,875 (GRCm39)	Y30N	probably benign	Het
Xpr1	A	G	1: 155,166,035 (GRCm39)	F571L	possibly damaging	Het
Yif1a	T	C	19: 5,139,815 (GRCm39)	S87P	probably damaging	Het
Zer1	T	C	2: 29,997,520 (GRCm39)	Y462C	probably damaging	Het
Zfp597	G	A	16: 3,684,375 (GRCm39)	P127L	possibly damaging	Het
Zxdc	T	C	6: 90,375,749 (GRCm39)	S742P	probably benign	Het

Other mutations in Mllt10

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01646:Mllt10	APN	2	18,127,128 (GRCm39)	missense	probably damaging	1.00
IGL02366:Mllt10	APN	2	18,069,898 (GRCm39)	missense	probably damaging	0.99
IGL02990:Mllt10	APN	2	18,128,522 (GRCm39)	splice site	probably benign
IGL03034:Mllt10	APN	2	18,069,847 (GRCm39)	start codon destroyed	probably null	0.55
R0348:Mllt10	UTSW	2	18,167,424 (GRCm39)	missense	probably damaging	1.00
R0487:Mllt10	UTSW	2	18,211,948 (GRCm39)	missense	probably damaging	0.98
R0492:Mllt10	UTSW	2	18,151,698 (GRCm39)	splice site	probably benign
R0518:Mllt10	UTSW	2	18,076,017 (GRCm39)	critical splice donor site	probably null
R0720:Mllt10	UTSW	2	18,201,406 (GRCm39)	missense	probably benign
R0733:Mllt10	UTSW	2	18,208,577 (GRCm39)	intron	probably benign
R1532:Mllt10	UTSW	2	18,097,646 (GRCm39)	critical splice donor site	probably null
R1665:Mllt10	UTSW	2	18,213,601 (GRCm39)	missense	possibly damaging	0.93
R1768:Mllt10	UTSW	2	18,167,657 (GRCm39)	missense	probably damaging	1.00
R2098:Mllt10	UTSW	2	18,167,464 (GRCm39)	missense	possibly damaging	0.50
R2114:Mllt10	UTSW	2	18,167,380 (GRCm39)	missense	probably benign
R2116:Mllt10	UTSW	2	18,167,380 (GRCm39)	missense	probably benign
R2117:Mllt10	UTSW	2	18,167,380 (GRCm39)	missense	probably benign
R2179:Mllt10	UTSW	2	18,215,604 (GRCm39)	missense	probably damaging	1.00
R2192:Mllt10	UTSW	2	18,211,871 (GRCm39)	missense	probably benign	0.11
R2510:Mllt10	UTSW	2	18,069,935 (GRCm39)	missense	possibly damaging	0.94
R2511:Mllt10	UTSW	2	18,069,935 (GRCm39)	missense	possibly damaging	0.94
R4669:Mllt10	UTSW	2	18,208,444 (GRCm39)	missense	probably damaging	1.00
R5004:Mllt10	UTSW	2	18,175,079 (GRCm39)	missense	probably damaging	1.00
R5072:Mllt10	UTSW	2	18,114,685 (GRCm39)	missense	possibly damaging	0.72
R5187:Mllt10	UTSW	2	18,213,585 (GRCm39)	nonsense	probably null
R5561:Mllt10	UTSW	2	18,114,656 (GRCm39)	missense	probably damaging	0.98
R6141:Mllt10	UTSW	2	18,215,604 (GRCm39)	missense	probably damaging	1.00
R6352:Mllt10	UTSW	2	18,128,604 (GRCm39)	missense	probably damaging	1.00
R6844:Mllt10	UTSW	2	18,164,294 (GRCm39)	missense	probably benign	0.02
R7060:Mllt10	UTSW	2	18,164,371 (GRCm39)	missense	possibly damaging	0.64
R7464:Mllt10	UTSW	2	18,175,090 (GRCm39)	missense	probably benign
R7691:Mllt10	UTSW	2	18,208,423 (GRCm39)	missense	probably null	0.94
R7691:Mllt10	UTSW	2	18,208,422 (GRCm39)	missense	possibly damaging	0.94
R7937:Mllt10	UTSW	2	18,210,895 (GRCm39)	missense	probably damaging	1.00
R7956:Mllt10	UTSW	2	18,175,068 (GRCm39)	missense	probably benign	0.01
R8079:Mllt10	UTSW	2	18,128,567 (GRCm39)	missense	probably damaging	0.99
R8084:Mllt10	UTSW	2	18,114,637 (GRCm39)	missense	probably damaging	0.99
R8518:Mllt10	UTSW	2	18,151,670 (GRCm39)	missense	probably damaging	0.99
R8768:Mllt10	UTSW	2	18,167,583 (GRCm39)	missense	probably damaging	1.00
R8826:Mllt10	UTSW	2	18,167,353 (GRCm39)	missense	probably benign	0.10
R8850:Mllt10	UTSW	2	18,201,469 (GRCm39)	missense	probably benign	0.33
R8932:Mllt10	UTSW	2	18,128,617 (GRCm39)	missense	probably benign	0.31
R9009:Mllt10	UTSW	2	18,167,163 (GRCm39)	missense	probably damaging	0.96
R9129:Mllt10	UTSW	2	18,167,404 (GRCm39)	missense	probably benign	0.41
R9514:Mllt10	UTSW	2	18,164,322 (GRCm39)	missense	probably damaging	1.00
R9602:Mllt10	UTSW	2	18,211,850 (GRCm39)	missense	probably damaging	1.00
R9706:Mllt10	UTSW	2	18,151,655 (GRCm39)	missense	possibly damaging	0.50
Z1177:Mllt10	UTSW	2	18,175,887 (GRCm39)	critical splice donor site	probably null

Predicted Primers

PCR Primer
(F):5'- GTGTTAACTCAGGAGTAGGCTAC -3'
(R):5'- TCTCCAGGTGAATTGTCAAAGC -3'

Sequencing Primer
(F):5'- GGCTACAATGTAAGAGCTATGTATG -3'
(R):5'- CCAGGTGAATTGTCAAAGCTTTTAGG -3'

Posted On

2020-09-15