Incidental Mutation 'R7988:Lrrc36'
ID 651599
Institutional Source Beutler Lab
Gene Symbol Lrrc36
Ensembl Gene ENSMUSG00000054320
Gene Name leucine rich repeat containing 36
Synonyms
MMRRC Submission 046029-MU
Accession Numbers
Essential gene? Probably non essential (E-score: 0.198) question?
Stock # R7988 (G1)
Quality Score 225.009
Status Validated
Chromosome 8
Chromosomal Location 106140230-106190718 bp(+) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) C to A at 106178718 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Aspartic acid to Glutamic Acid at position 304 (D304E)
Ref Sequence ENSEMBL: ENSMUSP00000066345 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000067305] [ENSMUST00000109355] [ENSMUST00000213547] [ENSMUST00000216765]
AlphaFold Q3V0M2
Predicted Effect possibly damaging
Transcript: ENSMUST00000067305
AA Change: D304E

PolyPhen 2 Score 0.805 (Sensitivity: 0.84; Specificity: 0.93)
SMART Domains Protein: ENSMUSP00000066345
Gene: ENSMUSG00000054320
AA Change: D304E

DomainStartEndE-ValueType
low complexity region 377 389 N/A INTRINSIC
coiled coil region 478 550 N/A INTRINSIC
Predicted Effect probably damaging
Transcript: ENSMUST00000109355
AA Change: D427E

PolyPhen 2 Score 0.998 (Sensitivity: 0.27; Specificity: 0.99)
SMART Domains Protein: ENSMUSP00000104979
Gene: ENSMUSG00000054320
AA Change: D427E

DomainStartEndE-ValueType
Pfam:LRR_8 24 84 2.9e-8 PFAM
low complexity region 500 512 N/A INTRINSIC
coiled coil region 601 673 N/A INTRINSIC
Predicted Effect probably damaging
Transcript: ENSMUST00000213547
AA Change: D425E

PolyPhen 2 Score 0.998 (Sensitivity: 0.27; Specificity: 0.99)
Predicted Effect
Predicted Effect probably damaging
Transcript: ENSMUST00000216765
AA Change: D425E

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
Coding Region Coverage
  • 1x: 100.0%
  • 3x: 99.9%
  • 10x: 99.7%
  • 20x: 99.1%
Validation Efficiency 100% (59/59)
Allele List at MGI
Other mutations in this stock
Total: 61 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
0610030E20Rik C T 6: 72,324,635 (GRCm39) T56M probably damaging Het
Adamtsl5 C T 10: 80,181,372 (GRCm39) S36N probably benign Het
Adgrf5 A T 17: 43,750,704 (GRCm39) probably benign Het
Ago1 A G 4: 126,354,210 (GRCm39) F200S probably damaging Het
Akr1cl T C 1: 65,063,865 (GRCm39) D108G possibly damaging Het
Aopep A G 13: 63,208,954 (GRCm39) D357G probably benign Het
Arhgef3 A T 14: 27,123,743 (GRCm39) D468V probably benign Het
Aspn T C 13: 49,705,353 (GRCm39) C72R possibly damaging Het
Baz2b T C 2: 59,792,485 (GRCm39) T548A possibly damaging Het
Birc6 G A 17: 74,906,368 (GRCm39) probably null Het
Btnl2 A T 17: 34,577,249 (GRCm39) T135S possibly damaging Het
Ccnl1 T A 3: 65,865,282 (GRCm39) I90F possibly damaging Het
Ccnt1 T C 15: 98,463,024 (GRCm39) probably null Het
Cemip C A 7: 83,652,616 (GRCm39) probably benign Het
Cfap45 A G 1: 172,357,501 (GRCm39) D85G probably damaging Het
Cfap54 T A 10: 92,737,941 (GRCm39) D2319V unknown Het
Cma1 T C 14: 56,181,989 (GRCm39) M14V possibly damaging Het
Cmtm1 T C 8: 105,036,774 (GRCm39) probably benign Het
Col27a1 A G 4: 63,249,559 (GRCm39) H1738R unknown Het
Colq T A 14: 31,275,794 (GRCm39) D41V probably damaging Het
Cubn T C 2: 13,337,166 (GRCm39) T2437A probably benign Het
Dnah14 A G 1: 181,611,139 (GRCm39) D3755G probably damaging Het
Eprs1 A G 1: 185,150,545 (GRCm39) Y1349C probably damaging Het
Eps8 C T 6: 137,505,569 (GRCm39) R53Q possibly damaging Het
Fbf1 T C 11: 116,043,594 (GRCm39) D405G probably benign Het
Fen1 C T 19: 10,177,674 (GRCm39) E257K possibly damaging Het
Gstm7 A T 3: 107,834,271 (GRCm39) M198K possibly damaging Het
Hook3 A T 8: 26,563,675 (GRCm39) S190T probably benign Het
Htra4 A C 8: 25,520,526 (GRCm39) probably null Het
Ighv1-15 T C 12: 114,621,116 (GRCm39) I70V probably benign Het
Ikzf4 T A 10: 128,470,324 (GRCm39) N452Y probably damaging Het
Insyn2a T G 7: 134,519,427 (GRCm39) K368Q probably damaging Het
Iqcf5 T A 9: 106,393,020 (GRCm39) N92K possibly damaging Het
Itk A G 11: 46,246,661 (GRCm39) Y186H probably damaging Het
Klhdc10 T C 6: 30,446,690 (GRCm39) S282P probably benign Het
Klhl18 T A 9: 110,305,577 (GRCm39) E29V possibly damaging Het
Ky T C 9: 102,402,614 (GRCm39) S140P probably damaging Het
Lmntd2 T C 7: 140,793,550 (GRCm39) E112G unknown Het
Macf1 A T 4: 123,400,273 (GRCm39) F674Y probably damaging Het
Notch1 C T 2: 26,361,013 (GRCm39) D1111N probably benign Het
Osbpl8 T G 10: 111,107,941 (GRCm39) N312K possibly damaging Het
Otogl C T 10: 107,731,637 (GRCm39) C168Y probably damaging Het
Phldb2 T G 16: 45,645,934 (GRCm39) T171P probably benign Het
Ppef2 A T 5: 92,386,841 (GRCm39) F365L probably benign Het
Repin1 G T 6: 48,574,279 (GRCm39) E403* probably null Het
Ryr1 G A 7: 28,795,596 (GRCm39) T1105I probably benign Het
Sclt1 T A 3: 41,617,889 (GRCm39) *29L probably null Het
Scn11a T C 9: 119,594,503 (GRCm39) K1297E probably damaging Het
Serpinb9c T A 13: 33,334,262 (GRCm39) Y288F probably benign Het
Setd1a T A 7: 127,385,366 (GRCm39) M691K probably benign Het
Sftpc T C 14: 70,760,059 (GRCm39) E66G probably damaging Het
Spata31h1 T C 10: 82,131,934 (GRCm39) I359V probably benign Het
Thnsl2 T C 6: 71,118,303 (GRCm39) T42A probably benign Het
Tram1 T C 1: 13,640,199 (GRCm39) D285G probably benign Het
Ttn G A 2: 76,675,374 (GRCm39) P11137L unknown Het
Ttn C A 2: 76,727,103 (GRCm39) V5821F unknown Het
Ttn A T 2: 76,566,584 (GRCm39) I28103K probably damaging Het
Usp38 T A 8: 81,740,945 (GRCm39) M41L probably benign Het
Zcwpw1 T G 5: 137,815,753 (GRCm39) Y419D possibly damaging Het
Zfp407 G A 18: 84,577,525 (GRCm39) A1196V possibly damaging Het
Zfp446 T A 7: 12,712,970 (GRCm39) S103T possibly damaging Het
Other mutations in Lrrc36
AlleleSourceChrCoordTypePredicted EffectPPH Score
R1509:Lrrc36 UTSW 8 106,187,761 (GRCm39) missense probably damaging 1.00
R1638:Lrrc36 UTSW 8 106,176,273 (GRCm39) missense possibly damaging 0.92
R1800:Lrrc36 UTSW 8 106,176,397 (GRCm39) missense probably damaging 1.00
R2296:Lrrc36 UTSW 8 106,187,651 (GRCm39) missense possibly damaging 0.81
R4030:Lrrc36 UTSW 8 106,153,439 (GRCm39) missense probably damaging 1.00
R4059:Lrrc36 UTSW 8 106,154,428 (GRCm39) missense probably damaging 1.00
R4613:Lrrc36 UTSW 8 106,176,246 (GRCm39) missense possibly damaging 0.95
R4755:Lrrc36 UTSW 8 106,178,776 (GRCm39) missense possibly damaging 0.83
R4786:Lrrc36 UTSW 8 106,181,910 (GRCm39) missense probably benign 0.01
R4828:Lrrc36 UTSW 8 106,181,862 (GRCm39) missense probably benign 0.45
R4911:Lrrc36 UTSW 8 106,153,567 (GRCm39) missense probably benign 0.26
R5135:Lrrc36 UTSW 8 106,190,530 (GRCm39) missense probably benign
R5221:Lrrc36 UTSW 8 106,170,488 (GRCm39) missense probably damaging 0.99
R5354:Lrrc36 UTSW 8 106,151,996 (GRCm39) missense probably damaging 0.99
R5635:Lrrc36 UTSW 8 106,184,205 (GRCm39) missense probably damaging 0.97
R6793:Lrrc36 UTSW 8 106,185,065 (GRCm39) missense probably damaging 1.00
R6950:Lrrc36 UTSW 8 106,152,021 (GRCm39) splice site probably null
R6986:Lrrc36 UTSW 8 106,185,079 (GRCm39) missense probably damaging 0.99
R7231:Lrrc36 UTSW 8 106,187,689 (GRCm39) missense possibly damaging 0.46
R7326:Lrrc36 UTSW 8 106,176,401 (GRCm39) missense possibly damaging 0.92
R7349:Lrrc36 UTSW 8 106,178,900 (GRCm39) missense probably damaging 1.00
R7728:Lrrc36 UTSW 8 106,176,130 (GRCm39) missense probably benign
R7751:Lrrc36 UTSW 8 106,178,667 (GRCm39) missense possibly damaging 0.83
R8145:Lrrc36 UTSW 8 106,170,396 (GRCm39) missense probably damaging 0.96
R8195:Lrrc36 UTSW 8 106,178,717 (GRCm39) missense possibly damaging 0.90
R8380:Lrrc36 UTSW 8 106,153,460 (GRCm39) missense probably damaging 1.00
R8499:Lrrc36 UTSW 8 106,176,168 (GRCm39) missense possibly damaging 0.66
R8986:Lrrc36 UTSW 8 106,176,093 (GRCm39) missense possibly damaging 0.83
U24488:Lrrc36 UTSW 8 106,176,384 (GRCm39) missense probably benign 0.02
Predicted Primers PCR Primer
(F):5'- GCGTATGCTAAAGGGTAGTTATCATG -3'
(R):5'- AGTCAATACTTGCGCCTCG -3'

Sequencing Primer
(F):5'- GGTAGTTATCATGACCCGAGATACC -3'
(R):5'- GCCTGTAGCATCTTGGAAACC -3'
Posted On 2020-09-15