Incidental Mutation 'R8413:Or4c104'
ID 652772
Institutional Source Beutler Lab
Gene Symbol Or4c104
Ensembl Gene ENSMUSG00000089892
Gene Name olfactory receptor family 4 subfamily C member 104
Synonyms GA_x6K02T2Q125-50231574-50230642, Olfr1199, MOR230-8
MMRRC Submission 067767-MU
Accession Numbers
Essential gene? Probably non essential (E-score: 0.058) question?
Stock # R8413 (G1)
Quality Score 225.009
Status Not validated
Chromosome 2
Chromosomal Location 88586085-88590829 bp(-) (GRCm39)
Type of Mutation start gained
DNA Base Change (assembly) T to A at 88587024 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change
Ref Sequence ENSEMBL: ENSMUSP00000149809 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000099813] [ENSMUST00000124021] [ENSMUST00000131038] [ENSMUST00000213138]
AlphaFold Q8VF94
Predicted Effect probably benign
Transcript: ENSMUST00000099813
SMART Domains Protein: ENSMUSP00000097401
Gene: ENSMUSG00000089892

DomainStartEndE-ValueType
Pfam:7tm_4 29 303 4.4e-48 PFAM
Pfam:7tm_1 39 285 4.4e-22 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000124021
Predicted Effect probably benign
Transcript: ENSMUST00000131038
Predicted Effect probably benign
Transcript: ENSMUST00000213138
Coding Region Coverage
  • 1x: 100.0%
  • 3x: 99.9%
  • 10x: 99.5%
  • 20x: 98.4%
Validation Efficiency
MGI Phenotype FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]
Allele List at MGI
Other mutations in this stock
Total: 46 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Abca16 T A 7: 120,023,123 (GRCm39) D86E probably benign Het
Adamts5 A G 16: 85,663,506 (GRCm39) probably null Het
Arhgap31 T C 16: 38,423,283 (GRCm39) R928G possibly damaging Het
Birc6 T C 17: 74,853,388 (GRCm39) V164A possibly damaging Het
Cdh26 T A 2: 178,110,022 (GRCm39) H438Q probably damaging Het
Cfap65 T A 1: 74,956,328 (GRCm39) K1084* probably null Het
Csmd1 T C 8: 15,950,676 (GRCm39) H3511R probably damaging Het
Ebf1 T A 11: 44,534,274 (GRCm39) S178T possibly damaging Het
Efcab3 A C 11: 104,811,135 (GRCm39) K3192N unknown Het
Eln A G 5: 134,755,375 (GRCm39) V226A unknown Het
Fat4 A T 3: 39,063,128 (GRCm39) probably null Het
Gcn1 C T 5: 115,717,698 (GRCm39) T222I probably benign Het
Gm5624 T G 14: 44,799,347 (GRCm39) N70T Het
Gpc6 T A 14: 118,129,761 (GRCm39) V387E possibly damaging Het
Gyg1 C T 3: 20,179,619 (GRCm39) V255M probably damaging Het
Henmt1 T A 3: 108,864,965 (GRCm39) F146I probably damaging Het
Itpr3 T A 17: 27,330,900 (GRCm39) L1736Q probably damaging Het
Kcnh4 A G 11: 100,640,619 (GRCm39) V469A possibly damaging Het
Mybpc2 A G 7: 44,157,729 (GRCm39) L750P probably damaging Het
Naalad2 A G 9: 18,241,939 (GRCm39) V655A probably damaging Het
Nme8 C T 13: 19,858,689 (GRCm39) D289N probably benign Het
Or12k5 T G 2: 36,895,402 (GRCm39) T75P probably damaging Het
Or2t6 A G 14: 14,175,416 (GRCm38) V222A probably benign Het
Or4k15 C G 14: 50,364,827 (GRCm39) S264R probably benign Het
Or5aq6 T C 2: 86,923,502 (GRCm39) K80E probably benign Het
Or8g30 T A 9: 39,230,401 (GRCm39) K170* probably null Het
Phf24 T A 4: 42,937,906 (GRCm39) C173* probably null Het
Plcb2 A G 2: 118,549,304 (GRCm39) F353L probably damaging Het
Prss33 C A 17: 24,052,930 (GRCm39) W248L probably damaging Het
Rgs3 T G 4: 62,544,254 (GRCm39) L350R possibly damaging Het
Samd11 C T 4: 156,333,730 (GRCm39) G200D probably damaging Het
Sh3tc2 T A 18: 62,123,873 (GRCm39) V878E probably damaging Het
Sh3tc2 G C 18: 62,148,142 (GRCm39) G1284A probably benign Het
Skint5 A G 4: 113,572,900 (GRCm39) S780P unknown Het
Slc8a3 T C 12: 81,361,452 (GRCm39) K456E probably damaging Het
Smok2a T A 17: 13,444,499 (GRCm39) H25Q probably benign Het
Srrt A G 5: 137,298,589 (GRCm39) L225P possibly damaging Het
Stox1 C T 10: 62,500,754 (GRCm39) R602Q probably damaging Het
Tmem30a A T 9: 79,683,507 (GRCm39) C157S probably damaging Het
Tnks1bp1 T C 2: 84,892,622 (GRCm39) S850P probably damaging Het
Trpm6 A G 19: 18,809,849 (GRCm39) I1082V probably benign Het
Ttll5 T A 12: 85,965,895 (GRCm39) N646K probably benign Het
Vmn1r179 A T 7: 23,628,277 (GRCm39) Y156F probably benign Het
Vmn1r54 T A 6: 90,246,413 (GRCm39) L109H probably damaging Het
Wdr17 T C 8: 55,115,953 (GRCm39) I617V probably benign Het
Zeb2 T A 2: 44,886,183 (GRCm39) Q958L probably damaging Het
Other mutations in Or4c104
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00924:Or4c104 APN 2 88,586,500 (GRCm39) missense possibly damaging 0.83
IGL03197:Or4c104 APN 2 88,586,545 (GRCm39) missense probably damaging 0.99
R0282:Or4c104 UTSW 2 88,586,800 (GRCm39) missense probably damaging 1.00
R1564:Or4c104 UTSW 2 88,587,000 (GRCm39) missense possibly damaging 0.81
R1750:Or4c104 UTSW 2 88,586,117 (GRCm39) missense probably benign
R2139:Or4c104 UTSW 2 88,586,437 (GRCm39) missense probably damaging 1.00
R4059:Or4c104 UTSW 2 88,586,795 (GRCm39) missense probably benign
R4722:Or4c104 UTSW 2 88,586,356 (GRCm39) missense possibly damaging 0.47
R4787:Or4c104 UTSW 2 88,586,219 (GRCm39) nonsense probably null
R5595:Or4c104 UTSW 2 88,586,749 (GRCm39) missense probably damaging 0.97
R6522:Or4c104 UTSW 2 88,586,452 (GRCm39) missense probably damaging 0.99
R6825:Or4c104 UTSW 2 88,586,255 (GRCm39) missense possibly damaging 0.78
R8205:Or4c104 UTSW 2 88,587,016 (GRCm39) start codon destroyed probably null 0.94
R8302:Or4c104 UTSW 2 88,586,987 (GRCm39) missense possibly damaging 0.70
R9400:Or4c104 UTSW 2 88,586,293 (GRCm39) missense possibly damaging 0.50
R9560:Or4c104 UTSW 2 88,586,290 (GRCm39) missense possibly damaging 0.56
Z1176:Or4c104 UTSW 2 88,586,141 (GRCm39) missense probably damaging 1.00
Predicted Primers PCR Primer
(F):5'- CAAGAGCCTGGCTTGTCTTG -3'
(R):5'- GGGTTTCTTGAAACTGCAGAC -3'

Sequencing Primer
(F):5'- CCTGGCTTGTCTTGACAGTAACAATG -3'
(R):5'- AGAGTGGGTAAACAGTTCAATAATC -3'
Posted On 2020-10-20