Incidental Mutation 'R8417:Or5t7'
| ID |
652983 |
| Institutional Source |
Beutler Lab
|
| Gene Symbol |
Or5t7
|
| Ensembl Gene |
ENSMUSG00000075175 |
| Gene Name |
olfactory receptor family 5 subfamily T member 17 |
| Synonyms |
GA_x6K02T2Q125-48168771-48167839, MOR179-2, Olfr1086 |
| MMRRC Submission |
067771-MU
|
| Accession Numbers |
|
| Essential gene? |
Possibly non essential
(E-score: 0.292)
|
| Stock # |
R8417 (G1)
|
| Quality Score |
225.009 |
|
Status
|
Not validated
|
| Chromosome |
2 |
| Chromosomal Location |
86506743-86507683 bp(-) (GRCm39) |
| Type of Mutation |
missense |
| DNA Base Change (assembly) |
A to G
at 86507149 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Phenylalanine to Serine
at position 176
(F176S)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000150094
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000099878]
[ENSMUST00000213198]
|
| AlphaFold |
Q8VFL9 |
| Predicted Effect |
probably damaging
Transcript: ENSMUST00000099878
AA Change: F176S
PolyPhen 2
Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
|
| SMART Domains |
Protein: ENSMUSP00000097463
Gene: ENSMUSG00000075175
AA Change: F176S
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:7tm_4
|
29 |
306 |
3.3e-49 |
PFAM |
|
Pfam:7tm_1
|
39 |
288 |
1.4e-21 |
PFAM |
|
| Predicted Effect |
probably damaging
Transcript: ENSMUST00000213198
AA Change: F176S
PolyPhen 2
Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
|
| Coding Region Coverage |
- 1x: 100.0%
- 3x: 100.0%
- 10x: 99.8%
- 20x: 99.3%
|
| Validation Efficiency |
|
| MGI Phenotype |
FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 39 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| AB124611 |
T |
C |
9: 21,440,381 (GRCm39) |
|
probably null |
Het |
| Adamtsl1 |
G |
A |
4: 86,074,926 (GRCm39) |
D98N |
possibly damaging |
Het |
| Adgrb3 |
T |
C |
1: 25,527,134 (GRCm39) |
T601A |
probably benign |
Het |
| Ankrd33 |
C |
A |
15: 101,017,330 (GRCm39) |
Q248K |
probably benign |
Het |
| Bsn |
G |
A |
9: 107,988,651 (GRCm39) |
A2367V |
probably benign |
Het |
| Casp12 |
G |
T |
9: 5,352,263 (GRCm39) |
C155F |
probably benign |
Het |
| Ccn6 |
T |
A |
10: 39,027,207 (GRCm39) |
R342* |
probably null |
Het |
| Clpp |
T |
C |
17: 57,297,661 (GRCm39) |
V81A |
probably benign |
Het |
| Cyp3a59 |
A |
T |
5: 146,027,495 (GRCm39) |
I89F |
possibly damaging |
Het |
| Fam227b |
C |
A |
2: 125,962,982 (GRCm39) |
W178L |
probably damaging |
Het |
| Fcna |
C |
A |
2: 25,514,863 (GRCm39) |
R332L |
probably damaging |
Het |
| Gdf3 |
T |
G |
6: 122,583,566 (GRCm39) |
H267P |
probably damaging |
Het |
| Gm5592 |
A |
G |
7: 40,937,975 (GRCm39) |
D419G |
probably benign |
Het |
| Gm6882 |
A |
G |
7: 21,161,220 (GRCm39) |
V216A |
probably damaging |
Het |
| Gsdma3 |
A |
G |
11: 98,520,603 (GRCm39) |
N78S |
probably benign |
Het |
| Hsd3b9 |
G |
A |
3: 98,363,731 (GRCm39) |
T38I |
probably benign |
Het |
| Hydin |
T |
C |
8: 111,296,024 (GRCm39) |
I3579T |
probably benign |
Het |
| Ighmbp2 |
T |
C |
19: 3,311,590 (GRCm39) |
I942V |
probably damaging |
Het |
| Lamc1 |
A |
G |
1: 153,106,515 (GRCm39) |
Y1266H |
probably damaging |
Het |
| Lgi3 |
T |
C |
14: 70,772,246 (GRCm39) |
Y264H |
probably benign |
Het |
| Lmod2 |
G |
A |
6: 24,603,384 (GRCm39) |
E120K |
possibly damaging |
Het |
| Mbl2 |
G |
T |
19: 30,216,884 (GRCm39) |
C232F |
probably damaging |
Het |
| Morc1 |
T |
C |
16: 48,281,103 (GRCm39) |
V214A |
probably damaging |
Het |
| Nlrp4b |
T |
A |
7: 10,459,880 (GRCm39) |
C827* |
probably null |
Het |
| Or12k5 |
T |
A |
2: 36,894,658 (GRCm39) |
T323S |
probably benign |
Het |
| Pbrm1 |
T |
A |
14: 30,749,419 (GRCm39) |
H72Q |
possibly damaging |
Het |
| Plekhm2 |
T |
C |
4: 141,355,136 (GRCm39) |
I944V |
probably benign |
Het |
| Prdm8 |
A |
T |
5: 98,332,390 (GRCm39) |
D97V |
probably damaging |
Het |
| Preb |
G |
A |
5: 31,117,461 (GRCm39) |
|
probably benign |
Het |
| Prkcd |
T |
C |
14: 30,331,208 (GRCm39) |
K56E |
probably benign |
Het |
| Slit3 |
A |
T |
11: 35,501,438 (GRCm39) |
I391F |
probably damaging |
Het |
| Spata19 |
A |
G |
9: 27,309,266 (GRCm39) |
S91G |
probably benign |
Het |
| Stag3 |
A |
G |
5: 138,306,850 (GRCm39) |
T1134A |
probably benign |
Het |
| Tgfbr2 |
A |
T |
9: 115,939,197 (GRCm39) |
M235K |
probably benign |
Het |
| Tmtc2 |
A |
T |
10: 105,249,097 (GRCm39) |
I212N |
probably damaging |
Het |
| Tnfrsf26 |
C |
T |
7: 143,168,639 (GRCm39) |
R133K |
probably benign |
Het |
| Trim43c |
C |
A |
9: 88,725,191 (GRCm39) |
Q238K |
probably benign |
Het |
| Vcan |
T |
C |
13: 89,836,862 (GRCm39) |
D2894G |
probably benign |
Het |
| Zeb2 |
C |
T |
2: 44,913,008 (GRCm39) |
S105N |
probably damaging |
Het |
|
| Other mutations in Or5t7 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL01783:Or5t7
|
APN |
2 |
86,507,425 (GRCm39) |
missense |
probably benign |
0.00 |
|
R0492:Or5t7
|
UTSW |
2 |
86,506,834 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0629:Or5t7
|
UTSW |
2 |
86,506,873 (GRCm39) |
missense |
possibly damaging |
0.65 |
|
R1114:Or5t7
|
UTSW |
2 |
86,507,629 (GRCm39) |
missense |
possibly damaging |
0.72 |
|
R1341:Or5t7
|
UTSW |
2 |
86,507,507 (GRCm39) |
missense |
possibly damaging |
0.86 |
|
R1868:Or5t7
|
UTSW |
2 |
86,507,629 (GRCm39) |
missense |
possibly damaging |
0.72 |
|
R2183:Or5t7
|
UTSW |
2 |
86,507,380 (GRCm39) |
missense |
probably benign |
0.21 |
|
R3159:Or5t7
|
UTSW |
2 |
86,506,855 (GRCm39) |
missense |
probably benign |
0.03 |
|
R4061:Or5t7
|
UTSW |
2 |
86,507,162 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4420:Or5t7
|
UTSW |
2 |
86,507,263 (GRCm39) |
missense |
possibly damaging |
0.95 |
|
R5514:Or5t7
|
UTSW |
2 |
86,507,225 (GRCm39) |
missense |
probably benign |
0.03 |
|
R7066:Or5t7
|
UTSW |
2 |
86,507,570 (GRCm39) |
missense |
possibly damaging |
0.95 |
|
R7077:Or5t7
|
UTSW |
2 |
86,507,236 (GRCm39) |
missense |
possibly damaging |
0.78 |
|
R7246:Or5t7
|
UTSW |
2 |
86,507,633 (GRCm39) |
missense |
probably benign |
0.11 |
|
R7383:Or5t7
|
UTSW |
2 |
86,507,263 (GRCm39) |
missense |
possibly damaging |
0.95 |
|
R8062:Or5t7
|
UTSW |
2 |
86,507,410 (GRCm39) |
missense |
probably benign |
0.01 |
|
R8271:Or5t7
|
UTSW |
2 |
86,507,218 (GRCm39) |
missense |
probably benign |
0.12 |
|
R8927:Or5t7
|
UTSW |
2 |
86,507,630 (GRCm39) |
missense |
probably benign |
0.31 |
|
R8928:Or5t7
|
UTSW |
2 |
86,507,630 (GRCm39) |
missense |
probably benign |
0.31 |
|
R9029:Or5t7
|
UTSW |
2 |
86,506,831 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R9342:Or5t7
|
UTSW |
2 |
86,507,494 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R9384:Or5t7
|
UTSW |
2 |
86,507,357 (GRCm39) |
missense |
probably benign |
0.21 |
|
X0064:Or5t7
|
UTSW |
2 |
86,507,543 (GRCm39) |
missense |
probably benign |
|
|
| Predicted Primers |
PCR Primer
(F):5'- CCATGAAATGTGGACACTGCC -3'
(R):5'- ATGACCGCTATGTGGCCATTC -3'
Sequencing Primer
(F):5'- ACACTGCCATTAGGTGTGAGC -3'
(R):5'- CACAACCCTCTTATGTATGTAGTGAG -3'
|
| Posted On |
2020-10-20 |
Incidental Mutation