Mutagenetix > Incidental Mutation

Incidental Mutation 'R8437:Msl2'

654052

Institutional Source

Beutler Lab

Gene Symbol

Msl2

Ensembl Gene

ENSMUSG00000066415

Gene Name

MSL complex subunit 2

Synonyms

Msl2l1, Rnf184

MMRRC Submission

Accession Numbers

Essential gene?

Probably essential (E-score: 0.968) question?

Stock #

R8437 (G1)

Quality Score

225.009

Status

Validated

Chromosome

Chromosomal Location

101074101-101104800 bp(+) (GRCm38)

Type of Mutation

missense

DNA Base Change (assembly)

T to A at 101100968 bp (GRCm38)

Zygosity

Heterozygous

Amino Acid Change

Serine to Arginine at position 180 (S180R)

Ref Sequence

ENSEMBL: ENSMUSP00000082270 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000066773] [ENSMUST00000075941] [ENSMUST00000085177] [ENSMUST00000189616]

AlphaFold

Q69ZF8

Predicted Effect

probably benign
Transcript: ENSMUST00000066773

SMART Domains

Protein: ENSMUSP00000069688
Gene: ENSMUSG00000043154

Domain	Start	End	E-Value	Type
Blast:EFh	140	169	1e-9	BLAST
Pfam:EF-hand_7	282	380	2.6e-17	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000075941

SMART Domains

Protein: ENSMUSP00000075327
Gene: ENSMUSG00000043154

Domain	Start	End	E-Value	Type
low complexity region	248	266	N/A	INTRINSIC
Blast:EFh	760	789	1e-9	BLAST
Pfam:EF-hand_7	902	1000	2.5e-17	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000085177
AA Change: S180R

PolyPhen 2 Score 0.246 (Sensitivity: 0.91; Specificity: 0.88)

SMART Domains

Protein: ENSMUSP00000082270
Gene: ENSMUSG00000066415
AA Change: S180R

Domain	Start	End	E-Value	Type
Pfam:zf-RING_10	42	111	2.8e-36	PFAM
low complexity region	265	281	N/A	INTRINSIC
low complexity region	340	351	N/A	INTRINSIC
low complexity region	406	424	N/A	INTRINSIC
CXC	457	504	1.6e-9	SMART

Predicted Effect

probably benign
Transcript: ENSMUST00000189616

SMART Domains

Protein: ENSMUSP00000139396
Gene: ENSMUSG00000066415

Domain	Start	End	E-Value	Type
PDB:4B86\|L	1	47	2e-28	PDB

Coding Region Coverage

1x: 100.0%
3x: 100.0%
10x: 99.8%
20x: 99.2%

Validation Efficiency

100% (50/50)

Allele List at MGI

Other mutations in this stock

Total: 50 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Abhd2	T	C	7: 79,348,430	Y237H	probably damaging	Het
Adprh	T	C	16: 38,446,087	E231G	probably benign	Het
Anks6	T	C	4: 47,030,705	S631G	probably benign	Het
Bpifa5	T	A	2: 154,165,606	L156H	probably damaging	Het
Bsn	G	A	9: 108,111,452	A2367V	probably benign	Het
C8b	T	C	4: 104,786,843	Y236H	probably damaging	Het
Celf2	C	T	2: 6,547,145	G508S	probably damaging	Het
Clca1	T	C	3: 145,005,061	T794A	probably benign	Het
Col27a1	T	A	4: 63,319,464		probably benign	Het
Cyp2j12	C	T	4: 96,099,662	C497Y	probably damaging	Het
Dnmt3l	T	C	10: 78,052,768	I168T	possibly damaging	Het
Dtna	C	T	18: 23,590,341	Q201*	probably null	Het
Fetub	T	C	16: 22,934,235	S146P	possibly damaging	Het
Gak	T	G	5: 108,609,406	E242D	probably benign	Het
Gfpt2	T	A	11: 49,804,867		probably benign	Het
Ginm1	C	T	10: 7,770,366	C290Y	probably benign	Het
Hepacam	T	C	9: 37,384,710	S386P	probably damaging	Het
Hmcn2	C	A	2: 31,391,076	L1867I	probably benign	Het
Hnrnpa3	T	G	2: 75,662,675	S220A	unknown	Het
Hydin	A	G	8: 110,462,735	E1257G	probably damaging	Het
Ier3ip1	C	T	18: 76,930,178	A18V	probably damaging	Het
Ift140	T	A	17: 25,094,677	C1361S	probably damaging	Het
Il16	T	C	7: 83,652,143	Q955R	probably damaging	Het
Itpr3	T	G	17: 27,107,303	M1349R	probably damaging	Het
Kcnk4	C	T	19: 6,926,234	V316I	probably benign	Het
March6	A	G	15: 31,482,549	I501T	possibly damaging	Het
Muc16	C	T	9: 18,657,924	V1100I	unknown	Het
Nbas	T	C	12: 13,566,250	V2263A	possibly damaging	Het
Olfr1416	C	T	1: 92,480,465	S52N	probably benign	Het
Olfr853	C	T	9: 19,537,537	R131H	probably benign	Het
Pdilt	T	G	7: 119,514,886	I130L	possibly damaging	Het
Phldb3	A	G	7: 24,628,950	T640A	probably damaging	Het
Pole2	G	C	12: 69,204,187	Y467*	probably null	Het
Pxdn	C	T	12: 30,002,044	T740M	probably damaging	Het
Rabac1	T	C	7: 24,972,247	I83V	probably damaging	Het
Rrp7a	T	C	15: 83,117,572	Q245R	probably damaging	Het
Sae1	A	G	7: 16,370,354	V110A	probably damaging	Het
Sema3c	G	T	5: 17,662,938	V116F	probably damaging	Het
Serpina3i	A	G	12: 104,265,704	Y200C	probably damaging	Het
Slc25a45	C	T	19: 5,880,107	T35M	probably benign	Het
Speer4b	C	T	5: 27,498,820	R107Q	probably benign	Het
Sycp2	T	C	2: 178,364,858	T843A	probably damaging	Het
Tecta	T	A	9: 42,332,560	I2004F	probably damaging	Het
Tma16	T	C	8: 66,476,796	D182G	possibly damaging	Het
Topaz1	T	A	9: 122,781,362	Y1167*	probably null	Het
Uck1	C	A	2: 32,260,141		probably benign	Het
Usp25	A	G	16: 77,033,912	T19A	probably damaging	Het
Vpreb2	G	A	16: 17,980,889	G80S	probably damaging	Het
Wdfy4	A	G	14: 33,076,375	C2025R		Het
Zyg11a	T	A	4: 108,217,906	H6L	probably damaging	Het

Other mutations in Msl2

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00543:Msl2	APN	9	101101070	missense	probably benign	0.13
IGL02496:Msl2	APN	9	101100655	missense	possibly damaging	0.93
IGL02798:Msl2	APN	9	101075377	missense	probably benign	0.06
IGL03235:Msl2	APN	9	101100768	missense	probably benign	0.03
anguished	UTSW	9	101101975	missense	possibly damaging	0.66
Appalled	UTSW	9	101100843	missense	probably benign
Crestfallen	UTSW	9	101101091	nonsense	probably null
R0497:Msl2	UTSW	9	101101294	missense	probably benign	0.00
R1288:Msl2	UTSW	9	101102109	missense	probably benign	0.01
R2015:Msl2	UTSW	9	101075251	start gained	probably benign
R2038:Msl2	UTSW	9	101101984	missense	probably damaging	1.00
R2238:Msl2	UTSW	9	101101370	missense	probably benign	0.41
R4393:Msl2	UTSW	9	101101477	missense	probably damaging	1.00
R4827:Msl2	UTSW	9	101102151	missense	probably benign	0.00
R5290:Msl2	UTSW	9	101101407	splice site	probably null
R5567:Msl2	UTSW	9	101101737	missense	possibly damaging	0.67
R5934:Msl2	UTSW	9	101101818	missense	probably damaging	1.00
R5940:Msl2	UTSW	9	101101091	nonsense	probably null
R6339:Msl2	UTSW	9	101101750	missense	probably benign
R6736:Msl2	UTSW	9	101101002	missense	probably damaging	0.99
R6950:Msl2	UTSW	9	101101975	missense	possibly damaging	0.66
R6971:Msl2	UTSW	9	101100843	missense	probably benign
R7022:Msl2	UTSW	9	101075282	missense	possibly damaging	0.91
R7408:Msl2	UTSW	9	101102117	missense	probably benign	0.08
R7955:Msl2	UTSW	9	101102155	missense	possibly damaging	0.69
R8069:Msl2	UTSW	9	101100960	missense	probably benign
R8281:Msl2	UTSW	9	101101695	missense	probably benign	0.10
R9162:Msl2	UTSW	9	101101729	missense	probably benign
R9675:Msl2	UTSW	9	101101356	missense	probably benign

Predicted Primers

PCR Primer
(F):5'- CACTGGCACGGGATATAATAGAAGC -3'
(R):5'- AGCACAAGTCAGTGGCTACC -3'

Sequencing Primer
(F):5'- ATAGAAGCAGTTGACTGTTCTTCTG -3'
(R):5'- ACAAGTCAGTGGCTACCGTGTC -3'

Posted On

2020-10-20