Mutagenetix > Incidental Mutation

Incidental Mutation 'R8452:Ifi213'

654787

Institutional Source

Beutler Lab

Gene Symbol

Ifi213

Ensembl Gene

ENSMUSG00000073491

Gene Name

interferon activated gene 213

Synonyms

Pyr-A, Pydc4, E030037K03Rik

MMRRC Submission

067903-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.060) question?

Stock #

R8452 (G1)

Quality Score

225.009

Status

Validated

Chromosome

Chromosomal Location

173393849-173426840 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

T to C at 173422835 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Lysine to Arginine at position 10 (K10R)

Ref Sequence

ENSEMBL: ENSMUSP00000095070 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000097462] [ENSMUST00000150649] [ENSMUST00000180215]

AlphaFold

D3Z5G0

Predicted Effect

possibly damaging
Transcript: ENSMUST00000097462
AA Change: K10R

PolyPhen 2 Score 0.921 (Sensitivity: 0.81; Specificity: 0.94)

SMART Domains

Protein: ENSMUSP00000095070
Gene: ENSMUSG00000073491
AA Change: K10R

Domain	Start	End	E-Value	Type
PYRIN	10	88	3.71e-20	SMART
low complexity region	101	112	N/A	INTRINSIC

Predicted Effect

probably damaging
Transcript: ENSMUST00000150649
AA Change: K10R

PolyPhen 2 Score 0.972 (Sensitivity: 0.77; Specificity: 0.96)

SMART Domains

Protein: ENSMUSP00000117222
Gene: ENSMUSG00000073491
AA Change: K10R

Domain	Start	End	E-Value	Type
PYRIN	10	88	3.71e-20	SMART
low complexity region	101	112	N/A	INTRINSIC

Predicted Effect

possibly damaging
Transcript: ENSMUST00000180215
AA Change: K10R

PolyPhen 2 Score 0.921 (Sensitivity: 0.81; Specificity: 0.94)

SMART Domains

Protein: ENSMUSP00000136238
Gene: ENSMUSG00000073491
AA Change: K10R

Domain	Start	End	E-Value	Type
PYRIN	10	88	3.71e-20	SMART
low complexity region	101	112	N/A	INTRINSIC

Coding Region Coverage

1x: 100.0%
3x: 99.9%
10x: 99.7%
20x: 98.9%

Validation Efficiency

98% (50/51)

Allele List at MGI

Other mutations in this stock

Total: 55 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
1700123K08Rik	G	A	5: 138,561,188 (GRCm39)	T158M	probably benign	Het
Actl7b	T	A	4: 56,740,251 (GRCm39)	D369V	probably damaging	Het
Apc	A	G	18: 34,445,804 (GRCm39)	D900G	possibly damaging	Het
Bola1	G	A	3: 96,104,573 (GRCm39)	A7V	probably benign	Het
Bud13	A	G	9: 46,199,377 (GRCm39)	N246S	possibly damaging	Het
Cdkal1	G	A	13: 29,538,663 (GRCm39)	P499S	probably benign	Het
Celsr1	G	T	15: 85,917,286 (GRCm39)	S229*	probably null	Het
Cenpp	A	G	13: 49,683,887 (GRCm39)		probably null	Het
Cntnap5c	C	T	17: 58,362,687 (GRCm39)	R347W	probably damaging	Het
Cox8b	T	A	7: 140,478,929 (GRCm39)	E62V	probably null	Het
Cyp2t4	G	A	7: 26,857,162 (GRCm39)	A342T	probably benign	Het
Cyp8b1	A	G	9: 121,744,997 (GRCm39)	Y112H	probably damaging	Het
Dlg5	G	T	14: 24,241,261 (GRCm39)	A212D	probably damaging	Het
Dnah7a	T	C	1: 53,466,986 (GRCm39)	E3626G	probably null	Het
Dpys	T	C	15: 39,656,720 (GRCm39)	E449G	possibly damaging	Het
Fam187a	C	A	11: 102,777,400 (GRCm39)	C401*	probably null	Het
Fsip2	A	T	2: 82,814,937 (GRCm39)	I3557L	probably benign	Het
Gm30083	C	T	14: 33,712,279 (GRCm39)		probably null	Het
Gpr165	C	A	X: 95,757,623 (GRCm39)	D7E	probably benign	Het
H2bc7	A	G	13: 23,758,219 (GRCm39)	V49A	probably damaging	Het
Morc2b	T	C	17: 33,356,476 (GRCm39)	D432G	probably damaging	Het
Mrgpra4	T	A	7: 47,631,425 (GRCm39)	I59F	probably damaging	Het
Mttp	A	T	3: 137,818,374 (GRCm39)	D361E	probably damaging	Het
Mysm1	A	G	4: 94,863,510 (GRCm39)	S28P	probably damaging	Het
Nrdc	T	A	4: 108,876,260 (GRCm39)	V284D	probably damaging	Het
Nrip2	A	T	6: 128,384,957 (GRCm39)	D203V	probably damaging	Het
Oog4	A	T	4: 143,164,047 (GRCm39)	Y495N	probably benign	Het
Or52h1	A	T	7: 103,829,103 (GRCm39)	C171S	probably damaging	Het
Or52n4	A	T	7: 104,293,736 (GRCm39)	V281E	possibly damaging	Het
Or7g19	T	A	9: 18,856,459 (GRCm39)	L172M	possibly damaging	Het
Or8c11	A	T	9: 38,289,647 (GRCm39)	M151L	probably benign	Het
Pacrg	T	A	17: 10,795,523 (GRCm39)	R146*	probably null	Het
Pcdh18	A	T	3: 49,699,624 (GRCm39)	M946K	possibly damaging	Het
Pign	A	G	1: 105,575,917 (GRCm39)	I241T	probably benign	Het
Pik3cg	A	G	12: 32,243,639 (GRCm39)	I944T	probably damaging	Het
Ppp2r5c	T	A	12: 110,510,511 (GRCm39)	F99L	probably benign	Het
Prex1	A	T	2: 166,431,493 (GRCm39)	N756K	probably benign	Het
Prex2	A	T	1: 11,355,363 (GRCm39)	M1555L	probably benign	Het
Prex2	T	G	1: 11,355,364 (GRCm39)	M1555R	probably benign	Het
Prl3c1	T	A	13: 27,386,385 (GRCm39)	D123E	probably benign	Het
Prr22	G	A	17: 57,078,311 (GRCm39)	G155R	probably damaging	Het
Rev3l	A	G	10: 39,698,899 (GRCm39)	D1132G	probably damaging	Het
Rnf180	A	T	13: 105,318,056 (GRCm39)	F452Y	probably damaging	Het
Scn4b	A	T	9: 45,058,039 (GRCm39)	I44F	possibly damaging	Het
Selenon	A	T	4: 134,275,398 (GRCm39)		probably null	Het
Sirpb1b	T	A	3: 15,607,410 (GRCm39)	I291L	probably benign	Het
Slc12a9	C	A	5: 137,313,737 (GRCm39)	V741L	probably benign	Het
Tbc1d8	G	T	1: 39,444,438 (GRCm39)	R174S	probably damaging	Het
Tenm2	A	G	11: 35,914,428 (GRCm39)	F2370L	probably damaging	Het
Tfec	T	A	6: 16,844,202 (GRCm39)	H115L	probably damaging	Het
Tnxb	A	T	17: 34,908,381 (GRCm39)	T1345S	probably damaging	Het
Ttn	T	A	2: 76,568,831 (GRCm39)	N27354I	probably damaging	Het
Unc13c	A	G	9: 73,838,290 (GRCm39)	Y854H	probably damaging	Het
Utrn	A	T	10: 12,689,253 (GRCm39)	W11R	probably benign	Het
Vmn2r26	A	G	6: 124,016,577 (GRCm39)	Q347R	probably benign	Het

Other mutations in Ifi213

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00678:Ifi213	APN	1	173,421,619 (GRCm39)	splice site	probably benign
IGL00908:Ifi213	APN	1	173,422,649 (GRCm39)	missense	probably damaging	1.00
IGL00964:Ifi213	APN	1	173,421,518 (GRCm39)	missense	possibly damaging	0.91
IGL02217:Ifi213	APN	1	173,422,598 (GRCm39)	missense	possibly damaging	0.91
R0709:Ifi213	UTSW	1	173,417,366 (GRCm39)	missense	possibly damaging	0.70
R1518:Ifi213	UTSW	1	173,417,229 (GRCm39)	missense	probably damaging	0.99
R1559:Ifi213	UTSW	1	173,394,784 (GRCm39)	missense	probably benign	0.18
R1822:Ifi213	UTSW	1	173,417,408 (GRCm39)	missense	probably damaging	0.99
R1839:Ifi213	UTSW	1	173,417,166 (GRCm39)	missense	probably damaging	0.98
R1989:Ifi213	UTSW	1	173,396,374 (GRCm39)	critical splice donor site	probably null
R2108:Ifi213	UTSW	1	173,396,668 (GRCm39)	critical splice acceptor site	probably null
R2696:Ifi213	UTSW	1	173,417,590 (GRCm39)	missense	probably benign
R3890:Ifi213	UTSW	1	173,394,822 (GRCm39)	missense	probably benign	0.33
R4544:Ifi213	UTSW	1	173,409,693 (GRCm39)	splice site	probably null
R4611:Ifi213	UTSW	1	173,417,480 (GRCm39)	missense	possibly damaging	0.91
R4689:Ifi213	UTSW	1	173,417,986 (GRCm39)	missense	possibly damaging	0.92
R4710:Ifi213	UTSW	1	173,394,738 (GRCm39)	utr 3 prime	probably benign
R5126:Ifi213	UTSW	1	173,417,581 (GRCm39)	missense	possibly damaging	0.85
R5472:Ifi213	UTSW	1	173,394,838 (GRCm39)	splice site	probably null
R5625:Ifi213	UTSW	1	173,396,629 (GRCm39)	missense	possibly damaging	0.73
R5789:Ifi213	UTSW	1	173,396,360 (GRCm39)	splice site	probably benign
R5898:Ifi213	UTSW	1	173,396,545 (GRCm39)	missense	probably benign	0.01
R6025:Ifi213	UTSW	1	173,422,800 (GRCm39)	missense	probably damaging	0.99
R6149:Ifi213	UTSW	1	173,421,581 (GRCm39)	missense	probably benign	0.18
R6348:Ifi213	UTSW	1	173,417,848 (GRCm39)	missense	possibly damaging	0.46
R6564:Ifi213	UTSW	1	173,422,862 (GRCm39)	start codon destroyed	probably null	0.06
R7254:Ifi213	UTSW	1	173,421,529 (GRCm39)	missense	probably damaging	0.98
R7292:Ifi213	UTSW	1	173,422,691 (GRCm39)	missense	probably damaging	0.99
R7752:Ifi213	UTSW	1	173,394,784 (GRCm39)	missense	probably benign	0.18
R7901:Ifi213	UTSW	1	173,394,784 (GRCm39)	missense	probably benign	0.18
R8100:Ifi213	UTSW	1	173,422,748 (GRCm39)	missense	probably damaging	1.00
R8352:Ifi213	UTSW	1	173,422,835 (GRCm39)	missense	possibly damaging	0.92
R8425:Ifi213	UTSW	1	173,417,426 (GRCm39)	missense	probably benign
R9357:Ifi213	UTSW	1	173,396,392 (GRCm39)	missense	probably benign	0.01
RF010:Ifi213	UTSW	1	173,409,719 (GRCm39)	missense	probably damaging	0.98

Predicted Primers

PCR Primer
(F):5'- GAGCTGCAAGTTCTGGAATGTC -3'
(R):5'- TGGCATAGTTAGTAATCAATGCTCC -3'

Sequencing Primer
(F):5'- GCAAGTTCTGGAATGTCTTCAC -3'
(R):5'- CGCTCCCTAGATATGCTCTA -3'

Posted On

2020-10-20