Mutagenetix > Incidental Mutation

Incidental Mutation 'R8506:Or5b3'

655611

Institutional Source

Beutler Lab

Gene Symbol

Or5b3

Ensembl Gene

ENSMUSG00000063777

Gene Name

olfactory receptor family 5 subfamily B member 3

Synonyms

MOR202-11, Olfr1469, GA_x6K02T2RE5P-3743369-3744289

MMRRC Submission

067842-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.082) question?

Stock #

R8506 (G1)

Quality Score

225.009

Status

Not validated

Chromosome

Chromosomal Location

13387935-13388864 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

A to G at 13388604 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Threonine to Alanine at position 224 (T224A)

Ref Sequence

ENSEMBL: ENSMUSP00000150006 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000077538] [ENSMUST00000216910]

AlphaFold

Q8VFW5

Predicted Effect

possibly damaging
Transcript: ENSMUST00000077538
AA Change: T224A

PolyPhen 2 Score 0.488 (Sensitivity: 0.88; Specificity: 0.90)

SMART Domains

Protein: ENSMUSP00000076741
Gene: ENSMUSG00000063777
AA Change: T224A

Domain	Start	End	E-Value	Type
Pfam:7tm_4	32	308	2e-47	PFAM
Pfam:7tm_1	42	290	2.3e-19	PFAM

Predicted Effect

possibly damaging
Transcript: ENSMUST00000216910
AA Change: T224A

PolyPhen 2 Score 0.488 (Sensitivity: 0.88; Specificity: 0.90)

Coding Region Coverage

1x: 100.0%
3x: 99.9%
10x: 99.7%
20x: 99.1%

Validation Efficiency

MGI Phenotype

FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]

Allele List at MGI

Other mutations in this stock

Total: 69 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
9630041A04Rik	A	T	9: 101,820,171 (GRCm39)	E197V	possibly damaging	Het
Alkbh8	C	T	9: 3,335,616 (GRCm39)		probably benign	Het
Ank1	G	A	8: 23,586,851 (GRCm39)	A498T	probably damaging	Het
Antxr1	T	A	6: 87,165,155 (GRCm39)	E427D	possibly damaging	Het
App	A	C	16: 84,879,704 (GRCm39)	V143G	unknown	Het
Bod1l	C	A	5: 41,976,398 (GRCm39)	E1639*	probably null	Het
C2cd2	T	C	16: 97,676,621 (GRCm39)	D122G		Het
Ccdc88b	G	T	19: 6,824,690 (GRCm39)	P1357T	probably damaging	Het
Ccnyl1	A	G	1: 64,753,821 (GRCm39)	T211A	possibly damaging	Het
Cdc25a	T	C	9: 109,720,820 (GRCm39)	Y434H	probably damaging	Het
Ceacam16	C	A	7: 19,586,195 (GRCm39)	A106S	unknown	Het
Celsr1	G	T	15: 85,917,286 (GRCm39)	S229*	probably null	Het
Chpf2	T	C	5: 24,793,295 (GRCm39)	L87P	probably damaging	Het
Col5a2	A	T	1: 45,481,944 (GRCm39)	I60N	unknown	Het
Cux1	T	A	5: 136,337,358 (GRCm39)	E718V	probably damaging	Het
Dchs2	A	T	3: 83,208,481 (GRCm39)	I1845L	probably benign	Het
Disp3	C	T	4: 148,326,027 (GRCm39)	V1244I	possibly damaging	Het
Dnah8	T	C	17: 30,940,108 (GRCm39)	S1685P	probably benign	Het
Etnppl	G	A	3: 130,423,122 (GRCm39)	V274I	possibly damaging	Het
Evc2	T	C	5: 37,540,486 (GRCm39)	S561P	probably damaging	Het
Fga	A	G	3: 82,940,623 (GRCm39)	E759G	probably damaging	Het
Gdpd5	T	C	7: 99,103,157 (GRCm39)	F372S	probably benign	Het
Gpr155	T	C	2: 73,173,806 (GRCm39)	T868A	probably damaging	Het
Herc1	A	G	9: 66,380,863 (GRCm39)	D3580G	possibly damaging	Het
Hmbs	A	G	9: 44,252,921 (GRCm39)		probably null	Het
Ibsp	A	T	5: 104,457,947 (GRCm39)	E161D	probably damaging	Het
Ighv8-4	A	G	12: 114,987,728 (GRCm39)	V90A	possibly damaging	Het
Itpr2	A	G	6: 146,319,914 (GRCm39)		probably null	Het
Kcnc2	T	A	10: 112,291,537 (GRCm39)	F242I	probably damaging	Het
Kcnj5	A	G	9: 32,233,628 (GRCm39)	I229T	probably damaging	Het
Lamb1	A	T	12: 31,379,360 (GRCm39)	L1791F	probably damaging	Het
Med6	A	T	12: 81,641,734 (GRCm39)	M1K	probably null	Het
Mei4	A	G	9: 81,861,291 (GRCm39)	D294G	probably benign	Het
Nat10	T	C	2: 103,562,582 (GRCm39)	I585V	probably benign	Het
Nid1	T	C	13: 13,650,759 (GRCm39)	V432A	probably damaging	Het
Nlrp4c	G	T	7: 6,103,775 (GRCm39)	G903V	possibly damaging	Het
Nrf1	G	A	6: 30,126,256 (GRCm39)	A416T	probably benign	Het
Nsl1	G	C	1: 190,808,832 (GRCm39)	C173S	unknown	Het
Obsl1	G	A	1: 75,482,300 (GRCm39)	A190V	probably benign	Het
Or13a22	G	A	7: 140,073,336 (GRCm39)	V262I	probably benign	Het
Or51f1d	T	A	7: 102,700,709 (GRCm39)	M68K	probably damaging	Het
Or5w8	A	T	2: 87,688,181 (GRCm39)	I221F	probably damaging	Het
Or8k3	A	G	2: 86,058,922 (GRCm39)	L131P	possibly damaging	Het
Or8k38	T	C	2: 86,488,745 (GRCm39)	D19G	probably benign	Het
Osbpl1a	G	A	18: 12,901,643 (GRCm39)	T621I	probably benign	Het
Pabpc4l	G	A	3: 46,400,832 (GRCm39)	R271*	probably null	Het
Paics	A	T	5: 77,112,437 (GRCm39)	D307V	possibly damaging	Het
Pcdhga9	A	G	18: 37,871,737 (GRCm39)	D522G	probably damaging	Het
Pclo	T	A	5: 14,590,759 (GRCm39)	C1020S	unknown	Het
Pfkfb4	T	G	9: 108,834,667 (GRCm39)	D113E	possibly damaging	Het
Plod3	A	G	5: 137,017,830 (GRCm39)	Y202C	probably damaging	Het
Pmp22	T	A	11: 63,049,090 (GRCm39)	M111K	probably damaging	Het
Pole2	A	C	12: 69,255,734 (GRCm39)	S344A	probably benign	Het
Pom121l2	A	G	13: 22,167,789 (GRCm39)	T687A	probably benign	Het
Psmd6	A	G	14: 14,114,181 (GRCm38)	S313P	probably damaging	Het
Rd3	T	G	1: 191,715,228 (GRCm39)	M1R	probably null	Het
Rtn4ip1	G	A	10: 43,804,352 (GRCm39)	V235I	probably benign	Het
Senp5	T	C	16: 31,787,719 (GRCm39)	I635V	probably damaging	Het
Stox2	T	C	8: 47,645,108 (GRCm39)	E784G	possibly damaging	Het
Syce2	A	T	8: 85,613,795 (GRCm39)	D168V	probably benign	Het
Taar6	A	G	10: 23,861,529 (GRCm39)	S6P	probably benign	Het
Tbc1d16	A	C	11: 119,039,784 (GRCm39)	H675Q	probably damaging	Het
Tmem151b	A	T	17: 45,856,327 (GRCm39)	I371N	probably damaging	Het
Trim31	A	T	17: 37,218,150 (GRCm39)		probably null	Het
Usp48	A	G	4: 137,338,029 (GRCm39)	Y268C	probably damaging	Het
Vmn2r11	A	G	5: 109,207,270 (GRCm39)	S17P	probably benign	Het
Vmn2r110	T	A	17: 20,804,627 (GRCm39)	N98Y	probably benign	Het
Vps13b	T	A	15: 35,446,891 (GRCm39)	D515E	probably benign	Het
Yeats2	T	G	16: 19,971,684 (GRCm39)	I42M	probably damaging	Het

Other mutations in Or5b3

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01064:Or5b3	APN	19	13,388,590 (GRCm39)	missense	probably benign	0.01
IGL01520:Or5b3	APN	19	13,388,114 (GRCm39)	missense	probably damaging	0.97
IGL01671:Or5b3	APN	19	13,388,255 (GRCm39)	missense	probably benign	0.29
IGL02247:Or5b3	APN	19	13,388,831 (GRCm39)	missense	probably benign	0.01
IGL02297:Or5b3	APN	19	13,388,839 (GRCm39)	missense	probably benign	0.00
IGL02417:Or5b3	APN	19	13,388,259 (GRCm39)	missense	possibly damaging	0.52
IGL02442:Or5b3	APN	19	13,388,351 (GRCm39)	missense	probably benign	0.00
IGL02989:Or5b3	APN	19	13,388,850 (GRCm39)	missense	probably benign
IGL03269:Or5b3	APN	19	13,388,792 (GRCm39)	missense	probably damaging	0.99
IGL02988:Or5b3	UTSW	19	13,388,826 (GRCm39)	missense	possibly damaging	0.75
R0707:Or5b3	UTSW	19	13,388,784 (GRCm39)	missense	probably benign	0.22
R1055:Or5b3	UTSW	19	13,388,754 (GRCm39)	missense	probably benign	0.10
R1102:Or5b3	UTSW	19	13,388,454 (GRCm39)	missense	probably damaging	1.00
R1946:Or5b3	UTSW	19	13,388,143 (GRCm39)	missense	possibly damaging	0.64
R2111:Or5b3	UTSW	19	13,388,307 (GRCm39)	missense	probably damaging	0.99
R4072:Or5b3	UTSW	19	13,388,299 (GRCm39)	missense	possibly damaging	0.49
R4073:Or5b3	UTSW	19	13,388,299 (GRCm39)	missense	possibly damaging	0.49
R4076:Or5b3	UTSW	19	13,388,299 (GRCm39)	missense	possibly damaging	0.49
R4726:Or5b3	UTSW	19	13,388,469 (GRCm39)	missense	probably damaging	1.00
R4939:Or5b3	UTSW	19	13,388,219 (GRCm39)	missense	probably benign	0.10
R5914:Or5b3	UTSW	19	13,388,326 (GRCm39)	missense	probably benign	0.31
R6003:Or5b3	UTSW	19	13,388,403 (GRCm39)	missense	probably benign	0.34
R6743:Or5b3	UTSW	19	13,387,957 (GRCm39)	missense	probably damaging	1.00
R6825:Or5b3	UTSW	19	13,388,514 (GRCm39)	missense	probably benign	0.01
R6826:Or5b3	UTSW	19	13,388,452 (GRCm39)	missense	probably benign	0.05
R6970:Or5b3	UTSW	19	13,388,792 (GRCm39)	missense	probably damaging	0.99
R7558:Or5b3	UTSW	19	13,388,355 (GRCm39)	missense	probably damaging	1.00
R7596:Or5b3	UTSW	19	13,388,511 (GRCm39)	missense	probably benign	0.01
R7923:Or5b3	UTSW	19	13,388,182 (GRCm39)	missense	probably benign	0.17
R8014:Or5b3	UTSW	19	13,388,175 (GRCm39)	missense	not run
R8746:Or5b3	UTSW	19	13,388,092 (GRCm39)	missense	probably benign	0.44
R8803:Or5b3	UTSW	19	13,388,037 (GRCm39)	missense	probably damaging	0.99
R9112:Or5b3	UTSW	19	13,388,475 (GRCm39)	missense	probably benign	0.05
R9721:Or5b3	UTSW	19	13,388,334 (GRCm39)	missense	probably benign	0.17
Z1177:Or5b3	UTSW	19	13,388,083 (GRCm39)	missense	possibly damaging	0.94

Predicted Primers

PCR Primer
(F):5'- GGGGACACTTTCAGTCTTTCC -3'
(R):5'- TTCCGCATGCTATAGACCAG -3'

Sequencing Primer
(F):5'- CTTCTGTAGGTCTAATGTAGTGCATC -3'
(R):5'- CGCATGCTATAGACCAGAGGATTC -3'

Posted On

2020-10-20