Incidental Mutation 'R8467:Msantd5'
ID 656885
Institutional Source Beutler Lab
Gene Symbol Msantd5
Ensembl Gene ENSMUSG00000061469
Gene Name Myb/SANT DNA binding domain containing 5
Synonyms Gm12569
MMRRC Submission 067911-MU
Accession Numbers
Essential gene? Possibly non essential (E-score: 0.297) question?
Stock # R8467 (G1)
Quality Score 225.009
Status Validated
Chromosome 11
Chromosomal Location 51111300-51125880 bp(+) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) A to G at 51125105 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Isoleucine to Valine at position 108 (I108V)
Ref Sequence ENSEMBL: ENSMUSP00000155969 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000074198] [ENSMUST00000126189]
AlphaFold A0A338P6G8
Predicted Effect possibly damaging
Transcript: ENSMUST00000074198
AA Change: I52V

PolyPhen 2 Score 0.455 (Sensitivity: 0.89; Specificity: 0.90)
Predicted Effect possibly damaging
Transcript: ENSMUST00000126189
AA Change: I108V

PolyPhen 2 Score 0.455 (Sensitivity: 0.89; Specificity: 0.90)
Coding Region Coverage
  • 1x: 100.0%
  • 3x: 100.0%
  • 10x: 99.7%
  • 20x: 99.2%
Validation Efficiency 100% (38/38)
Allele List at MGI
Other mutations in this stock
Total: 37 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Apon G A 10: 128,091,002 (GRCm39) V227I probably benign Het
Arl9 T C 5: 77,154,446 (GRCm39) I58T probably damaging Het
C4b T C 17: 34,951,787 (GRCm39) T1326A possibly damaging Het
Cd55b A C 1: 130,347,501 (GRCm39) S103R possibly damaging Het
Cep350 A G 1: 155,791,321 (GRCm39) F1268L probably benign Het
D17H6S53E T A 17: 35,346,246 (GRCm39) D52E probably damaging Het
Dhx57 G C 17: 80,561,853 (GRCm39) P887R probably damaging Het
Ehd1 T G 19: 6,331,318 (GRCm39) S159A probably benign Het
Fam98a C A 17: 75,851,830 (GRCm39) G84W probably damaging Het
Fbxl22 C T 9: 66,421,849 (GRCm39) probably null Het
Gbp11 T A 5: 105,475,457 (GRCm39) Y297F probably damaging Het
Gimap8 A G 6: 48,627,269 (GRCm39) H81R probably benign Het
Gpd2 A G 2: 57,254,596 (GRCm39) E680G possibly damaging Het
Grid2 A G 6: 64,510,635 (GRCm39) D755G probably benign Het
Hivep3 T C 4: 119,952,238 (GRCm39) Y185H probably damaging Het
Hunk A G 16: 90,293,508 (GRCm39) R597G probably damaging Het
Igfbp3 A G 11: 7,163,523 (GRCm39) C90R probably damaging Het
Il7r T C 15: 9,512,973 (GRCm39) T179A probably benign Het
Iqsec3 G A 6: 121,358,676 (GRCm39) T1003I probably benign Het
Kif13b A T 14: 64,996,154 (GRCm39) D980V probably damaging Het
Kif21b A G 1: 136,100,021 (GRCm39) D1525G probably damaging Het
Lgsn A G 1: 31,242,731 (GRCm39) E271G probably benign Het
Lrp1 G A 10: 127,394,519 (GRCm39) R2565C probably damaging Het
Marchf10 A T 11: 105,280,979 (GRCm39) Y435* probably null Het
Mup9 C T 4: 60,376,481 (GRCm39) probably null Het
Myo6 T A 9: 80,136,168 (GRCm39) V97E probably damaging Het
Nobox G T 6: 43,282,479 (GRCm39) D309E probably benign Het
Nup155 A G 15: 8,151,015 (GRCm39) D355G probably benign Het
Or6n1 A T 1: 173,917,007 (GRCm39) T134S probably benign Het
Otud7b A G 3: 96,062,993 (GRCm39) D744G probably benign Het
Phgdh A G 3: 98,228,627 (GRCm39) V182A probably benign Het
Scarb1 A T 5: 125,375,731 (GRCm39) I231N probably damaging Het
Scn9a A G 2: 66,332,015 (GRCm39) L1276P probably damaging Het
Smarca2 T A 19: 26,597,121 (GRCm39) M1K probably null Het
Sp3 G A 2: 72,801,482 (GRCm39) T177I possibly damaging Het
Vmn1r21 A T 6: 57,821,441 (GRCm39) M1K probably null Het
Zfyve16 A T 13: 92,644,790 (GRCm39) H1137Q probably damaging Het
Other mutations in Msantd5
AlleleSourceChrCoordTypePredicted EffectPPH Score
R4352:Msantd5 UTSW 11 51,125,646 (GRCm39) missense possibly damaging 0.94
R5214:Msantd5 UTSW 11 51,125,675 (GRCm39) missense possibly damaging 0.87
R7648:Msantd5 UTSW 11 51,125,613 (GRCm39) missense possibly damaging 0.94
R7650:Msantd5 UTSW 11 51,125,613 (GRCm39) missense possibly damaging 0.94
R7890:Msantd5 UTSW 11 51,125,665 (GRCm39) missense probably damaging 0.96
R7892:Msantd5 UTSW 11 51,125,613 (GRCm39) missense possibly damaging 0.94
R8512:Msantd5 UTSW 11 51,125,487 (GRCm39) missense probably benign 0.17
R9124:Msantd5 UTSW 11 51,125,481 (GRCm39) missense probably benign
Predicted Primers PCR Primer
(F):5'- CATTCCCGTAGCTCATGGAC -3'
(R):5'- GATTCCCACACTGTGTGTTCTG -3'

Sequencing Primer
(F):5'- GGACCGACTCTGAAATCAGGATCTTC -3'
(R):5'- CTGCTCTGTGCTCATGAAGGAC -3'
Posted On 2021-01-18