Mutagenetix > Incidental Mutation

Incidental Mutation 'R8469:4932438H23Rik'

656970

Institutional Source

Beutler Lab

Gene Symbol

4932438H23Rik

Ensembl Gene

ENSMUSG00000039851

Gene Name

RIKEN cDNA 4932438H23 gene

Synonyms

MMRRC Submission

067913-MU

Accession Numbers

Essential gene?

Non essential (E-score: 0.000) question?

Stock #

R8469 (G1)

Quality Score

225.009

Status

Validated

Chromosome

Chromosomal Location

90841534-90866040 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

A to G at 90852797 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Phenylalanine to Serine at position 113 (F113S)

Ref Sequence

ENSEMBL: ENSMUSP00000122640 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000035689] [ENSMUST00000114076] [ENSMUST00000146047]

AlphaFold

no structure available at present

Predicted Effect

probably damaging
Transcript: ENSMUST00000035689
AA Change: F113S

PolyPhen 2 Score 0.996 (Sensitivity: 0.55; Specificity: 0.98)

SMART Domains

Protein: ENSMUSP00000040111
Gene: ENSMUSG00000039851
AA Change: F113S

Domain	Start	End	E-Value	Type
Pfam:DUF4571	19	230	8.6e-115	PFAM

Predicted Effect

probably damaging
Transcript: ENSMUST00000114076
AA Change: F113S

PolyPhen 2 Score 0.996 (Sensitivity: 0.55; Specificity: 0.98)

SMART Domains

Protein: ENSMUSP00000109710
Gene: ENSMUSG00000039851
AA Change: F113S

Domain	Start	End	E-Value	Type
Pfam:DUF4571	20	230	2.2e-103	PFAM

Predicted Effect

probably damaging
Transcript: ENSMUST00000146047
AA Change: F113S

PolyPhen 2 Score 0.996 (Sensitivity: 0.55; Specificity: 0.98)

SMART Domains

Protein: ENSMUSP00000122640
Gene: ENSMUSG00000039851
AA Change: F113S

Domain	Start	End	E-Value	Type
Pfam:DUF4571	19	136	4.1e-66	PFAM

Coding Region Coverage

1x: 100.0%
3x: 100.0%
10x: 99.7%
20x: 99.1%

Validation Efficiency

98% (41/42)

Allele List at MGI

Other mutations in this stock

Total: 42 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Abcd4	A	G	12: 84,659,190 (GRCm39)	Y189H	probably damaging	Het
Actn1	T	C	12: 80,240,457 (GRCm39)	D210G	possibly damaging	Het
Adam28	C	T	14: 68,844,029 (GRCm39)	V774I	probably benign	Het
Anapc1	A	T	2: 128,500,264 (GRCm39)		probably null	Het
Atg2b	A	T	12: 105,604,170 (GRCm39)	I1577N	probably benign	Het
Bod1l	A	G	5: 41,978,834 (GRCm39)	S827P	possibly damaging	Het
Carmil1	A	T	13: 24,296,011 (GRCm39)	C377S	probably damaging	Het
Cplx4	T	C	18: 66,090,083 (GRCm39)	E112G	possibly damaging	Het
Cyp4f39	C	A	17: 32,711,340 (GRCm39)	R496S	probably damaging	Het
Dmgdh	G	A	13: 93,843,175 (GRCm39)	R337Q	probably damaging	Het
Dnah10	T	C	5: 124,813,895 (GRCm39)	F345S	probably damaging	Het
Dst	A	G	1: 34,268,109 (GRCm39)	R2844G	probably damaging	Het
Fam186a	T	A	15: 99,845,186 (GRCm39)	I353L	unknown	Het
Fam78a	A	G	2: 31,959,345 (GRCm39)	V255A	possibly damaging	Het
Ino80	T	A	2: 119,210,074 (GRCm39)	I1406L	probably benign	Het
Itga11	T	C	9: 62,678,680 (GRCm39)	F949S	probably benign	Het
Jmjd7	G	A	2: 119,860,643 (GRCm39)	A57T	possibly damaging	Het
Krt1c	T	C	15: 101,724,804 (GRCm39)	T269A	probably benign	Het
Lgi4	A	T	7: 30,767,065 (GRCm39)	D364V	probably damaging	Het
Lrp12	T	C	15: 39,735,791 (GRCm39)	T733A	probably damaging	Het
Marchf7	T	A	2: 60,064,670 (GRCm39)	N315K	probably benign	Het
Methig1	A	G	15: 100,251,130 (GRCm39)	I14V	probably benign	Het
Mtmr3	A	T	11: 4,481,223 (GRCm39)	M1K	probably null	Het
Nras	A	G	3: 102,966,217 (GRCm39)		probably benign	Het
Nsd1	A	G	13: 55,425,366 (GRCm39)	T1508A	possibly damaging	Het
Obscn	T	C	11: 59,019,063 (GRCm39)	T917A	probably damaging	Het
Pard6g	T	C	18: 80,090,347 (GRCm39)	V21A	possibly damaging	Het
Pcdha5	T	A	18: 37,094,798 (GRCm39)	W436R	probably benign	Het
Pde4d	T	C	13: 108,996,722 (GRCm39)	V8A	probably benign	Het
Pou4f3	C	T	18: 42,528,339 (GRCm39)	T94M	probably benign	Het
Prdm6	G	T	18: 53,597,758 (GRCm39)		probably benign	Het
Ralgapa1	T	C	12: 55,786,198 (GRCm39)	R674G	probably damaging	Het
Rcc1	A	G	4: 132,061,445 (GRCm39)	S368P	probably damaging	Het
Rcn2	T	A	9: 55,952,485 (GRCm39)	V110E	probably benign	Het
Reep4	T	A	14: 70,783,180 (GRCm39)		probably null	Het
Rrbp1	T	C	2: 143,831,661 (GRCm39)	I169V	probably damaging	Het
Slc2a6	T	C	2: 26,914,347 (GRCm39)	S257G	probably benign	Het
Spag9	A	G	11: 93,982,627 (GRCm39)	R612G	probably damaging	Het
Ssh2	A	G	11: 77,340,434 (GRCm39)	T529A	probably benign	Het
Triobp	A	G	15: 78,851,219 (GRCm39)	S458G	probably benign	Het
Zfp729a	G	T	13: 67,769,481 (GRCm39)	H249Q	probably damaging	Het
Zfp940	A	G	7: 29,544,572 (GRCm39)	I445T	possibly damaging	Het

Other mutations in 4932438H23Rik

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00686:4932438H23Rik	APN	16	90,852,489 (GRCm39)	missense	possibly damaging	0.90
IGL01934:4932438H23Rik	APN	16	90,852,753 (GRCm39)	missense	probably damaging	1.00
IGL02060:4932438H23Rik	APN	16	90,852,603 (GRCm39)	missense	probably damaging	0.99
IGL02244:4932438H23Rik	APN	16	90,853,085 (GRCm39)	missense	probably benign	0.23
IGL02623:4932438H23Rik	APN	16	90,853,032 (GRCm39)	missense	probably benign	0.02
PIT4810001:4932438H23Rik	UTSW	16	90,852,822 (GRCm39)	missense	probably damaging	1.00
R0135:4932438H23Rik	UTSW	16	90,852,515 (GRCm39)	missense	probably damaging	0.99
R0932:4932438H23Rik	UTSW	16	90,852,995 (GRCm39)	missense	probably benign	0.00
R4591:4932438H23Rik	UTSW	16	90,852,959 (GRCm39)	missense	probably damaging	0.99
R6472:4932438H23Rik	UTSW	16	90,852,891 (GRCm39)	missense	probably benign	0.00
R6513:4932438H23Rik	UTSW	16	90,852,654 (GRCm39)	missense	probably benign	0.00
R7067:4932438H23Rik	UTSW	16	90,852,921 (GRCm39)	missense	probably damaging	1.00
R7472:4932438H23Rik	UTSW	16	90,852,744 (GRCm39)	missense	probably benign	0.06
R8369:4932438H23Rik	UTSW	16	90,852,657 (GRCm39)	missense	probably benign	0.07
R8508:4932438H23Rik	UTSW	16	90,852,500 (GRCm39)	missense	probably damaging	1.00
R8680:4932438H23Rik	UTSW	16	90,852,551 (GRCm39)	missense	probably damaging	1.00
R8884:4932438H23Rik	UTSW	16	90,852,737 (GRCm39)	missense	probably damaging	1.00
R9166:4932438H23Rik	UTSW	16	90,853,046 (GRCm39)	missense	possibly damaging	0.94
R9335:4932438H23Rik	UTSW	16	90,852,830 (GRCm39)	missense	probably damaging	1.00
R9390:4932438H23Rik	UTSW	16	90,853,096 (GRCm39)	missense	probably benign	0.23
Z1088:4932438H23Rik	UTSW	16	90,852,701 (GRCm39)	missense	probably benign	0.01

Predicted Primers

PCR Primer
(F):5'- CCGTTGAAAAGAGCCACATC -3'
(R):5'- ATACCATTCGCAACTGCAGCTG -3'

Sequencing Primer
(F):5'- ACATGTTTGCCAGCCTTTGTACAAG -3'
(R):5'- TGCCCAGTAGACATCAGGGAC -3'

Posted On

2021-01-18