Mutagenetix > Incidental Mutation

Incidental Mutation 'R8496:Ctse'

658253

Institutional Source

Beutler Lab

Gene Symbol

Ctse

Ensembl Gene

ENSMUSG00000004552

Gene Name

cathepsin E

Synonyms

A430072O03Rik, CE, C920004C08Rik, CatE

MMRRC Submission

067938-MU

Accession Numbers

Essential gene?

Non essential (E-score: 0.000) question?

Stock #

R8496 (G1)

Quality Score

225.009

Status

Not validated

Chromosome

Chromosomal Location

131566052-131603245 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

T to A at 131592118 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Isoleucine to Asparagine at position 148 (I148N)

Ref Sequence

ENSEMBL: ENSMUSP00000073072 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000073350] [ENSMUST00000112411]

AlphaFold

P70269

Predicted Effect

probably damaging
Transcript: ENSMUST00000073350
AA Change: I148N

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)

SMART Domains

Protein: ENSMUSP00000073072
Gene: ENSMUSG00000004552
AA Change: I148N

Domain	Start	End	E-Value	Type
signal peptide	1	18	N/A	INTRINSIC
Pfam:A1_Propeptide	22	50	7e-14	PFAM
Pfam:Asp	78	395	2.1e-129	PFAM
Pfam:TAXi_N	79	236	1.3e-11	PFAM

Predicted Effect

probably damaging
Transcript: ENSMUST00000112411
AA Change: I148N

PolyPhen 2 Score 0.997 (Sensitivity: 0.41; Specificity: 0.98)

SMART Domains

Protein: ENSMUSP00000108030
Gene: ENSMUSG00000004552
AA Change: I148N

Domain	Start	End	E-Value	Type
signal peptide	1	18	N/A	INTRINSIC
Pfam:A1_Propeptide	22	50	2.7e-12	PFAM
Pfam:Asp	78	315	2e-99	PFAM
Pfam:TAXi_N	79	236	6.1e-14	PFAM
Pfam:Asp	310	362	6.8e-17	PFAM

Coding Region Coverage

1x: 100.0%
3x: 100.0%
10x: 99.7%
20x: 99.0%

Validation Efficiency

MGI Phenotype

FUNCTION: This gene encodes a member of the peptidase A1 family of aspartate proteases and preproprotein that is proteolytically processed to generate a mature protein product. The encoded protein may be involved in antigen processing and the maturation of secretory proteins. Elevated expression of this gene has been observed in neurodegeneration. Homozygous knockout mice for this gene exhibit lysosomal storage disorder, impaired autophagy, mitochondrial abnormalities, dermatitis, and reduced weight gain in an obesity model. [provided by RefSeq, Aug 2015]
PHENOTYPE: Mice homozygous for a targeted mutation are viable and fertile, but develop skin lesions on the face, ears, neck and dorsal skin which are similar to those seen in human atopic dermatitis. [provided by MGI curators]

Allele List at MGI

Other mutations in this stock

Total: 47 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
A430033K04Rik	A	G	5: 138,645,120 (GRCm39)	E335G	probably benign	Het
Afp	C	T	5: 90,639,572 (GRCm39)	S34F	probably damaging	Het
Ano6	T	A	15: 95,847,807 (GRCm39)	I639N	probably damaging	Het
Atp13a1	T	G	8: 70,250,618 (GRCm39)	V411G	probably damaging	Het
Cadm2	A	T	16: 66,461,309 (GRCm39)	C383S	probably damaging	Het
Capn2	T	C	1: 182,304,840 (GRCm39)	I556V	probably benign	Het
Cd34	A	G	1: 194,642,089 (GRCm39)	E322G	probably benign	Het
Cel	T	C	2: 28,446,200 (GRCm39)	D557G	probably benign	Het
Cemip	T	C	7: 83,600,634 (GRCm39)	I996V	probably benign	Het
Clca3a1	A	T	3: 144,453,182 (GRCm39)	*514R	probably null	Het
Cry2	C	G	2: 92,257,284 (GRCm39)	R95P	probably damaging	Het
Cyp4f13	G	C	17: 33,143,833 (GRCm39)	P497R	probably damaging	Het
Dsn1	C	T	2: 156,839,640 (GRCm39)	V254M	probably benign	Het
Fcgbpl1	A	G	7: 27,843,377 (GRCm39)	D755G	possibly damaging	Het
Gm4847	T	A	1: 166,469,761 (GRCm39)	H104L	possibly damaging	Het
Gpr88	T	C	3: 116,046,117 (GRCm39)	T65A	possibly damaging	Het
Gtse1	A	G	15: 85,746,283 (GRCm39)	D33G	probably damaging	Het
Ints6	A	G	14: 62,943,325 (GRCm39)	Y455H	probably benign	Het
Kctd1	A	T	18: 15,107,228 (GRCm39)	C150S	probably damaging	Het
Kctd11	T	G	11: 69,770,877 (GRCm39)	T54P	probably damaging	Het
Kif1b	C	A	4: 149,277,068 (GRCm39)	G56*	probably null	Het
Kifap3	T	A	1: 163,656,866 (GRCm39)		probably null	Het
Naip5	G	T	13: 100,349,247 (GRCm39)	H1360Q	probably benign	Het
Ncapd2	T	C	6: 125,147,127 (GRCm39)	E1198G	probably damaging	Het
Nova1	T	A	12: 46,760,325 (GRCm39)	K90*	probably null	Het
Odc1	T	A	12: 17,598,396 (GRCm39)	L179H	probably damaging	Het
Or10w1	T	A	19: 13,632,388 (GRCm39)	H193Q	probably damaging	Het
Or1ad8	T	C	11: 50,897,877 (GRCm39)	V26A	probably benign	Het
Or1s2	A	G	19: 13,758,384 (GRCm39)	N136S	probably benign	Het
Palm	C	T	10: 79,642,485 (GRCm39)	T6I	probably benign	Het
Parp10	T	A	15: 76,117,749 (GRCm39)	D879V	probably damaging	Het
Phf2	A	G	13: 48,971,181 (GRCm39)	V497A	unknown	Het
Pparg	A	G	6: 115,440,112 (GRCm39)	I199V	probably benign	Het
Ppm1b	T	A	17: 85,301,660 (GRCm39)	I180N	probably damaging	Het
Prdx5	A	T	19: 6,885,542 (GRCm39)	C37*	probably null	Het
Ptprz1	A	T	6: 22,972,797 (GRCm39)	T236S	probably damaging	Het
Rab5b	G	A	10: 128,518,776 (GRCm39)	Q119*	probably null	Het
Rdh19	T	A	10: 127,695,469 (GRCm39)	W228R	probably damaging	Het
Schip1	G	T	3: 68,401,946 (GRCm39)	G36C	probably damaging	Het
Secisbp2	T	C	13: 51,819,383 (GRCm39)	V321A	probably damaging	Het
Slc6a5	T	A	7: 49,585,960 (GRCm39)	V426D	probably damaging	Het
Syne1	T	A	10: 5,178,896 (GRCm39)	E4526V	probably damaging	Het
Syne1	T	C	10: 5,268,441 (GRCm39)	K2083E	probably damaging	Het
Tecta	T	A	9: 42,241,547 (GRCm39)	I2143F	probably benign	Het
Tfap4	T	C	16: 4,369,170 (GRCm39)	D90G	probably damaging	Het
Ttll12	T	C	15: 83,462,010 (GRCm39)	Y569C	probably damaging	Het
Zfp326	T	G	5: 106,036,451 (GRCm39)	S121A	probably damaging	Het

Other mutations in Ctse

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL02151:Ctse	APN	1	131,600,273 (GRCm39)	missense	probably benign	0.00
IGL02492:Ctse	APN	1	131,595,972 (GRCm39)	missense	probably damaging	1.00
R0057:Ctse	UTSW	1	131,591,109 (GRCm39)	missense	probably damaging	1.00
R0057:Ctse	UTSW	1	131,591,109 (GRCm39)	missense	probably damaging	1.00
R0690:Ctse	UTSW	1	131,602,516 (GRCm39)	splice site	probably benign
R2198:Ctse	UTSW	1	131,600,185 (GRCm39)	nonsense	probably null
R4190:Ctse	UTSW	1	131,590,479 (GRCm39)	missense	probably benign	0.02
R4668:Ctse	UTSW	1	131,590,487 (GRCm39)	missense	probably damaging	1.00
R4971:Ctse	UTSW	1	131,592,130 (GRCm39)	missense	probably damaging	1.00
R5070:Ctse	UTSW	1	131,595,917 (GRCm39)	missense	probably damaging	1.00
R5499:Ctse	UTSW	1	131,600,251 (GRCm39)	nonsense	probably null
R5705:Ctse	UTSW	1	131,592,112 (GRCm39)	missense	possibly damaging	0.82
R7207:Ctse	UTSW	1	131,592,112 (GRCm39)	missense	possibly damaging	0.82
R7828:Ctse	UTSW	1	131,590,491 (GRCm39)	missense	probably damaging	1.00
R8157:Ctse	UTSW	1	131,600,249 (GRCm39)	missense	probably damaging	1.00
R8237:Ctse	UTSW	1	131,590,467 (GRCm39)	missense	probably benign	0.01
R8270:Ctse	UTSW	1	131,595,877 (GRCm39)	missense	probably damaging	1.00
R9229:Ctse	UTSW	1	131,595,862 (GRCm39)	missense	probably damaging	1.00
R9349:Ctse	UTSW	1	131,592,111 (GRCm39)	missense	probably benign	0.00
X0067:Ctse	UTSW	1	131,598,510 (GRCm39)	missense	probably damaging	1.00
Z1177:Ctse	UTSW	1	131,600,182 (GRCm39)	critical splice acceptor site	probably null

Predicted Primers

PCR Primer
(F):5'- ATCTTCAACCTAGTGTGGGGAG -3'
(R):5'- CACTGCTCTCTAGGTTCAGC -3'

Sequencing Primer
(F):5'- AGCAGAGGGGAGCCACTC -3'
(R):5'- CACCGGGCTATCTCAGGTAGAAC -3'

Posted On

2021-01-18