Incidental Mutation 'R0240:Wdr13'
ID65900
Institutional Source Beutler Lab
Gene Symbol Wdr13
Ensembl Gene ENSMUSG00000031166
Gene NameWD repeat domain 13
Synonyms1700060B08Rik, DXHXS7467e, mMg21, 5730411P10Rik
MMRRC Submission 038478-MU
Accession Numbers
Is this an essential gene? Possibly non essential (E-score: 0.333) question?
Stock #R0240 (G1)
Quality Score225
Status Not validated
ChromosomeX
Chromosomal Location8123301-8132892 bp(-) (GRCm38)
Type of Mutationmissense
DNA Base Change (assembly) T to G at 8128045 bp
ZygosityHeterozygous
Amino Acid Change Aspartic acid to Alanine at position 242 (D242A)
Ref Sequence ENSEMBL: ENSMUSP00000138468 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000033506] [ENSMUST00000115623] [ENSMUST00000127062] [ENSMUST00000130832] [ENSMUST00000133292] [ENSMUST00000153839]
Predicted Effect possibly damaging
Transcript: ENSMUST00000033506
AA Change: D334A

PolyPhen 2 Score 0.805 (Sensitivity: 0.84; Specificity: 0.93)
SMART Domains Protein: ENSMUSP00000033506
Gene: ENSMUSG00000031166
AA Change: D334A

DomainStartEndE-ValueType
low complexity region 50 67 N/A INTRINSIC
WD40 160 201 6.16e0 SMART
WD40 206 245 7.85e-7 SMART
WD40 248 289 4.42e1 SMART
low complexity region 291 305 N/A INTRINSIC
low complexity region 372 383 N/A INTRINSIC
WD40 394 437 1.97e2 SMART
WD40 442 481 2.19e-5 SMART
Predicted Effect possibly damaging
Transcript: ENSMUST00000115623
AA Change: D334A

PolyPhen 2 Score 0.805 (Sensitivity: 0.84; Specificity: 0.93)
SMART Domains Protein: ENSMUSP00000111286
Gene: ENSMUSG00000031166
AA Change: D334A

DomainStartEndE-ValueType
low complexity region 50 67 N/A INTRINSIC
WD40 160 201 6.16e0 SMART
WD40 206 245 7.85e-7 SMART
WD40 248 289 4.42e1 SMART
low complexity region 291 305 N/A INTRINSIC
low complexity region 372 383 N/A INTRINSIC
WD40 394 437 1.97e2 SMART
WD40 442 481 2.19e-5 SMART
Predicted Effect probably benign
Transcript: ENSMUST00000127062
Predicted Effect noncoding transcript
Transcript: ENSMUST00000130050
Predicted Effect probably damaging
Transcript: ENSMUST00000130832
AA Change: D242A

PolyPhen 2 Score 0.963 (Sensitivity: 0.78; Specificity: 0.95)
SMART Domains Protein: ENSMUSP00000138468
Gene: ENSMUSG00000031166
AA Change: D242A

DomainStartEndE-ValueType
WD40 68 109 6.16e0 SMART
WD40 114 153 7.85e-7 SMART
WD40 156 197 4.42e1 SMART
low complexity region 199 213 N/A INTRINSIC
low complexity region 280 291 N/A INTRINSIC
WD40 302 345 1.97e2 SMART
WD40 350 389 2.19e-5 SMART
Predicted Effect noncoding transcript
Transcript: ENSMUST00000131929
Predicted Effect probably benign
Transcript: ENSMUST00000133292
Predicted Effect noncoding transcript
Transcript: ENSMUST00000148135
Predicted Effect noncoding transcript
Transcript: ENSMUST00000149257
Predicted Effect probably benign
Transcript: ENSMUST00000153839
SMART Domains Protein: ENSMUSP00000120395
Gene: ENSMUSG00000031166

DomainStartEndE-ValueType
low complexity region 50 67 N/A INTRINSIC
Blast:WD40 160 201 2e-23 BLAST
SCOP:d1jmxb_ 165 220 5e-5 SMART
Meta Mutation Damage Score 0.7374 question?
Coding Region Coverage
  • 1x: 98.7%
  • 3x: 97.3%
  • 10x: 91.2%
  • 20x: 69.9%
Validation Efficiency
MGI Phenotype FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes a member of the WD repeat protein family. WD repeats are minimally conserved regions of approximately 40 amino acids typically bracketed by Gly-His and Trp-Asp (GH-WD), which may facilitate formation of heterotrimeric or multiprotein complexes. Members of this family are involved in a variety of cellular processes, including cell cycle progression, signal transduction, apoptosis, and gene regulation. A similar protein in mouse is thought to be a negative regulator of the pancreatic beta cell proliferation. Mice lacking this gene exhibit increased pancreatic islet mass and higher serum insulin levels, and are mildly obese. [provided by RefSeq, Nov 2016]
PHENOTYPE: Mice homozygous for a knock-out allele exhibit increased pancreas beta cell proliferation, hyperinsulinemia and mild obesity. [provided by MGI curators]
Allele List at MGI
Other mutations in this stock
Total: 83 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Acsf3 T C 8: 122,780,181 L71P probably damaging Het
Adamts2 A T 11: 50,775,374 D399V probably damaging Het
Adck2 T A 6: 39,583,818 V380E probably benign Het
Ankrd27 T A 7: 35,619,439 L585Q probably damaging Het
Atp7a T A X: 106,109,841 N1117K probably damaging Het
Cacna1d T A 14: 30,096,969 M1210L probably benign Het
Cotl1 C T 8: 119,840,324 W26* probably null Het
Csmd3 T C 15: 47,629,239 T3000A probably benign Het
Ddhd2 A T 8: 25,739,590 probably null Het
Dnah8 T C 17: 30,765,679 I3117T probably damaging Het
Dnm3 G T 1: 162,353,625 Q162K probably benign Het
Dpy19l2 G T 9: 24,658,580 A359D probably damaging Het
Eif4g3 A G 4: 138,170,562 K1025R probably damaging Het
Eml2 C A 7: 19,184,872 Y82* probably null Het
Eml6 A G 11: 29,792,367 V1057A possibly damaging Het
Espl1 T C 15: 102,312,541 S911P probably benign Het
Flrt1 A T 19: 7,097,110 probably benign Het
G3bp1 G A 11: 55,492,028 G139D probably damaging Het
Galc A T 12: 98,252,034 H186Q probably damaging Het
Ganab A G 19: 8,912,813 D702G possibly damaging Het
Hdac10 T C 15: 89,125,882 E291G possibly damaging Het
Hectd3 T G 4: 117,002,613 V749G probably damaging Het
Kcnh1 T A 1: 192,505,340 I703N probably benign Het
Kcnma1 G A 14: 23,494,579 T505I probably damaging Het
Kctd11 A G 11: 69,879,814 C133R probably damaging Het
Lama3 A T 18: 12,539,823 probably null Het
Lamb3 T C 1: 193,335,027 L842P probably damaging Het
Lipk G A 19: 34,046,810 R336H probably benign Het
Lrrc24 T A 15: 76,723,209 D58V probably damaging Het
Milr1 G A 11: 106,754,896 W88* probably null Het
Mmp10 A G 9: 7,506,543 D340G probably damaging Het
Mybpc1 T A 10: 88,555,738 Y285F possibly damaging Het
Ncoa3 A G 2: 166,054,400 T408A probably benign Het
Nefm T A 14: 68,121,134 K484* probably null Het
Nfasc A G 1: 132,601,983 S814P probably damaging Het
Nlrp4a T C 7: 26,462,516 V863A probably benign Het
Nos1 C T 5: 117,867,883 P223S probably benign Het
Olfr1213 A T 2: 88,973,396 L165Q probably damaging Het
Olfr1440 A T 19: 12,394,963 E233D probably benign Het
Olfr155 T A 4: 43,854,512 S68T probably damaging Het
Olfr228 A G 2: 86,483,386 S119P possibly damaging Het
Otog C A 7: 46,264,032 probably null Het
Pacs1 A T 19: 5,156,374 I261N possibly damaging Het
Pbx1 G A 1: 168,203,482 T189I possibly damaging Het
Pcnx T C 12: 81,947,018 I908T possibly damaging Het
Pdxdc1 A T 16: 13,879,445 W124R probably damaging Het
Phex C A X: 157,186,218 D587Y probably damaging Het
Plcb3 A T 19: 6,962,995 D435E probably benign Het
Plce1 A C 19: 38,728,886 K1373T probably damaging Het
Prkcd G A 14: 30,602,088 A311V probably damaging Het
Ptpn3 A T 4: 57,232,374 S421T probably benign Het
Ptprs T C 17: 56,436,087 probably null Het
Qrich1 A G 9: 108,534,134 D286G probably damaging Het
Rcc1 C A 4: 132,332,915 G393V probably damaging Het
Reln T C 5: 22,106,045 N290S probably benign Het
Rhpn1 C T 15: 75,714,122 T628I probably benign Het
Rnf224 T C 2: 25,236,207 T45A probably damaging Het
Rpa1 A G 11: 75,328,687 V137A probably benign Het
Rps6ka1 C A 4: 133,848,531 Q693H probably benign Het
Scn2a G T 2: 65,735,774 V1381F probably benign Het
Scp2 T A 4: 108,098,078 H112L probably benign Het
Sdk1 T C 5: 141,998,747 W696R probably damaging Het
Slc26a7 C A 4: 14,532,651 V408F probably damaging Het
Slc28a2 T A 2: 122,454,527 I332N probably benign Het
Slc45a4 T A 15: 73,581,906 E674D probably benign Het
Smpd3 T C 8: 106,265,156 E255G probably damaging Het
Snx29 C T 16: 11,660,553 R658W probably damaging Het
Sppl2a A T 2: 126,920,336 M275K probably benign Het
Stac T C 9: 111,635,021 N59S probably damaging Het
Stk25 A T 1: 93,627,060 L131Q probably damaging Het
Thbs1 C A 2: 118,114,393 N229K probably damaging Het
Tmx2 A T 2: 84,675,842 H89Q probably damaging Het
Trappc3l A T 10: 34,098,932 R119* probably null Het
Ublcp1 G T 11: 44,458,277 Y243* probably null Het
Usp24 C A 4: 106,414,404 C2158* probably null Het
Usp34 A T 11: 23,433,206 K2088N probably damaging Het
Vmn1r53 G C 6: 90,223,943 S133C probably damaging Het
Vmn2r52 A G 7: 10,159,400 V604A probably damaging Het
Vmn2r93 A G 17: 18,304,799 K240E probably benign Het
Wwp1 C T 4: 19,641,734 probably null Het
Zan G A 5: 137,398,362 H4311Y unknown Het
Zc3h12c C A 9: 52,144,083 R123L possibly damaging Het
Zfp318 C T 17: 46,396,813 P266S probably benign Het
Other mutations in Wdr13
AlleleSourceChrCoordTypePredicted EffectPPH Score
R0240:Wdr13 UTSW X 8128045 missense probably damaging 0.96
Z1088:Wdr13 UTSW X 8125622 missense probably damaging 1.00
Z1088:Wdr13 UTSW X 8125624 missense probably damaging 1.00
Predicted Primers
Posted On2013-08-19