Incidental Mutation 'R8534:Pip'
ID 659150
Institutional Source Beutler Lab
Gene Symbol Pip
Ensembl Gene ENSMUSG00000058499
Gene Name prolactin induced protein
Synonyms GCDFP-15, mSMGP, gross cystic disease fluid protein 15
MMRRC Submission 068503-MU
Accession Numbers
Essential gene? Probably non essential (E-score: 0.056) question?
Stock # R8534 (G1)
Quality Score 225.009
Status Validated
Chromosome 6
Chromosomal Location 41824483-41828999 bp(+) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) T to C at 41828421 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Valine to Alanine at position 85 (V85A)
Ref Sequence ENSEMBL: ENSMUSP00000074818 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000075351] [ENSMUST00000120605] [ENSMUST00000203244]
AlphaFold P02816
Predicted Effect probably benign
Transcript: ENSMUST00000075351
AA Change: V85A

PolyPhen 2 Score 0.287 (Sensitivity: 0.91; Specificity: 0.88)
SMART Domains Protein: ENSMUSP00000074818
Gene: ENSMUSG00000058499
AA Change: V85A

DomainStartEndE-ValueType
Pfam:SVA 1 126 5.9e-56 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000120605
SMART Domains Protein: ENSMUSP00000113417
Gene: ENSMUSG00000014104

DomainStartEndE-ValueType
Pfam:SVA 1 85 1.4e-35 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000203244
AA Change: V85A

PolyPhen 2 Score 0.139 (Sensitivity: 0.92; Specificity: 0.86)
SMART Domains Protein: ENSMUSP00000144995
Gene: ENSMUSG00000058499
AA Change: V85A

DomainStartEndE-ValueType
Pfam:SVA 1 107 3.2e-42 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000204575
Meta Mutation Damage Score 0.0846 question?
Coding Region Coverage
  • 1x: 100.0%
  • 3x: 100.0%
  • 10x: 99.8%
  • 20x: 99.2%
Validation Efficiency 100% (57/57)
MGI Phenotype PHENOTYPE: Mice homozygous for a knock-out allele exhibit enlarged submandibular lymph nodes, enlarged medulla of the thymus and abnormal prostate gland dorsolateral lobe morphology. [provided by MGI curators]
Allele List at MGI
Other mutations in this stock
Total: 57 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
4921504E06Rik A C 2: 19,545,153 (GRCm39) L100R probably damaging Het
6820408C15Rik A G 2: 152,283,182 (GRCm39) D282G probably damaging Het
Abcb11 G T 2: 69,154,190 (GRCm39) N125K possibly damaging Het
Acbd7 A T 2: 3,341,750 (GRCm39) D71V probably damaging Het
Adgrb1 A T 15: 74,415,357 (GRCm39) T646S probably damaging Het
Adgrv1 A G 13: 81,534,887 (GRCm39) Y5793H probably benign Het
Agmo A G 12: 37,302,538 (GRCm39) D125G probably damaging Het
Ahrr A G 13: 74,368,799 (GRCm39) S125P probably damaging Het
B020011L13Rik C A 1: 117,729,034 (GRCm39) H180Q probably benign Het
Cbfa2t3 T C 8: 123,365,653 (GRCm39) D219G probably damaging Het
Ccdc187 A G 2: 26,165,577 (GRCm39) S860P possibly damaging Het
Ceacam5 A T 7: 17,484,671 (GRCm39) Q471L probably benign Het
Cyp2c54 A C 19: 40,036,030 (GRCm39) D293E probably damaging Het
Dnah1 G T 14: 31,023,805 (GRCm39) N962K probably benign Het
Dst C T 1: 34,229,388 (GRCm39) T2002I probably benign Het
Elavl1 A T 8: 4,339,864 (GRCm39) N239K probably benign Het
Elmod3 A G 6: 72,543,667 (GRCm39) F375L probably benign Het
G6pc2 T A 2: 69,050,469 (GRCm39) N31K probably benign Het
Ggnbp2 C T 11: 84,728,815 (GRCm39) probably null Het
Gm6569 G T 15: 73,711,673 (GRCm39) probably benign Het
Insig1 C T 5: 28,280,116 (GRCm39) S236L probably damaging Het
Itih4 A T 14: 30,622,979 (GRCm39) N882I probably benign Het
Kmt5a C A 5: 124,598,635 (GRCm39) D309E probably benign Het
Kndc1 C A 7: 139,503,669 (GRCm39) T991N probably benign Het
Lingo1 T A 9: 56,528,353 (GRCm39) T79S probably benign Het
Myh4 A T 11: 67,134,335 (GRCm39) E330V probably benign Het
Nlrx1 A G 9: 44,174,070 (GRCm39) V377A probably benign Het
Npy5r C A 8: 67,134,688 (GRCm39) G35V probably benign Het
Or5b102 T A 19: 13,041,432 (GRCm39) I219N probably damaging Het
Or7g33 C T 9: 19,448,605 (GRCm39) G207D possibly damaging Het
Pabpn1l T C 8: 123,349,358 (GRCm39) T20A probably benign Het
Pcf11 A G 7: 92,302,432 (GRCm39) V1226A probably benign Het
Per2 G A 1: 91,351,659 (GRCm39) T949M probably benign Het
Phc1 G A 6: 122,315,539 (GRCm39) probably benign Het
Pias2 A G 18: 77,185,083 (GRCm39) I55V possibly damaging Het
Pik3r2 A T 8: 71,227,312 (GRCm39) S104T probably benign Het
Pms2 T C 5: 143,860,445 (GRCm39) V86A probably benign Het
Potefam1 G A 2: 111,058,380 (GRCm39) P138S possibly damaging Het
Rab44 A G 17: 29,363,547 (GRCm39) probably null Het
Rrbp1 A G 2: 143,830,095 (GRCm39) S691P probably damaging Het
Ruvbl2 A T 7: 45,079,118 (GRCm39) probably null Het
Setbp1 T C 18: 78,826,542 (GRCm39) D1357G possibly damaging Het
Slc12a6 T A 2: 112,174,312 (GRCm39) I476N probably damaging Het
Slc1a1 C T 19: 28,882,746 (GRCm39) P337S probably damaging Het
Slc35b3 T A 13: 39,128,566 (GRCm39) T174S probably benign Het
Slc4a4 A T 5: 89,283,581 (GRCm39) I467F probably damaging Het
Slc50a1 G A 3: 89,177,710 (GRCm39) probably null Het
Spink14 G A 18: 44,164,079 (GRCm39) probably null Het
Spmap2l T A 5: 77,207,325 (GRCm39) I361N probably damaging Het
Tmem59 T C 4: 107,043,082 (GRCm39) probably null Het
Tnr G A 1: 159,746,585 (GRCm39) E1235K probably benign Het
Trpm6 A T 19: 18,869,459 (GRCm39) R2015S probably benign Het
Tsnaxip1 A G 8: 106,565,370 (GRCm39) E132G probably damaging Het
Vps54 A G 11: 21,227,706 (GRCm39) N93S probably benign Het
Wdr17 T G 8: 55,101,265 (GRCm39) I994L probably benign Het
Zfat G T 15: 68,037,696 (GRCm39) H926Q probably damaging Het
Zfp2 C T 11: 50,791,627 (GRCm39) E139K possibly damaging Het
Other mutations in Pip
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL02893:Pip APN 6 41,824,596 (GRCm39) missense probably damaging 0.99
R0312:Pip UTSW 6 41,826,798 (GRCm39) missense possibly damaging 0.82
R0539:Pip UTSW 6 41,826,819 (GRCm39) nonsense probably null
R1432:Pip UTSW 6 41,826,852 (GRCm39) missense probably benign 0.41
R3122:Pip UTSW 6 41,828,819 (GRCm39) missense probably damaging 0.99
R3617:Pip UTSW 6 41,828,871 (GRCm39) missense probably benign 0.23
R6431:Pip UTSW 6 41,828,391 (GRCm39) missense possibly damaging 0.58
R7180:Pip UTSW 6 41,824,565 (GRCm39) missense probably damaging 1.00
R8236:Pip UTSW 6 41,824,596 (GRCm39) missense probably damaging 0.99
R9077:Pip UTSW 6 41,828,388 (GRCm39) missense probably damaging 1.00
R9400:Pip UTSW 6 41,828,782 (GRCm39) missense probably benign 0.27
X0054:Pip UTSW 6 41,828,472 (GRCm39) missense probably damaging 0.99
Predicted Primers PCR Primer
(F):5'- GGACGTCTGGGCTAAGTATG -3'
(R):5'- CCCAGAAATGCTCCTCCTATGC -3'

Sequencing Primer
(F):5'- TCTAGGAAAATTAGCATGCAGAATG -3'
(R):5'- ATGCTTCCTTTCCAACTATACACTG -3'
Posted On 2021-01-18