Mutagenetix > Incidental Mutation

Incidental Mutation 'R8460:6030458C11Rik'

660767

Institutional Source

Beutler Lab

Gene Symbol

6030458C11Rik

Ensembl Gene

ENSMUSG00000022195

Gene Name

RIKEN cDNA 6030458C11 gene

Synonyms

MMRRC Submission

067905-MU

Accession Numbers

Essential gene?

Possibly non essential (E-score: 0.308) question?

Stock #

R8460 (G1)

Quality Score

78.0075

Status

Validated

Chromosome

Chromosomal Location

12808263-12824735 bp(-) (GRCm39)

Type of Mutation

intron

DNA Base Change (assembly)

T to C at 12818545 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Ref Sequence

ENSEMBL: ENSMUSP00000154147 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000057256] [ENSMUST00000227299] [ENSMUST00000228177]

AlphaFold

no structure available at present

Predicted Effect

probably benign
Transcript: ENSMUST00000057256

SMART Domains

Protein: ENSMUSP00000055656
Gene: ENSMUSG00000022195

Domain	Start	End	E-Value	Type
Pfam:UPF0489	19	256	7.2e-57	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000227299

Predicted Effect

probably benign
Transcript: ENSMUST00000228177

Coding Region Coverage

1x: 100.0%
3x: 99.9%
10x: 99.7%
20x: 99.0%

Validation Efficiency

100% (52/52)

Allele List at MGI

Other mutations in this stock

Total: 52 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
1700067P10Rik	G	T	17: 48,400,849 (GRCm39)	E45*	probably null	Het
Abcb11	T	C	2: 69,154,381 (GRCm39)	M62V	possibly damaging	Het
Adgrf5	C	A	17: 43,750,699 (GRCm39)		probably benign	Het
Arhgap23	T	A	11: 97,343,197 (GRCm39)	V493D	probably damaging	Het
Atg9b	T	C	5: 24,591,966 (GRCm39)	K678E	probably damaging	Het
Catsperg2	T	C	7: 29,404,744 (GRCm39)	D773G	possibly damaging	Het
Cd180	T	C	13: 102,839,354 (GRCm39)	L79P	probably damaging	Het
Celsr2	C	T	3: 108,304,093 (GRCm39)	S2350N	possibly damaging	Het
Cep85l	C	A	10: 53,225,313 (GRCm39)	R92L	probably benign	Het
Cyp21a1	T	C	17: 35,021,844 (GRCm39)	D241G	probably benign	Het
Dock2	C	A	11: 34,180,825 (GRCm39)		probably null	Het
Fam163a	A	G	1: 155,955,712 (GRCm39)	Y27H	probably damaging	Het
Gmnc	G	A	16: 26,779,204 (GRCm39)	L274F	probably benign	Het
Gpc2	A	T	5: 138,274,891 (GRCm39)	C283S	probably damaging	Het
Grm5	A	G	7: 87,252,249 (GRCm39)	I166M	probably damaging	Het
Ighv3-1	A	T	12: 113,928,056 (GRCm39)	L101*	probably null	Het
Impact	C	T	18: 13,109,564 (GRCm39)	S86L	probably benign	Het
Kif1b	C	T	4: 149,272,077 (GRCm39)	V1575I	possibly damaging	Het
Klhl6	A	G	16: 19,775,781 (GRCm39)	V259A	probably damaging	Het
Krt81	G	T	15: 101,361,493 (GRCm39)	A29E	probably damaging	Het
Ldah	A	G	12: 8,318,548 (GRCm39)	N219S	probably benign	Het
Map3k12	C	T	15: 102,410,032 (GRCm39)	R581Q	probably damaging	Het
Marveld3	T	C	8: 110,681,040 (GRCm39)	D285G	probably benign	Het
Mcpt2	A	G	14: 56,281,201 (GRCm39)	D135G	possibly damaging	Het
Megf6	T	A	4: 154,350,634 (GRCm39)	C1048*	probably null	Het
Megf9	A	T	4: 70,374,208 (GRCm39)	V276D	probably damaging	Het
Nfya	T	C	17: 48,698,974 (GRCm39)	H273R	possibly damaging	Het
Olah	T	A	2: 3,362,762 (GRCm39)	Q21H	probably damaging	Het
Or10s1	T	C	9: 39,986,353 (GRCm39)	L254P	probably damaging	Het
Or51t4	T	A	7: 102,598,531 (GRCm39)	C286*	probably null	Het
Or7g21	T	C	9: 19,032,988 (GRCm39)	S243P	probably damaging	Het
Or8b47	A	T	9: 38,427,926 (GRCm39)		probably benign	Het
Or8k23	T	G	2: 86,186,198 (GRCm39)	H176P	probably damaging	Het
Or9s23	T	A	1: 92,501,268 (GRCm39)	M125K	probably damaging	Het
Pcdhgb6	T	A	18: 37,877,278 (GRCm39)	L662Q	possibly damaging	Het
Pou4f3	T	C	18: 42,529,053 (GRCm39)	M332T	probably damaging	Het
Pramel19	C	T	4: 101,798,424 (GRCm39)	P132S	probably benign	Het
Pramel58	T	A	5: 94,831,790 (GRCm39)	C266S	probably benign	Het
Prg4	G	A	1: 150,331,692 (GRCm39)	S327L	possibly damaging	Het
Rdh5	C	T	10: 128,754,136 (GRCm39)	R99H	probably benign	Het
Setd1a	T	C	7: 127,383,292 (GRCm39)	F263L	unknown	Het
Setd2	A	G	9: 110,423,338 (GRCm39)	N353S		Het
Sh3gl1	T	C	17: 56,326,321 (GRCm39)	N109S	probably benign	Het
Sidt1	A	T	16: 44,107,705 (GRCm39)	Y188*	probably null	Het
Slc25a13	A	T	6: 6,073,513 (GRCm39)	N448K	probably damaging	Het
Slc44a5	G	A	3: 153,975,667 (GRCm39)	V693M	probably benign	Het
Smad7	T	C	18: 75,503,968 (GRCm39)	S206P	probably damaging	Het
Snx33	T	A	9: 56,833,476 (GRCm39)	I198F	possibly damaging	Het
Vps13d	A	T	4: 144,897,009 (GRCm39)		probably benign	Het
Vps33b	T	C	7: 79,937,617 (GRCm39)	V455A	probably benign	Het
Zdbf2	CGCTCCGTGCCCCCCGCGCGCCCCGTGCCTCCCACGCGCCCCGTGCCTCCCGCAGGCTCCGTGCCCCCCGCG	CGCTCCGTGCCCCCCGCG	1: 63,348,729 (GRCm39)		probably benign	Het
Zfp26	A	T	9: 20,348,373 (GRCm39)	H730Q	probably damaging	Het

Other mutations in 6030458C11Rik

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01412:6030458C11Rik	APN	15	12,815,958 (GRCm39)	nonsense	probably null
IGL02366:6030458C11Rik	APN	15	12,810,859 (GRCm39)	missense	probably benign	0.40
IGL02660:6030458C11Rik	APN	15	12,810,853 (GRCm39)	missense	probably damaging	1.00
R1869:6030458C11Rik	UTSW	15	12,817,993 (GRCm39)	missense	probably damaging	1.00
R5919:6030458C11Rik	UTSW	15	12,823,754 (GRCm39)	missense	probably damaging	1.00
R6853:6030458C11Rik	UTSW	15	12,818,031 (GRCm39)	missense	probably benign
R6875:6030458C11Rik	UTSW	15	12,812,154 (GRCm39)	missense	probably damaging	0.98
R8013:6030458C11Rik	UTSW	15	12,824,615 (GRCm39)	missense	probably benign	0.15
R8014:6030458C11Rik	UTSW	15	12,824,615 (GRCm39)	missense	probably benign	0.15

Predicted Primers

PCR Primer
(F):5'- GCTGGTCTTCAGGTACAAACAG -3'
(R):5'- GTGTTCCCCGATCTCTTGAG -3'

Sequencing Primer
(F):5'- TGTACTTGTAACCCTGGACCGAAG -3'
(R):5'- GTTCCCCGATCTCTTGAGTCCTC -3'

Posted On

2021-02-03