Incidental Mutation 'R0206:1300017J02Rik'
ID66384
Institutional Source Beutler Lab
Gene Symbol 1300017J02Rik
Ensembl Gene ENSMUSG00000033688
Gene NameRIKEN cDNA 1300017J02 gene
SynonymsmICA
MMRRC Submission 038459-MU
Accession Numbers
Is this an essential gene? Possibly non essential (E-score: 0.429) question?
Stock #R0206 (G1)
Quality Score85
Status Not validated
Chromosome9
Chromosomal Location103250521-103305082 bp(-) (GRCm38)
Type of Mutationmissense
DNA Base Change (assembly) A to G at 103282662 bp
ZygosityHeterozygous
Amino Acid Change Cysteine to Arginine at position 5 (C5R)
Ref Sequence ENSEMBL: ENSMUSP00000116504 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000035163] [ENSMUST00000123530] [ENSMUST00000142540]
Predicted Effect possibly damaging
Transcript: ENSMUST00000035163
AA Change: C17R

PolyPhen 2 Score 0.838 (Sensitivity: 0.84; Specificity: 0.93)
SMART Domains Protein: ENSMUSP00000035163
Gene: ENSMUSG00000033688
AA Change: C17R

DomainStartEndE-ValueType
signal peptide 1 19 N/A INTRINSIC
TR_FER 25 352 5.48e-163 SMART
TR_FER 355 697 3.26e-179 SMART
Predicted Effect unknown
Transcript: ENSMUST00000123530
AA Change: C17R
SMART Domains Protein: ENSMUSP00000115867
Gene: ENSMUSG00000033688
AA Change: C17R

DomainStartEndE-ValueType
signal peptide 1 19 N/A INTRINSIC
TR_FER 25 351 3.67e-164 SMART
TR_FER 352 619 5.89e-104 SMART
Predicted Effect probably damaging
Transcript: ENSMUST00000142540
AA Change: C5R

PolyPhen 2 Score 0.998 (Sensitivity: 0.27; Specificity: 0.99)
Predicted Effect noncoding transcript
Transcript: ENSMUST00000150524
Meta Mutation Damage Score 0.6467 question?
Coding Region Coverage
  • 1x: 95.8%
  • 3x: 87.0%
  • 10x: 38.5%
  • 20x: 5.3%
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 22 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
A530064D06Rik G A 17: 48,163,318 T165I probably benign Het
Adam26a A C 8: 43,570,418 F12V possibly damaging Het
Aldh1l1 T C 6: 90,569,866 F384L possibly damaging Het
Cit A T 5: 115,994,030 N1782Y possibly damaging Het
Cmya5 A G 13: 93,095,557 S1008P probably damaging Het
Dnah11 A C 12: 118,043,774 N2156K probably damaging Het
Gm20441 A G 10: 75,772,885 M1T probably null Het
Inpp5k T C 11: 75,631,143 I15T probably benign Het
Loxhd1 T A 18: 77,404,866 F1334L possibly damaging Het
Me3 A T 7: 89,849,660 T483S probably benign Het
Med1 A G 11: 98,155,689 probably benign Het
Mxra8 T A 4: 155,842,596 I329N probably damaging Het
Mybphl T C 3: 108,375,415 V207A probably damaging Het
Myom1 T C 17: 71,037,297 S266P probably damaging Het
Olfr1032 T C 2: 86,008,292 I172T probably damaging Het
Olfr308 T C 7: 86,321,646 Y102C probably benign Het
Olfr412 A T 11: 74,365,142 I158F probably benign Het
Olfr690 A T 7: 105,329,883 M103K possibly damaging Het
Prex2 T A 1: 11,285,144 D1556E probably damaging Het
Slc35d1 T C 4: 103,208,154 T177A probably damaging Het
Vmn2r6 T C 3: 64,539,912 T578A probably benign Het
Zkscan1 T A 5: 138,101,186 C391S probably damaging Het
Other mutations in 1300017J02Rik
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01371:1300017J02Rik APN 9 103254776 missense possibly damaging 0.48
IGL02370:1300017J02Rik APN 9 103263074 missense probably benign 0.27
IGL02899:1300017J02Rik APN 9 103277574 missense probably damaging 1.00
R0206:1300017J02Rik UTSW 9 103282662 missense probably damaging 1.00
R0831:1300017J02Rik UTSW 9 103269779 missense possibly damaging 0.50
R0849:1300017J02Rik UTSW 9 103263057 missense possibly damaging 0.94
R1225:1300017J02Rik UTSW 9 103254839 splice site probably benign
R2061:1300017J02Rik UTSW 9 103268314 missense probably benign 0.01
R2176:1300017J02Rik UTSW 9 103259367 splice site probably benign
R4915:1300017J02Rik UTSW 9 103251855 nonsense probably null
R4917:1300017J02Rik UTSW 9 103251855 nonsense probably null
R5020:1300017J02Rik UTSW 9 103282502 missense probably benign 0.02
R5033:1300017J02Rik UTSW 9 103279414 missense probably benign 0.36
R5087:1300017J02Rik UTSW 9 103266221 missense probably damaging 0.98
R5174:1300017J02Rik UTSW 9 103282556 splice site probably null
R6283:1300017J02Rik UTSW 9 103282635 nonsense probably null
R7092:1300017J02Rik UTSW 9 103281043 missense possibly damaging 0.55
R7175:1300017J02Rik UTSW 9 103251789 critical splice donor site probably null
R7347:1300017J02Rik UTSW 9 103282646 missense possibly damaging 0.67
R7380:1300017J02Rik UTSW 9 103279481 nonsense probably null
R7400:1300017J02Rik UTSW 9 103250662 missense probably benign 0.25
R7460:1300017J02Rik UTSW 9 103254648 missense probably benign 0.00
R7993:1300017J02Rik UTSW 9 103263133 missense probably benign
R8056:1300017J02Rik UTSW 9 103266224 missense probably damaging 1.00
R8686:1300017J02Rik UTSW 9 103259428 missense probably benign 0.00
Predicted Primers
Posted On2013-08-19