Incidental Mutation 'R8765:Vmn2r101'
ID |
667855 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Vmn2r101
|
Ensembl Gene |
ENSMUSG00000094892 |
Gene Name |
vomeronasal 2, receptor 101 |
Synonyms |
EG627576 |
MMRRC Submission |
068599-MU
|
Accession Numbers |
|
Essential gene? |
Probably non essential
(E-score: 0.124)
|
Stock # |
R8765 (G1)
|
Quality Score |
225.009 |
Status
|
Validated
|
Chromosome |
17 |
Chromosomal Location |
19797493-19832579 bp(+) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
T to A
at 19809245 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Tryptophan to Arginine
at position 125
(W125R)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000131583
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000171914]
|
AlphaFold |
E9PZS9 |
Predicted Effect |
probably damaging
Transcript: ENSMUST00000171914
AA Change: W125R
PolyPhen 2
Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
|
SMART Domains |
Protein: ENSMUSP00000131583 Gene: ENSMUSG00000094892 AA Change: W125R
Domain | Start | End | E-Value | Type |
signal peptide
|
1 |
19 |
N/A |
INTRINSIC |
Pfam:ANF_receptor
|
82 |
466 |
1.6e-36 |
PFAM |
Pfam:NCD3G
|
509 |
562 |
6.4e-22 |
PFAM |
Pfam:7tm_3
|
595 |
830 |
1.4e-51 |
PFAM |
|
Meta Mutation Damage Score |
0.6467 |
Coding Region Coverage |
- 1x: 100.0%
- 3x: 99.9%
- 10x: 99.8%
- 20x: 99.3%
|
Validation Efficiency |
100% (71/71) |
Allele List at MGI |
|
Other mutations in this stock |
Total: 72 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
4932414N04Rik |
G |
A |
2: 68,566,956 (GRCm39) |
D452N |
possibly damaging |
Het |
Actr1a |
G |
T |
19: 46,372,787 (GRCm39) |
|
probably benign |
Het |
Alox15 |
A |
G |
11: 70,240,819 (GRCm39) |
V187A |
probably benign |
Het |
Alpk1 |
A |
T |
3: 127,466,118 (GRCm39) |
N1129K |
probably damaging |
Het |
Angptl1 |
A |
G |
1: 156,684,727 (GRCm39) |
N299D |
probably benign |
Het |
Ank2 |
T |
C |
3: 126,850,731 (GRCm39) |
T128A |
possibly damaging |
Het |
Armh4 |
C |
T |
14: 49,920,100 (GRCm39) |
R743K |
probably damaging |
Het |
Arsj |
G |
A |
3: 126,232,781 (GRCm39) |
R509K |
probably benign |
Het |
Atp6v0a2 |
G |
A |
5: 124,793,534 (GRCm39) |
M630I |
probably damaging |
Het |
BC107364 |
T |
C |
3: 96,341,751 (GRCm39) |
H122R |
unknown |
Het |
Bdh2 |
T |
C |
3: 134,996,841 (GRCm39) |
M112T |
probably benign |
Het |
C1qtnf3 |
G |
A |
15: 10,952,843 (GRCm39) |
|
probably null |
Het |
Cables1 |
T |
C |
18: 12,056,422 (GRCm39) |
L326P |
probably benign |
Het |
Cacna1c |
C |
A |
6: 118,580,844 (GRCm39) |
A1769S |
|
Het |
Cacna2d2 |
T |
C |
9: 107,394,358 (GRCm39) |
L567P |
probably damaging |
Het |
Cacnb4 |
C |
T |
2: 52,327,001 (GRCm39) |
R399H |
probably damaging |
Het |
Cacng4 |
A |
C |
11: 107,625,976 (GRCm39) |
I205S |
probably damaging |
Het |
Ciz1 |
A |
G |
2: 32,260,895 (GRCm39) |
K269E |
probably damaging |
Het |
Csf1 |
A |
G |
3: 107,663,991 (GRCm39) |
V35A |
probably benign |
Het |
Csmd1 |
G |
T |
8: 16,760,627 (GRCm39) |
Y169* |
probably null |
Het |
Ctnna1 |
T |
A |
18: 35,384,293 (GRCm39) |
M756K |
probably damaging |
Het |
Dnah7b |
T |
A |
1: 46,392,159 (GRCm39) |
L3840Q |
possibly damaging |
Het |
Fabp9 |
T |
C |
3: 10,258,813 (GRCm39) |
*143W |
probably null |
Het |
Fh1 |
C |
T |
1: 175,435,378 (GRCm39) |
|
probably benign |
Het |
Fmo2 |
T |
C |
1: 162,707,966 (GRCm39) |
T390A |
probably benign |
Het |
Fsip1 |
G |
T |
2: 118,082,154 (GRCm39) |
D93E |
possibly damaging |
Het |
Golga5 |
A |
G |
12: 102,445,963 (GRCm39) |
D406G |
probably benign |
Het |
Gucy2d |
C |
A |
7: 98,108,347 (GRCm39) |
A760E |
probably benign |
Het |
Hax1 |
T |
C |
3: 89,904,780 (GRCm39) |
I141V |
probably benign |
Het |
Hid1 |
T |
A |
11: 115,239,786 (GRCm39) |
|
probably null |
Het |
Hmcn1 |
C |
T |
1: 150,556,413 (GRCm39) |
V2458I |
probably damaging |
Het |
Igkv4-72 |
A |
G |
6: 69,203,894 (GRCm39) |
V99A |
probably benign |
Het |
Igkv5-39 |
G |
A |
6: 69,877,915 (GRCm39) |
S16L |
probably benign |
Het |
Ints4 |
T |
A |
7: 97,151,016 (GRCm39) |
D294E |
possibly damaging |
Het |
Lcn11 |
A |
G |
2: 25,668,139 (GRCm39) |
Y99C |
probably damaging |
Het |
Lrrc8b |
G |
A |
5: 105,629,133 (GRCm39) |
R493H |
probably benign |
Het |
Mon1b |
A |
T |
8: 114,362,881 (GRCm39) |
D43V |
possibly damaging |
Het |
Mrpl9 |
G |
A |
3: 94,355,129 (GRCm39) |
V234I |
possibly damaging |
Het |
Nek10 |
A |
T |
14: 14,999,104 (GRCm38) |
E1034D |
probably damaging |
Het |
Nfxl1 |
T |
C |
5: 72,686,443 (GRCm39) |
H586R |
probably benign |
Het |
Nit2 |
T |
A |
16: 56,979,832 (GRCm39) |
D211V |
probably benign |
Het |
Nle1 |
G |
A |
11: 82,793,882 (GRCm39) |
R385C |
probably damaging |
Het |
Or10ak12 |
T |
C |
4: 118,666,159 (GRCm39) |
T301A |
probably benign |
Het |
Or1i2 |
C |
T |
10: 78,448,429 (GRCm39) |
M15I |
probably benign |
Het |
Or2a25 |
T |
C |
6: 42,889,102 (GRCm39) |
V215A |
probably benign |
Het |
Or2ab1 |
G |
T |
11: 58,488,785 (GRCm39) |
V182F |
possibly damaging |
Het |
Or6ae1 |
T |
C |
7: 139,742,467 (GRCm39) |
H132R |
probably benign |
Het |
Or6c213 |
A |
G |
10: 129,574,511 (GRCm39) |
Y92H |
probably damaging |
Het |
Pcdh10 |
T |
C |
3: 45,333,923 (GRCm39) |
I79T |
probably damaging |
Het |
Peg10 |
A |
G |
6: 4,754,492 (GRCm39) |
D91G |
unknown |
Het |
Plec |
C |
T |
15: 76,066,045 (GRCm39) |
A1342T |
unknown |
Het |
Ppp2r3d |
A |
G |
9: 124,439,649 (GRCm38) |
V68A |
|
Het |
Pramel46 |
T |
C |
5: 95,419,447 (GRCm39) |
M1V |
probably null |
Het |
Psd3 |
A |
T |
8: 68,416,093 (GRCm39) |
D315E |
possibly damaging |
Het |
Rack1 |
A |
G |
11: 48,694,286 (GRCm39) |
N162S |
probably benign |
Het |
Slc12a8 |
C |
A |
16: 33,338,731 (GRCm39) |
H11Q |
possibly damaging |
Het |
Slc44a5 |
A |
T |
3: 153,968,561 (GRCm39) |
D584V |
probably damaging |
Het |
Spata18 |
T |
C |
5: 73,825,992 (GRCm39) |
S100P |
|
Het |
Stap2 |
G |
T |
17: 56,310,145 (GRCm39) |
S53R |
probably damaging |
Het |
Timeless |
T |
C |
10: 128,080,412 (GRCm39) |
|
probably null |
Het |
Tlk1 |
A |
T |
2: 70,582,581 (GRCm39) |
S183T |
probably benign |
Het |
Tpp2 |
T |
A |
1: 44,011,849 (GRCm39) |
|
probably null |
Het |
Ttn |
A |
T |
2: 76,654,663 (GRCm39) |
|
probably benign |
Het |
Uri1 |
A |
G |
7: 37,696,145 (GRCm39) |
V40A |
probably benign |
Het |
Vmn1r15 |
T |
C |
6: 57,235,585 (GRCm39) |
V151A |
probably benign |
Het |
Vmn1r198 |
A |
C |
13: 22,539,269 (GRCm39) |
I252L |
probably damaging |
Het |
Wdr89 |
A |
G |
12: 75,679,688 (GRCm39) |
S189P |
probably damaging |
Het |
Zfp1006 |
T |
C |
8: 129,948,070 (GRCm39) |
D49G |
probably benign |
Het |
Zfp873 |
T |
A |
10: 81,896,072 (GRCm39) |
C268S |
probably damaging |
Het |
Zfp932 |
T |
A |
5: 110,154,827 (GRCm39) |
D8E |
probably benign |
Het |
Zfyve16 |
T |
C |
13: 92,658,055 (GRCm39) |
R619G |
probably benign |
Het |
Zswim2 |
A |
T |
2: 83,771,431 (GRCm39) |
I31N |
probably damaging |
Het |
|
Other mutations in Vmn2r101 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL01121:Vmn2r101
|
APN |
17 |
19,809,936 (GRCm39) |
missense |
probably damaging |
0.99 |
IGL02125:Vmn2r101
|
APN |
17 |
19,809,963 (GRCm39) |
missense |
possibly damaging |
0.95 |
IGL02300:Vmn2r101
|
APN |
17 |
19,832,199 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02682:Vmn2r101
|
APN |
17 |
19,832,507 (GRCm39) |
missense |
possibly damaging |
0.82 |
IGL02825:Vmn2r101
|
APN |
17 |
19,810,132 (GRCm39) |
missense |
probably benign |
0.00 |
IGL02862:Vmn2r101
|
APN |
17 |
19,831,867 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02943:Vmn2r101
|
APN |
17 |
19,831,666 (GRCm39) |
missense |
probably damaging |
0.99 |
R0371:Vmn2r101
|
UTSW |
17 |
19,810,394 (GRCm39) |
missense |
probably benign |
0.07 |
R0462:Vmn2r101
|
UTSW |
17 |
19,810,431 (GRCm39) |
missense |
probably benign |
0.04 |
R0492:Vmn2r101
|
UTSW |
17 |
19,809,245 (GRCm39) |
missense |
probably damaging |
1.00 |
R0654:Vmn2r101
|
UTSW |
17 |
19,810,373 (GRCm39) |
missense |
probably benign |
0.01 |
R1120:Vmn2r101
|
UTSW |
17 |
19,797,723 (GRCm39) |
splice site |
probably benign |
|
R1323:Vmn2r101
|
UTSW |
17 |
19,832,313 (GRCm39) |
missense |
probably damaging |
1.00 |
R1323:Vmn2r101
|
UTSW |
17 |
19,832,313 (GRCm39) |
missense |
probably damaging |
1.00 |
R1676:Vmn2r101
|
UTSW |
17 |
19,832,184 (GRCm39) |
missense |
probably benign |
0.00 |
R2023:Vmn2r101
|
UTSW |
17 |
19,810,368 (GRCm39) |
nonsense |
probably null |
|
R2149:Vmn2r101
|
UTSW |
17 |
19,809,225 (GRCm39) |
missense |
probably benign |
0.00 |
R2350:Vmn2r101
|
UTSW |
17 |
19,810,045 (GRCm39) |
missense |
probably benign |
0.01 |
R2760:Vmn2r101
|
UTSW |
17 |
19,809,901 (GRCm39) |
missense |
probably benign |
0.14 |
R3085:Vmn2r101
|
UTSW |
17 |
19,809,077 (GRCm39) |
splice site |
probably null |
|
R3086:Vmn2r101
|
UTSW |
17 |
19,809,077 (GRCm39) |
splice site |
probably null |
|
R3719:Vmn2r101
|
UTSW |
17 |
19,809,811 (GRCm39) |
missense |
possibly damaging |
0.50 |
R3771:Vmn2r101
|
UTSW |
17 |
19,809,919 (GRCm39) |
missense |
probably benign |
|
R3773:Vmn2r101
|
UTSW |
17 |
19,809,919 (GRCm39) |
missense |
probably benign |
|
R4225:Vmn2r101
|
UTSW |
17 |
19,831,951 (GRCm39) |
missense |
probably damaging |
1.00 |
R4248:Vmn2r101
|
UTSW |
17 |
19,809,376 (GRCm39) |
missense |
probably damaging |
1.00 |
R4290:Vmn2r101
|
UTSW |
17 |
19,832,303 (GRCm39) |
missense |
probably damaging |
1.00 |
R4291:Vmn2r101
|
UTSW |
17 |
19,832,303 (GRCm39) |
missense |
probably damaging |
1.00 |
R4293:Vmn2r101
|
UTSW |
17 |
19,832,303 (GRCm39) |
missense |
probably damaging |
1.00 |
R4307:Vmn2r101
|
UTSW |
17 |
19,810,423 (GRCm39) |
missense |
probably damaging |
1.00 |
R4721:Vmn2r101
|
UTSW |
17 |
19,832,287 (GRCm39) |
missense |
probably damaging |
0.99 |
R4829:Vmn2r101
|
UTSW |
17 |
19,832,229 (GRCm39) |
missense |
probably benign |
0.03 |
R5022:Vmn2r101
|
UTSW |
17 |
19,831,649 (GRCm39) |
critical splice acceptor site |
probably null |
|
R5110:Vmn2r101
|
UTSW |
17 |
19,831,897 (GRCm39) |
missense |
possibly damaging |
0.92 |
R5244:Vmn2r101
|
UTSW |
17 |
19,831,788 (GRCm39) |
missense |
probably damaging |
1.00 |
R5397:Vmn2r101
|
UTSW |
17 |
19,809,104 (GRCm39) |
missense |
probably damaging |
1.00 |
R5875:Vmn2r101
|
UTSW |
17 |
19,809,092 (GRCm39) |
missense |
probably damaging |
0.99 |
R5944:Vmn2r101
|
UTSW |
17 |
19,809,769 (GRCm39) |
missense |
probably benign |
0.00 |
R6216:Vmn2r101
|
UTSW |
17 |
19,811,267 (GRCm39) |
missense |
probably benign |
0.00 |
R6334:Vmn2r101
|
UTSW |
17 |
19,810,112 (GRCm39) |
missense |
possibly damaging |
0.83 |
R6512:Vmn2r101
|
UTSW |
17 |
19,809,146 (GRCm39) |
missense |
probably damaging |
1.00 |
R6607:Vmn2r101
|
UTSW |
17 |
19,832,296 (GRCm39) |
missense |
probably damaging |
1.00 |
R6965:Vmn2r101
|
UTSW |
17 |
19,811,284 (GRCm39) |
missense |
probably benign |
0.00 |
R7101:Vmn2r101
|
UTSW |
17 |
19,809,350 (GRCm39) |
missense |
probably null |
0.14 |
R7183:Vmn2r101
|
UTSW |
17 |
19,832,440 (GRCm39) |
missense |
probably damaging |
1.00 |
R7344:Vmn2r101
|
UTSW |
17 |
19,832,059 (GRCm39) |
missense |
probably benign |
0.38 |
R7375:Vmn2r101
|
UTSW |
17 |
19,831,652 (GRCm39) |
missense |
probably damaging |
1.00 |
R7574:Vmn2r101
|
UTSW |
17 |
19,831,899 (GRCm39) |
missense |
possibly damaging |
0.91 |
R7575:Vmn2r101
|
UTSW |
17 |
19,831,654 (GRCm39) |
missense |
probably benign |
0.01 |
R7592:Vmn2r101
|
UTSW |
17 |
19,811,443 (GRCm39) |
splice site |
probably null |
|
R7626:Vmn2r101
|
UTSW |
17 |
19,832,192 (GRCm39) |
nonsense |
probably null |
|
R7715:Vmn2r101
|
UTSW |
17 |
19,832,177 (GRCm39) |
missense |
probably damaging |
1.00 |
R7730:Vmn2r101
|
UTSW |
17 |
19,831,950 (GRCm39) |
missense |
possibly damaging |
0.81 |
R8078:Vmn2r101
|
UTSW |
17 |
19,810,507 (GRCm39) |
missense |
probably benign |
0.07 |
R8228:Vmn2r101
|
UTSW |
17 |
19,811,284 (GRCm39) |
missense |
probably benign |
0.00 |
R8283:Vmn2r101
|
UTSW |
17 |
19,832,253 (GRCm39) |
missense |
probably damaging |
1.00 |
R8712:Vmn2r101
|
UTSW |
17 |
19,811,397 (GRCm39) |
missense |
probably benign |
0.24 |
R9091:Vmn2r101
|
UTSW |
17 |
19,810,244 (GRCm39) |
missense |
probably benign |
|
R9092:Vmn2r101
|
UTSW |
17 |
19,809,807 (GRCm39) |
missense |
probably benign |
0.07 |
R9113:Vmn2r101
|
UTSW |
17 |
19,811,288 (GRCm39) |
missense |
possibly damaging |
0.56 |
R9158:Vmn2r101
|
UTSW |
17 |
19,809,161 (GRCm39) |
missense |
probably benign |
0.00 |
R9168:Vmn2r101
|
UTSW |
17 |
19,809,138 (GRCm39) |
missense |
probably damaging |
1.00 |
R9235:Vmn2r101
|
UTSW |
17 |
19,810,238 (GRCm39) |
missense |
probably damaging |
0.99 |
R9270:Vmn2r101
|
UTSW |
17 |
19,810,244 (GRCm39) |
missense |
probably benign |
|
R9290:Vmn2r101
|
UTSW |
17 |
19,811,395 (GRCm39) |
missense |
probably benign |
0.05 |
R9296:Vmn2r101
|
UTSW |
17 |
19,810,047 (GRCm39) |
missense |
probably damaging |
0.98 |
R9602:Vmn2r101
|
UTSW |
17 |
19,831,780 (GRCm39) |
nonsense |
probably null |
|
R9706:Vmn2r101
|
UTSW |
17 |
19,809,925 (GRCm39) |
missense |
probably damaging |
1.00 |
Z1088:Vmn2r101
|
UTSW |
17 |
19,809,237 (GRCm39) |
missense |
possibly damaging |
0.78 |
|
Predicted Primers |
PCR Primer
(F):5'- TGTATGGTAAAGTTGATCATCCCC -3'
(R):5'- GCTCTAATATGAACAAGGAGAACTG -3'
Sequencing Primer
(F):5'- GGTAAAGTTGATCATCCCCTTTTG -3'
(R):5'- ATATGAACAAGGAGAACTGACTTTC -3'
|
Posted On |
2021-03-08 |