Incidental Mutation 'R8478:Csrnp3'
ID 668194
Institutional Source Beutler Lab
Gene Symbol Csrnp3
Ensembl Gene ENSMUSG00000044647
Gene Name cysteine-serine-rich nuclear protein 3
Synonyms mbu1, CSRNP-3, A330102K23Rik
MMRRC Submission 067922-MU
Accession Numbers
Essential gene? Probably non essential (E-score: 0.210) question?
Stock # R8478 (G1)
Quality Score 225.009
Status Validated
Chromosome 2
Chromosomal Location 65676111-65861890 bp(+) (GRCm39)
Type of Mutation splice site (4 bp from exon)
DNA Base Change (assembly) A to T at 65708400 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change
Ref Sequence ENSEMBL: ENSMUSP00000117533 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000053910] [ENSMUST00000112397] [ENSMUST00000122912]
AlphaFold P59055
Predicted Effect probably null
Transcript: ENSMUST00000053910
SMART Domains Protein: ENSMUSP00000055719
Gene: ENSMUSG00000044647

DomainStartEndE-ValueType
low complexity region 31 52 N/A INTRINSIC
low complexity region 123 140 N/A INTRINSIC
low complexity region 161 176 N/A INTRINSIC
Blast:CXC 221 268 3e-15 BLAST
low complexity region 342 359 N/A INTRINSIC
low complexity region 377 400 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000112397
SMART Domains Protein: ENSMUSP00000135151
Gene: ENSMUSG00000044647

DomainStartEndE-ValueType
low complexity region 31 52 N/A INTRINSIC
Predicted Effect probably null
Transcript: ENSMUST00000122912
SMART Domains Protein: ENSMUSP00000117533
Gene: ENSMUSG00000044647

DomainStartEndE-ValueType
low complexity region 31 52 N/A INTRINSIC
Pfam:CSRNP_N 70 291 5e-107 PFAM
low complexity region 342 359 N/A INTRINSIC
low complexity region 377 400 N/A INTRINSIC
Coding Region Coverage
  • 1x: 100.0%
  • 3x: 100.0%
  • 10x: 99.8%
  • 20x: 99.5%
Validation Efficiency 100% (66/66)
MGI Phenotype PHENOTYPE: Mice homozygous for a knock-out allele exhibit normal development, hematopoiesis and T cell function. [provided by MGI curators]
Allele List at MGI
Other mutations in this stock
Total: 66 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Actl11 A T 9: 107,805,844 (GRCm39) I56F possibly damaging Het
Adgrl3 G T 5: 81,942,348 (GRCm39) R1357L possibly damaging Het
Alpk1 T A 3: 127,522,961 (GRCm39) D27V probably damaging Het
Als2 T C 1: 59,225,175 (GRCm39) E986G probably damaging Het
Ankle2 T A 5: 110,400,818 (GRCm39) L717Q possibly damaging Het
Arl8b A G 6: 108,760,285 (GRCm39) T24A possibly damaging Het
Atp2a1 A G 7: 126,047,502 (GRCm39) I718T probably damaging Het
Atp6v0e2 T A 6: 48,517,031 (GRCm39) N70K probably benign Het
Bcl11a A G 11: 24,115,086 (GRCm39) S810G probably damaging Het
Bcl2a1d T G 9: 88,605,488 (GRCm39) *173S probably null Het
Bltp1 A T 3: 37,087,426 (GRCm39) D511V possibly damaging Het
Cacna1g A G 11: 94,317,278 (GRCm39) Y1494H probably damaging Het
Ccdc7a T C 8: 129,487,850 (GRCm39) K186E possibly damaging Het
Cfap43 T C 19: 47,764,515 (GRCm39) I817V probably benign Het
Chd5 C T 4: 152,441,147 (GRCm39) R196* probably null Het
Chsy1 C T 7: 65,820,748 (GRCm39) H328Y probably benign Het
Clcn3 A T 8: 61,372,522 (GRCm39) S713T probably benign Het
Dnhd1 A G 7: 105,332,001 (GRCm39) N86S probably benign Het
Epha3 T C 16: 63,593,444 (GRCm39) T215A probably damaging Het
Fgf1 T C 18: 38,987,944 (GRCm39) probably null Het
Fosl1 T C 19: 5,504,947 (GRCm39) S145P probably damaging Het
Frem3 T A 8: 81,338,187 (GRCm39) V160E probably damaging Het
Galk2 A T 2: 125,771,505 (GRCm39) K177* probably null Het
Gria1 T C 11: 57,200,668 (GRCm39) Y782H probably damaging Het
Gria4 C T 9: 4,793,882 (GRCm39) E59K probably damaging Het
Ighv1-11 A G 12: 114,575,919 (GRCm39) Y99H possibly damaging Het
Insm2 A T 12: 55,647,330 (GRCm39) Y358F probably damaging Het
Marveld3 C T 8: 110,688,600 (GRCm39) G47D probably damaging Het
Mthfd1l A G 10: 4,098,064 (GRCm39) D967G probably damaging Het
Nav2 G T 7: 49,111,733 (GRCm39) M746I probably damaging Het
Niban1 C A 1: 151,512,263 (GRCm39) T55K possibly damaging Het
Nmnat1 A G 4: 149,557,841 (GRCm39) I67T possibly damaging Het
Nub1 G T 5: 24,906,422 (GRCm39) R316L probably benign Het
Nxn A G 11: 76,164,869 (GRCm39) V214A probably damaging Het
Or52n5 C A 7: 104,588,477 (GRCm39) S248Y probably benign Het
Pelp1 A T 11: 70,285,146 (GRCm39) D907E unknown Het
Pik3c2a A T 7: 116,017,584 (GRCm39) S58T probably damaging Het
Pik3ca A G 3: 32,505,997 (GRCm39) N703S probably benign Het
Polr3c G A 3: 96,624,066 (GRCm39) probably benign Het
Pon1 C T 6: 5,185,318 (GRCm39) G61R probably damaging Het
Pou2f1 A T 1: 165,759,287 (GRCm39) M1K probably null Het
Prkdc T A 16: 15,466,788 (GRCm39) C90S probably benign Het
Prokr1 A G 6: 87,558,330 (GRCm39) Y352H probably benign Het
Rhod C T 19: 4,476,719 (GRCm39) R134H probably damaging Het
Rufy3 C T 5: 88,762,895 (GRCm39) R110W probably damaging Het
Sema4c A T 1: 36,590,871 (GRCm39) M460K probably benign Het
Slc46a3 T C 5: 147,815,963 (GRCm39) S455G probably benign Het
Smyd1 A T 6: 71,193,811 (GRCm39) H371Q probably damaging Het
Steap1 A G 5: 5,786,432 (GRCm39) M335T probably benign Het
Suox A G 10: 128,506,921 (GRCm39) V369A probably damaging Het
Thbs2 T C 17: 14,900,666 (GRCm39) I514V probably benign Het
Tie1 A T 4: 118,341,979 (GRCm39) probably null Het
Tmem131l T C 3: 83,805,769 (GRCm39) E1558G probably damaging Het
Tpcn1 G T 5: 120,698,386 (GRCm39) H45Q probably benign Het
Ush1c A G 7: 45,870,857 (GRCm39) S327P probably damaging Het
Ush2a G A 1: 188,175,429 (GRCm39) V1176M possibly damaging Het
Utrn A G 10: 12,524,892 (GRCm39) M2197T probably benign Het
Vmn1r50 G T 6: 90,085,071 (GRCm39) C272F probably benign Het
Vmn2r10 A T 5: 109,143,636 (GRCm39) N771K probably damaging Het
Vmn2r2 A T 3: 64,024,257 (GRCm39) F691I possibly damaging Het
Vmn2r53 T C 7: 12,340,281 (GRCm39) Q64R probably benign Het
Vmn2r95 G T 17: 18,672,544 (GRCm39) L760F probably damaging Het
Wdr97 T C 15: 76,247,629 (GRCm39) probably null Het
Xdh C A 17: 74,213,053 (GRCm39) E863D probably benign Het
Ykt6 A G 11: 5,912,407 (GRCm39) Y120C possibly damaging Het
Zranb2 A G 3: 157,251,745 (GRCm39) *321W probably null Het
Other mutations in Csrnp3
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01676:Csrnp3 APN 2 65,779,336 (GRCm39) missense probably damaging 0.99
IGL02427:Csrnp3 APN 2 65,708,380 (GRCm39) utr 5 prime probably benign
IGL02558:Csrnp3 APN 2 65,852,573 (GRCm39) missense probably damaging 1.00
IGL02605:Csrnp3 APN 2 65,853,153 (GRCm39) missense probably damaging 1.00
Uncle UTSW 2 65,852,615 (GRCm39) missense probably benign 0.34
IGL02984:Csrnp3 UTSW 2 65,852,553 (GRCm39) missense probably benign 0.37
R0417:Csrnp3 UTSW 2 65,849,887 (GRCm39) missense probably benign 0.43
R0709:Csrnp3 UTSW 2 65,852,907 (GRCm39) missense probably damaging 0.99
R1340:Csrnp3 UTSW 2 65,832,740 (GRCm39) missense probably damaging 1.00
R1712:Csrnp3 UTSW 2 65,832,826 (GRCm39) missense probably damaging 1.00
R1960:Csrnp3 UTSW 2 65,853,363 (GRCm39) missense probably null 1.00
R1997:Csrnp3 UTSW 2 65,779,446 (GRCm39) missense probably damaging 1.00
R4839:Csrnp3 UTSW 2 65,852,375 (GRCm39) nonsense probably null
R5233:Csrnp3 UTSW 2 65,852,684 (GRCm39) missense possibly damaging 0.95
R5340:Csrnp3 UTSW 2 65,852,781 (GRCm39) missense probably benign 0.00
R6157:Csrnp3 UTSW 2 65,779,363 (GRCm39) missense probably damaging 1.00
R6781:Csrnp3 UTSW 2 65,852,615 (GRCm39) missense probably benign 0.34
R6974:Csrnp3 UTSW 2 65,779,408 (GRCm39) missense possibly damaging 0.59
R7120:Csrnp3 UTSW 2 65,853,354 (GRCm39) missense probably damaging 1.00
R7293:Csrnp3 UTSW 2 65,779,344 (GRCm39) missense probably damaging 1.00
R8250:Csrnp3 UTSW 2 65,852,562 (GRCm39) missense probably damaging 0.99
R8899:Csrnp3 UTSW 2 65,852,987 (GRCm39) missense possibly damaging 0.71
R9396:Csrnp3 UTSW 2 65,832,841 (GRCm39) missense probably damaging 1.00
R9477:Csrnp3 UTSW 2 65,852,819 (GRCm39) missense probably benign 0.01
Predicted Primers PCR Primer
(F):5'- GAGTCCCATGGTTTCTCTACATG -3'
(R):5'- CTCTCAAGAATCCCAAAGATGTTTC -3'

Sequencing Primer
(F):5'- GTCCCATGGTTTCTCTACATGTAATG -3'
(R):5'- GCTCATATCTGAATACAGTTCCAGGG -3'
Posted On 2021-04-21