Mutagenetix > Incidental Mutation

Incidental Mutation 'R8701:Rnf220'

669050

Institutional Source

Beutler Lab

Gene Symbol

Rnf220

Ensembl Gene

ENSMUSG00000028677

Gene Name

ring finger protein 220

Synonyms

MMRRC Submission

Accession Numbers

Essential gene?

Probably essential (E-score: 0.843) question?

Stock #

R8701 (G1)

Quality Score

225.009

Status

Not validated

Chromosome

Chromosomal Location

117271463-117497052 bp(-) (GRCm38)

Type of Mutation

missense

DNA Base Change (assembly)

T to C at 117489993 bp (GRCm38)

Zygosity

Heterozygous

Amino Acid Change

Histidine to Arginine at position 74 (H74R)

Ref Sequence

ENSEMBL: ENSMUSP00000030439 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000030439]

AlphaFold

Q6PDX6

Predicted Effect

probably damaging
Transcript: ENSMUST00000030439
AA Change: H74R

PolyPhen 2 Score 0.986 (Sensitivity: 0.74; Specificity: 0.96)

SMART Domains

Protein: ENSMUSP00000030439
Gene: ENSMUSG00000028677
AA Change: H74R

Domain	Start	End	E-Value	Type
Pfam:RNF220	217	339	3.5e-38	PFAM
Pfam:RNF220	325	444	4.9e-51	PFAM
RING	514	552	1.62e-1	SMART

Coding Region Coverage

1x: 100.0%
3x: 99.9%
10x: 99.7%
20x: 98.8%

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 65 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
4931408C20Rik	A	T	1: 26,685,445	V218D	probably benign	Het
Abcc4	T	C	14: 118,599,373	I659V	probably benign	Het
Adamtsl4	T	A	3: 95,684,966	D24V	possibly damaging	Het
Agtr1b	A	T	3: 20,316,092	F117I	probably damaging	Het
Aldh3b2	A	G	19: 3,978,448	E116G	probably damaging	Het
Alox5	T	A	6: 116,413,826	I455F	possibly damaging	Het
Arnt	C	T	3: 95,493,765	S675F	possibly damaging	Het
C330027C09Rik	T	A	16: 49,007,141	Y456*	probably null	Het
Camkv	A	G	9: 107,948,041	T414A	possibly damaging	Het
Cd209c	C	T	8: 3,945,892	R6H	probably benign	Het
Cnr1	A	G	4: 33,944,739	I376V	probably benign	Het
Cyp2j12	T	A	4: 96,121,573	K183M	possibly damaging	Het
Dact3	G	T	7: 16,885,276	R232L	probably damaging	Het
Dlg5	G	A	14: 24,176,700	T378M	probably benign	Het
Dnah10	T	A	5: 124,726,847	D79E	probably benign	Het
Dsc1	A	T	18: 20,107,682	Y195*	probably null	Het
Elovl1	A	T	4: 118,430,510	M1L	probably benign	Het
Fam107a	A	G	14: 8,298,755	F124L	probably damaging	Het
Fam219a	A	G	4: 41,520,283	M155T	probably damaging	Het
Gm28308	C	G	6: 52,163,450		probably benign	Het
Gpr153	C	T	4: 152,279,101		probably benign	Het
Gtf2ird2	T	A	5: 134,216,235	I445N	probably damaging	Het
Gzmb	A	T	14: 56,260,360	V141E	probably benign	Het
Hmcn1	A	T	1: 150,755,257	M930K	probably benign	Het
Hunk	T	A	16: 90,386,610	F52Y	probably damaging	Het
Il18rap	A	G	1: 40,539,341	E304G	probably benign	Het
Klk14	A	G	7: 43,694,142	S133G	possibly damaging	Het
Man2b1	T	C	8: 85,095,153	S695P	probably damaging	Het
Mccc1	A	T	3: 35,995,784	D86E	probably benign	Het
Mcu	T	A	10: 59,467,653	I121F	probably damaging	Het
Mlxipl	T	C	5: 135,107,191	F90S	possibly damaging	Het
Muc2	A	G	7: 141,695,607	D536G	probably damaging	Het
Naa11	T	C	5: 97,391,958	S114G	possibly damaging	Het
Ncaph	T	C	2: 127,106,138	K676E	probably benign	Het
Neurl2	C	T	2: 164,833,134	D103N	probably benign	Het
Nup210l	T	C	3: 90,122,814	M278T	probably benign	Het
Olfr1192-ps1	A	G	2: 88,652,487	I112V	possibly damaging	Het
Olfr550	A	T	7: 102,578,692	M66L	possibly damaging	Het
Olfr897-ps1	A	T	9: 38,309,438	L214F	unknown	Het
Olfr967	A	T	9: 39,750,914	H176L	probably damaging	Het
Olfr981	A	G	9: 40,022,519	N42S	probably damaging	Het
Pcdh20	A	T	14: 88,468,413	Y484N	possibly damaging	Het
Pkhd1l1	A	G	15: 44,574,683	Y3598C	probably damaging	Het
Plcg2	T	A	8: 117,581,677	L336Q	probably damaging	Het
Ppp1r8	T	C	4: 132,830,642	D207G	possibly damaging	Het
Prdm13	C	T	4: 21,678,615	C625Y	probably damaging	Het
Ptcd3	T	C	6: 71,885,511	D480G	possibly damaging	Het
Rbm39	T	A	2: 156,161,587	K291M	probably damaging	Het
Repin1	G	T	6: 48,597,345	E403*	probably null	Het
Sp6	A	T	11: 97,022,264	T268S	probably damaging	Het
Sphk2	A	T	7: 45,710,825	V585E	probably damaging	Het
Syne1	G	A	10: 5,205,026	Q5638*	probably null	Het
Tas1r3	C	T	4: 155,861,046	V573I	probably benign	Het
Tdrd1	T	C	19: 56,851,484	S659P	possibly damaging	Het
Tead4	T	A	6: 128,242,566	K237N	probably damaging	Het
Tex24	T	A	8: 27,345,124	C227S	probably benign	Het
Tom1	A	T	8: 75,052,168	T174S	probably benign	Het
Tpm3	C	T	3: 90,087,680	R168C	possibly damaging	Het
Trpv3	A	G	11: 73,278,936	E111G	possibly damaging	Het
Unc80	A	G	1: 66,638,032	D2040G	possibly damaging	Het
Usp47	A	G	7: 112,093,195	T955A	probably damaging	Het
Vmn2r11	G	A	5: 109,047,690	A590V	probably damaging	Het
Wisp2	G	T	2: 163,828,866	G98W	probably damaging	Het
Zfp112	A	G	7: 24,125,740	R382G	probably damaging	Het
Zfp606	T	A	7: 12,481,098	D84E	unknown	Het

Other mutations in Rnf220

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00940:Rnf220	APN	4	117307675	missense	probably benign	0.02
IGL01345:Rnf220	APN	4	117273270	nonsense	probably null
IGL02097:Rnf220	APN	4	117273327	missense	probably benign	0.00
IGL02245:Rnf220	APN	4	117299537	splice site	probably benign
IGL02366:Rnf220	APN	4	117489783	missense	probably benign
IGL02725:Rnf220	APN	4	117272379	splice site	probably benign
IGL02801:Rnf220	APN	4	117273251	missense	probably damaging	1.00
IGL02963:Rnf220	APN	4	117490192	missense	probably damaging	0.97
BB007:Rnf220	UTSW	4	117307590	missense	probably damaging	0.99
BB017:Rnf220	UTSW	4	117307590	missense	probably damaging	0.99
PIT4131001:Rnf220	UTSW	4	117277369	critical splice donor site	probably null
R0041:Rnf220	UTSW	4	117273284	missense	probably damaging	1.00
R0784:Rnf220	UTSW	4	117277998	splice site	probably benign
R1107:Rnf220	UTSW	4	117285390	missense	probably damaging	1.00
R1122:Rnf220	UTSW	4	117278080	missense	probably benign	0.01
R1231:Rnf220	UTSW	4	117489884	missense	probably damaging	0.98
R1708:Rnf220	UTSW	4	117489886	missense	probably benign	0.00
R1794:Rnf220	UTSW	4	117307568	missense	probably benign
R4488:Rnf220	UTSW	4	117489814	missense	probably damaging	1.00
R4710:Rnf220	UTSW	4	117289214	unclassified	probably benign
R4790:Rnf220	UTSW	4	117289055	missense	probably benign	0.45
R4923:Rnf220	UTSW	4	117489600	missense	possibly damaging	0.71
R5173:Rnf220	UTSW	4	117289274	start gained	probably benign
R5334:Rnf220	UTSW	4	117272351	missense	probably damaging	1.00
R5505:Rnf220	UTSW	4	117296091	intron	probably benign
R5849:Rnf220	UTSW	4	117277612	missense	possibly damaging	0.92
R7075:Rnf220	UTSW	4	117285882	missense	probably benign	0.28
R7349:Rnf220	UTSW	4	117277818	missense	probably damaging	0.99
R7478:Rnf220	UTSW	4	117296136	missense	possibly damaging	0.94
R7541:Rnf220	UTSW	4	117489930	missense	probably damaging	1.00
R7930:Rnf220	UTSW	4	117307590	missense	probably damaging	0.99
R8030:Rnf220	UTSW	4	117277828	missense	probably damaging	1.00
R8202:Rnf220	UTSW	4	117489873	missense	probably damaging	1.00
R9268:Rnf220	UTSW	4	117489636	missense	probably benign	0.09
R9452:Rnf220	UTSW	4	117296142	missense	probably benign	0.08

Predicted Primers

PCR Primer
(F):5'- CTCTTGGCTGGAGTAAAGGC -3'
(R):5'- GGCAGCCTTCAAGATGGAGAAC -3'

Sequencing Primer
(F):5'- GTAAAGGCAGACTGATAGCTCTCC -3'
(R):5'- AGATGGAGAACTCATCCTATCTTCC -3'

Posted On

2021-04-30