Incidental Mutation 'R8806:Vmn1r56'
ID672059
Institutional Source Beutler Lab
Gene Symbol Vmn1r56
Ensembl Gene ENSMUSG00000091874
Gene Namevomeronasal 1 receptor 56
SynonymsV3R3, V1rd3
Accession Numbers
Is this an essential gene? Probably non essential (E-score: 0.092) question?
Stock #R8806 (G1)
Quality Score225.009
Status Not validated
Chromosome7
Chromosomal Location5194916-5196747 bp(-) (GRCm38)
Type of Mutationmissense
DNA Base Change (assembly) T to C at 5195806 bp
ZygosityHeterozygous
Amino Acid Change Serine to Glycine at position 271 (S271G)
Ref Sequence ENSEMBL: ENSMUSP00000128821 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000169556]
Predicted Effect probably damaging
Transcript: ENSMUST00000169556
AA Change: S271G

PolyPhen 2 Score 0.999 (Sensitivity: 0.14; Specificity: 0.99)
SMART Domains Protein: ENSMUSP00000128821
Gene: ENSMUSG00000091874
AA Change: S271G

DomainStartEndE-ValueType
Pfam:TAS2R 1 289 1.1e-14 PFAM
Pfam:7tm_1 20 277 7.2e-6 PFAM
Pfam:V1R 31 287 2.2e-19 PFAM
Coding Region Coverage
  • 1x: 100.0%
  • 3x: 99.9%
  • 10x: 99.6%
  • 20x: 98.4%
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 65 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
1700022I11Rik A G 4: 42,971,261 D198G probably benign Het
Abca1 T C 4: 53,084,520 M586V probably benign Het
Adam6b G A 12: 113,491,798 R745H possibly damaging Het
Afg3l1 A G 8: 123,493,918 D462G probably damaging Het
Anapc1 T A 2: 128,622,413 Q1721L possibly damaging Het
Arhgap11a T C 2: 113,834,762 Y497C possibly damaging Het
Bcl7b T G 5: 135,179,970 S96A possibly damaging Het
Birc6 T C 17: 74,642,316 V3111A probably damaging Het
Cbx1 A G 11: 96,801,557 D90G possibly damaging Het
Ccdc105 A G 10: 78,752,472 V168A probably damaging Het
Cdkl3 T C 11: 52,032,468 F524S possibly damaging Het
Cops7b G A 1: 86,589,309 G44R probably damaging Het
D130043K22Rik A G 13: 24,899,635 S1028G probably benign Het
Decr1 T A 4: 15,945,351 M1L probably benign Het
Dmtn T C 14: 70,614,948 I167V probably benign Het
Dnah9 A G 11: 65,859,483 L3932P probably damaging Het
Ece1 T A 4: 137,945,141 I365N probably damaging Het
Exo5 T C 4: 120,922,405 T88A probably benign Het
Frem3 T C 8: 80,663,435 Y1772H probably benign Het
Gm11639 T A 11: 105,037,869 M4815K probably benign Het
Gm5160 A G 18: 14,424,874 N3D possibly damaging Het
Gm7138 T A 10: 77,776,883 D21V unknown Het
Gucy2e A G 11: 69,236,116 V177A probably benign Het
Islr C A 9: 58,156,973 G417V unknown Het
Kif13a A T 13: 46,761,337 M1458K possibly damaging Het
Mcm7 T C 5: 138,165,085 D642G possibly damaging Het
Med24 A T 11: 98,705,144 I941N probably damaging Het
Mrgprb8 C T 7: 48,389,228 P216S possibly damaging Het
Myo5c T A 9: 75,242,772 V13D probably damaging Het
N4bp2 T A 5: 65,808,208 I1200K possibly damaging Het
Naip6 G A 13: 100,300,653 T454M possibly damaging Het
Nfkb1 T C 3: 135,589,452 Y877C probably damaging Het
Nolc1 C A 19: 46,083,032 S473R unknown Het
Nop16 A C 13: 54,589,859 probably benign Het
Nr3c2 T C 8: 77,242,463 I959T probably damaging Het
Nup88 T G 11: 70,944,115 K692N probably benign Het
Nvl C A 1: 181,095,054 G818V probably benign Het
Olfr1046 T C 2: 86,216,856 I285V probably damaging Het
Olfr1193 T C 2: 88,678,611 V245A probably benign Het
Olfr1357 G T 10: 78,612,140 T167N probably benign Het
Olfr731 T A 14: 50,237,919 E322V probably benign Het
Olfr732 A G 14: 50,281,779 I158T probably benign Het
Olfr913 A T 9: 38,595,109 D296V probably damaging Het
Plxnc1 G A 10: 94,799,278 S1362L probably damaging Het
Ppfia2 C T 10: 106,858,253 A696V probably damaging Het
Prl A G 13: 27,059,532 Y62C probably damaging Het
Rnf135 A G 11: 80,198,936 D366G probably damaging Het
Rrp8 A G 7: 105,735,037 L86P probably damaging Het
Rsph4a T C 10: 33,909,449 V452A probably damaging Het
Runx2 C A 17: 44,639,683 V410L probably benign Het
Samd9l T C 6: 3,376,665 T199A probably damaging Het
Sik3 T C 9: 46,209,067 S745P probably damaging Het
Slc35e1 T A 8: 72,488,129 S250C probably damaging Het
Snx31 A G 15: 36,537,552 F160S probably damaging Het
Stim2 T A 5: 53,998,915 V11E probably benign Het
Tmem135 G C 7: 89,147,978 L357V probably benign Het
Tox4 T C 14: 52,286,861 S151P probably damaging Het
Trim34b A T 7: 104,336,112 D318V probably damaging Het
Ubtd1 T C 19: 42,033,756 S156P probably damaging Het
Usp34 C A 11: 23,484,143 L3240M Het
Vps13b T C 15: 35,472,066 probably benign Het
Vps13c T C 9: 67,945,828 F2401S probably damaging Het
Zbtb11 G A 16: 55,982,274 V216I probably damaging Het
Zfp931 T C 2: 178,067,796 T266A possibly damaging Het
Zfp956 A G 6: 47,956,108 M106V probably benign Het
Other mutations in Vmn1r56
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL02102:Vmn1r56 APN 7 5196336 missense possibly damaging 0.92
IGL02173:Vmn1r56 APN 7 5196118 missense probably damaging 1.00
IGL02545:Vmn1r56 APN 7 5196114 missense probably benign 0.06
R0142:Vmn1r56 UTSW 7 5196373 missense probably benign 0.17
R0599:Vmn1r56 UTSW 7 5196430 missense probably benign
R2110:Vmn1r56 UTSW 7 5196180 missense probably damaging 0.99
R3019:Vmn1r56 UTSW 7 5196062 missense probably benign
R4883:Vmn1r56 UTSW 7 5196444 missense probably damaging 0.98
R5655:Vmn1r56 UTSW 7 5195701 missense possibly damaging 0.67
R5728:Vmn1r56 UTSW 7 5196123 missense probably benign 0.42
R6083:Vmn1r56 UTSW 7 5196318 missense probably damaging 1.00
R6527:Vmn1r56 UTSW 7 5196576 missense probably benign 0.02
R6786:Vmn1r56 UTSW 7 5195962 missense probably benign 0.00
R7031:Vmn1r56 UTSW 7 5196262 nonsense probably null
R7584:Vmn1r56 UTSW 7 5195896 missense probably damaging 1.00
R7780:Vmn1r56 UTSW 7 5196517 missense possibly damaging 0.93
R8472:Vmn1r56 UTSW 7 5195905 missense probably damaging 1.00
R8813:Vmn1r56 UTSW 7 5195734 missense probably damaging 1.00
Predicted Primers PCR Primer
(F):5'- AGATCAAGGCAGGATCAGTCC -3'
(R):5'- GGTGATTCATTTAAACAGACACCAC -3'

Sequencing Primer
(F):5'- GGATCAGTCCTACTCCTGCTGG -3'
(R):5'- TTTAAACAGACACCACCAGAGAATG -3'
Posted On2021-04-30