Mutagenetix > Incidental Mutation

Incidental Mutation 'R8810:Cyp2j13'

672330

Institutional Source

Beutler Lab

Gene Symbol

Cyp2j13

Ensembl Gene

ENSMUSG00000028571

Gene Name

cytochrome P450, family 2, subfamily j, polypeptide 13

Synonyms

MMRRC Submission

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.064) question?

Stock #

R8810 (G1)

Quality Score

225.009

Status

Validated

Chromosome

Chromosomal Location

96027534-96077546 bp(-) (GRCm38)

Type of Mutation

missense

DNA Base Change (assembly)

G to A at 96056916 bp (GRCm38)

Zygosity

Heterozygous

Amino Acid Change

Histidine to Tyrosine at position 351 (H351Y)

Ref Sequence

ENSEMBL: ENSMUSP00000030305 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000030305] [ENSMUST00000097973] [ENSMUST00000107078]

AlphaFold

Q3UNV4

Predicted Effect

probably benign
Transcript: ENSMUST00000030305
AA Change: H351Y

PolyPhen 2 Score 0.300 (Sensitivity: 0.90; Specificity: 0.89)

SMART Domains

Protein: ENSMUSP00000030305
Gene: ENSMUSG00000028571
AA Change: H351Y

Domain	Start	End	E-Value	Type
transmembrane domain	10	32	N/A	INTRINSIC
Pfam:p450	44	499	6.7e-131	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000097973
AA Change: H351Y

PolyPhen 2 Score 0.300 (Sensitivity: 0.90; Specificity: 0.89)

SMART Domains

Protein: ENSMUSP00000095587
Gene: ENSMUSG00000028571
AA Change: H351Y

Domain	Start	End	E-Value	Type
transmembrane domain	10	32	N/A	INTRINSIC
Pfam:p450	44	404	8.9e-97	PFAM
low complexity region	411	420	N/A	INTRINSIC

Predicted Effect

probably benign
Transcript: ENSMUST00000107078
AA Change: H292Y

PolyPhen 2 Score 0.300 (Sensitivity: 0.90; Specificity: 0.89)

SMART Domains

Protein: ENSMUSP00000102693
Gene: ENSMUSG00000028571
AA Change: H292Y

Domain	Start	End	E-Value	Type
transmembrane domain	10	32	N/A	INTRINSIC
Pfam:p450	44	231	2.5e-39	PFAM
Pfam:p450	218	345	8.6e-41	PFAM
low complexity region	352	361	N/A	INTRINSIC

Predicted Effect

SMART Domains

Protein: ENSMUSP00000121962
Gene: ENSMUSG00000028571
AA Change: H106Y

Domain	Start	End	E-Value	Type
Pfam:p450	1	156	2.1e-50	PFAM

Coding Region Coverage

1x: 100.0%
3x: 100.0%
10x: 99.9%
20x: 99.6%

Validation Efficiency

99% (82/83)

Allele List at MGI

Other mutations in this stock

Total: 86 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Acan	T	C	7: 79,099,704	S1408P	probably damaging	Het
Acap3	T	C	4: 155,905,712	V783A	probably damaging	Het
Akap8	T	C	17: 32,306,530	N525S	probably damaging	Het
Aqp1	C	T	6: 55,336,621	T44M	probably damaging	Het
Arap1	T	C	7: 101,404,378	Y1305H	probably damaging	Het
Atg2a	T	G	19: 6,250,621	S743A	probably benign	Het
AW551984	G	T	9: 39,600,011	L133I	probably damaging	Het
Bahcc1	C	A	11: 120,273,761	P802T	possibly damaging	Het
Brd8	C	A	18: 34,609,949	V288L	probably benign	Het
Carmil2	T	C	8: 105,686,315		probably null	Het
Catspere2	G	A	1: 178,077,482	E153K	possibly damaging	Het
Ccdc162	C	T	10: 41,666,741	R379Q	probably benign	Het
Cdh16	A	G	8: 104,614,504	L116P	probably damaging	Het
Cenpj	A	T	14: 56,558,619	H260Q	possibly damaging	Het
Cenpq	A	G	17: 40,933,136	V17A	possibly damaging	Het
Cep350	T	C	1: 155,928,116	K1074E	probably damaging	Het
Chil4	C	A	3: 106,201,805	C394F	probably damaging	Het
Chst9	T	C	18: 15,717,926	I28V	probably benign	Het
Clasp2	C	A	9: 113,899,581	N873K	probably damaging	Het
Clec4b2	T	A	6: 123,181,310	M45K	probably benign	Het
Cmya5	T	A	13: 93,063,540	T3427S	possibly damaging	Het
Cnih4	A	G	1: 181,162,212	Y130C	probably damaging	Het
Cpne9	T	A	6: 113,304,545	M529K	probably damaging	Het
Ctsr	T	A	13: 61,161,825	Y190F	probably damaging	Het
Dixdc1	T	A	9: 50,701,965	Q230L	probably damaging	Het
Dpep1	A	T	8: 123,200,025	I226F	probably benign	Het
Ehd2	A	G	7: 15,957,678	V243A	probably benign	Het
Etnk2	T	A	1: 133,378,494	Y353N	probably benign	Het
Fgg	G	T	3: 83,013,015	G367V	probably damaging	Het
Gm11639	A	T	11: 104,914,895	N3076I	unknown	Het
Gm609	T	C	16: 45,443,836	T120A	probably benign	Het
Gm9772	T	C	17: 22,006,329	*61Q	probably null	Het
Grk5	T	G	19: 61,089,994	D496E	possibly damaging	Het
Hc	T	C	2: 35,019,523	N915S	probably benign	Het
Iah1	G	T	12: 21,317,387	Q31H	probably benign	Het
Insr	T	C	8: 3,169,714	D936G	probably benign	Het
Ints6	A	C	14: 62,702,453	V596G	probably benign	Het
Ispd	A	T	12: 36,390,482	N130Y	probably damaging	Het
Kcnj16	A	G	11: 111,024,851	D113G	possibly damaging	Het
Kdm4b	A	T	17: 56,399,771	I928F	probably damaging	Het
Lrrc41	C	T	4: 116,075,291		probably benign	Het
Lrrc8e	G	A	8: 4,235,070	V432I	probably benign	Het
Mamdc4	T	C	2: 25,568,489	E336G	probably benign	Het
Maml2	C	A	9: 13,621,622	Q711K		Het
Map3k14	T	C	11: 103,227,672	T563A	possibly damaging	Het
Mcu	T	A	10: 59,467,713	K101*	probably null	Het
Mettl22	T	A	16: 8,485,928	V286E	probably damaging	Het
Mon2	A	T	10: 123,009,611	N1396K	possibly damaging	Het
Mprip	T	C	11: 59,697,025		probably benign	Het
Mrpl51	C	T	6: 125,193,381	L117F	probably damaging	Het
Myo1d	C	A	11: 80,674,932	V356F	probably damaging	Het
Myo1d	T	A	11: 80,676,932	I241F	probably benign	Het
Naalad2	A	T	9: 18,385,934		probably benign	Het
Nacad	T	C	11: 6,602,853	T113A	probably benign	Het
Nrap	T	A	19: 56,364,411		probably benign	Het
Olfr1134	T	C	2: 87,656,247	I225V	possibly damaging	Het
Olfr1336	T	C	7: 6,460,764	L85P	probably damaging	Het
Olfr1358	G	A	10: 78,520,450	V281M	possibly damaging	Het
Olfr290	T	A	7: 84,916,418	I213N	possibly damaging	Het
Olfr30	T	C	11: 58,455,110	T280A	possibly damaging	Het
Olfr661	T	A	7: 104,688,180	I55N	probably damaging	Het
Osbpl3	T	C	6: 50,351,872	D117G	probably damaging	Het
Parp9	C	T	16: 35,953,611	R318*	probably null	Het
Pcdhb18	A	G	18: 37,490,321	I235V	probably benign	Het
Pex16	T	G	2: 92,379,021		probably benign	Het
Piezo2	T	A	18: 63,114,963	M489L	probably benign	Het
Pmepa1	C	A	2: 173,227,835	G271V	probably damaging	Het
Safb	A	G	17: 56,603,579	E659G	unknown	Het
Scn9a	T	C	2: 66,501,666	T1289A	probably damaging	Het
Secisbp2l	T	C	2: 125,775,676	D27G	possibly damaging	Het
Serpina1f	A	G	12: 103,693,981	V14A	probably benign	Het
Serpinb9b	C	A	13: 33,029,469	T3N	possibly damaging	Het
Sfxn5	C	T	6: 85,229,200	M315I	probably benign	Het
Slc9b2	A	G	3: 135,329,769	D333G	probably benign	Het
Sostdc1	A	G	12: 36,317,230	N135S	possibly damaging	Het
Spg11	T	G	2: 122,070,944	D1505A	probably damaging	Het
Taar7a	T	C	10: 23,993,381	N34S	probably benign	Het
Tcerg1l	C	A	7: 138,209,797	R556L	possibly damaging	Het
Tcp11l1	T	C	2: 104,688,418	K311R	probably benign	Het
Tepp	A	T	8: 95,321,255		probably benign	Het
Trbv16	T	G	6: 41,152,038	F52C	probably damaging	Het
Ttn	T	A	2: 76,895,672	R6073S	unknown	Het
Uba1y	T	C	Y: 828,818	I542T	possibly damaging	Het
Vmn1r214	T	C	13: 23,034,912	I192T	probably benign	Het
Vmn2r67	C	T	7: 85,137,138	C553Y	probably damaging	Het
Zdhhc17	G	T	10: 110,948,260	H452N	possibly damaging	Het

Other mutations in Cyp2j13

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00470:Cyp2j13	APN	4	96062038	missense	probably damaging	1.00
IGL01511:Cyp2j13	APN	4	96077315	missense	possibly damaging	0.79
IGL01540:Cyp2j13	APN	4	96068722	splice site	probably benign
IGL01923:Cyp2j13	APN	4	96062057	missense	probably benign	0.00
IGL03124:Cyp2j13	APN	4	96061922	missense	possibly damaging	0.78
IGL03389:Cyp2j13	APN	4	96068321	missense	probably damaging	1.00
R0671:Cyp2j13	UTSW	4	96071695	missense	probably damaging	0.97
R1351:Cyp2j13	UTSW	4	96056918	missense	probably benign	0.00
R1510:Cyp2j13	UTSW	4	96061972	missense	possibly damaging	0.48
R1708:Cyp2j13	UTSW	4	96062067	missense	probably damaging	0.99
R2327:Cyp2j13	UTSW	4	96059107	missense	possibly damaging	0.50
R3834:Cyp2j13	UTSW	4	96056557	critical splice donor site	probably null
R4643:Cyp2j13	UTSW	4	96056924	missense	possibly damaging	0.62
R4867:Cyp2j13	UTSW	4	96058998	missense	possibly damaging	0.68
R4900:Cyp2j13	UTSW	4	96059043	missense	probably damaging	1.00
R5175:Cyp2j13	UTSW	4	96068215	missense	possibly damaging	0.55
R5291:Cyp2j13	UTSW	4	96068329	missense	probably damaging	1.00
R5770:Cyp2j13	UTSW	4	96077432	missense	probably benign	0.23
R5837:Cyp2j13	UTSW	4	96071682	missense	probably damaging	0.98
R5912:Cyp2j13	UTSW	4	96056842	missense	probably damaging	1.00
R6283:Cyp2j13	UTSW	4	96056837	missense	possibly damaging	0.89
R6362:Cyp2j13	UTSW	4	96071695	missense	probably damaging	0.97
R6627:Cyp2j13	UTSW	4	96059106	missense	probably damaging	0.96
R7001:Cyp2j13	UTSW	4	96056875	missense	probably damaging	1.00
R7356:Cyp2j13	UTSW	4	96077418	missense	probably benign	0.23
R7620:Cyp2j13	UTSW	4	96056662	missense	probably benign	0.25
R8717:Cyp2j13	UTSW	4	96045540	missense	probably benign	0.06
R8850:Cyp2j13	UTSW	4	96068191	missense	probably benign	0.09
R8981:Cyp2j13	UTSW	4	96077290	missense	possibly damaging	0.87
R9359:Cyp2j13	UTSW	4	96061933	missense	probably damaging	1.00
R9595:Cyp2j13	UTSW	4	96045560	nonsense	probably null

Predicted Primers

PCR Primer
(F):5'- CAGACCGCTAGGGAAAGTTAC -3'
(R):5'- GCTGAGCTTCTAAACTGGGC -3'

Sequencing Primer
(F):5'- CCGCTAGGGAAAGTTACAAAGACTC -3'
(R):5'- CTAAACTGGGCTTTTTAAGAGGCAG -3'

Posted On

2021-04-30