Mutagenetix > Incidental Mutation

Incidental Mutation 'R8811:Nutm2'

672428

Institutional Source

Beutler Lab

Gene Symbol

Nutm2

Ensembl Gene

ENSMUSG00000071909

Gene Name

NUT family member 2

Synonyms

LOC328250, Gm806

MMRRC Submission

068646-MU

Accession Numbers

Essential gene?

Non essential (E-score: 0.000) question?

Stock #

R8811 (G1)

Quality Score

225.009

Status

Validated

Chromosome

Chromosomal Location

50621343-50629391 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

A to T at 50623989 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Isoleucine to Phenylalanine at position 229 (I229F)

Ref Sequence

ENSEMBL: ENSMUSP00000094390 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000096633]

AlphaFold

Q3V0C3

Predicted Effect

probably benign
Transcript: ENSMUST00000096633
AA Change: I229F

PolyPhen 2 Score 0.022 (Sensitivity: 0.95; Specificity: 0.81)

SMART Domains

Protein: ENSMUSP00000094390
Gene: ENSMUSG00000071909
AA Change: I229F

Domain	Start	End	E-Value	Type
Pfam:NUT	27	733	9e-277	PFAM

Meta Mutation Damage Score

0.0846

Coding Region Coverage

1x: 100.0%
3x: 99.9%
10x: 99.7%
20x: 99.0%

Validation Efficiency

100% (54/54)

Allele List at MGI

Other mutations in this stock

Total: 54 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Abca17	T	G	17: 24,536,212 (GRCm39)	K485T	probably benign	Het
Abcc12	G	T	8: 87,280,023 (GRCm39)	L337M	probably damaging	Het
Adcy4	T	C	14: 56,010,221 (GRCm39)	D687G	probably benign	Het
Aldoc	T	A	11: 78,215,610 (GRCm39)	I98N	probably damaging	Het
Aoah	T	A	13: 21,184,121 (GRCm39)	V395D	probably damaging	Het
Arap1	C	T	7: 101,036,403 (GRCm39)	R397W	probably damaging	Het
Arl16	A	T	11: 120,357,526 (GRCm39)	M63K	probably damaging	Het
Atf7	T	C	15: 102,502,144 (GRCm39)	D4G	probably damaging	Het
Atp6v0d2	A	T	4: 19,922,397 (GRCm39)	V34D	probably benign	Het
Calhm4	T	A	10: 33,917,661 (GRCm39)	K263N	probably benign	Het
Camk1g	C	G	1: 193,044,408 (GRCm39)	G2A	probably damaging	Het
Cenpe	A	G	3: 134,929,001 (GRCm39)	T302A	probably damaging	Het
Cps1	T	C	1: 67,253,246 (GRCm39)	V1246A	probably benign	Het
Csmd3	T	C	15: 47,560,139 (GRCm39)	D1397G		Het
Ddx39b	T	A	17: 35,463,435 (GRCm39)	S115T	probably benign	Het
Dnaja3	C	A	16: 4,514,383 (GRCm39)	T305K	probably benign	Het
Dusp7	C	G	9: 106,248,241 (GRCm39)	H290D	probably benign	Het
Emilin2	T	A	17: 71,582,282 (GRCm39)	D148V	possibly damaging	Het
Erbin	C	T	13: 104,022,824 (GRCm39)	R5Q	probably damaging	Het
Fam3b	T	C	16: 97,313,715 (GRCm39)		probably benign	Het
Foxn3	T	C	12: 99,162,951 (GRCm39)	S317G	probably benign	Het
Gipc1	T	A	8: 84,388,919 (GRCm39)	M177K	possibly damaging	Het
Grpel2	A	C	18: 61,851,823 (GRCm39)		probably benign	Het
Htr1a	G	C	13: 105,581,101 (GRCm39)	A114P	probably damaging	Het
Iqch	A	T	9: 63,452,195 (GRCm39)	M210K	possibly damaging	Het
Kdelr3	T	C	15: 79,410,052 (GRCm39)	I179T	possibly damaging	Het
Lat2	C	T	5: 134,635,553 (GRCm39)		probably benign	Het
Mcrip1	A	G	11: 120,435,605 (GRCm39)	V10A	probably damaging	Het
Mib1	C	T	18: 10,755,643 (GRCm39)	L350F	probably benign	Het
Nhlrc2	T	A	19: 56,583,344 (GRCm39)	V605E	probably benign	Het
Nup133	AAGAGA	AAGA	8: 124,638,627 (GRCm39)	900	probably null	Het
Or6f1	G	A	7: 85,970,989 (GRCm39)	T57M	probably damaging	Het
Phkb	T	C	8: 86,745,156 (GRCm39)	V611A	possibly damaging	Het
Polg2	A	T	11: 106,670,208 (GRCm39)	Y21N	probably benign	Het
Prss28	T	A	17: 25,528,627 (GRCm39)	I23N	probably benign	Het
Ptprz1	G	A	6: 23,030,661 (GRCm39)	V1856I	probably benign	Het
Slc22a22	A	T	15: 57,108,237 (GRCm39)	I526N	probably damaging	Het
Slc24a4	T	C	12: 102,180,133 (GRCm39)	F68S	probably damaging	Het
Slc37a3	A	G	6: 39,322,274 (GRCm39)	S377P	probably damaging	Het
Smoc2	T	C	17: 14,545,896 (GRCm39)	S62P	probably damaging	Het
Sox4	A	G	13: 29,136,911 (GRCm39)	S32P	probably damaging	Het
Stxbp2	A	T	8: 3,689,541 (GRCm39)	Q426L		Het
Synrg	T	G	11: 83,910,410 (GRCm39)	S937A	probably benign	Het
Tbr1	C	A	2: 61,642,196 (GRCm39)	T487K	possibly damaging	Het
Tll2	T	C	19: 41,195,012 (GRCm39)	T25A	probably benign	Het
Trim31	T	C	17: 37,210,875 (GRCm39)	F169S	probably benign	Het
Tro	G	A	X: 149,438,555 (GRCm39)	S34L	unknown	Het
Tspear	T	C	10: 77,665,463 (GRCm39)	F83S	probably benign	Het
Ubr5	C	A	15: 38,041,123 (GRCm39)	A254S		Het
Ubtfl1	A	G	9: 18,321,459 (GRCm39)	E329G	probably benign	Het
Vmn2r45	A	G	7: 8,474,881 (GRCm39)	W716R	probably damaging	Het
Vmn2r67	T	C	7: 84,799,895 (GRCm39)	M448V	probably damaging	Het
Wwc2	T	G	8: 48,336,579 (GRCm39)	I228L	possibly damaging	Het
Zbtb20	T	C	16: 43,430,857 (GRCm39)	V383A	probably benign	Het

Other mutations in Nutm2

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00885:Nutm2	APN	13	50,628,896 (GRCm39)	missense	probably benign	0.18
IGL01087:Nutm2	APN	13	50,623,665 (GRCm39)	missense	probably damaging	1.00
IGL01707:Nutm2	APN	13	50,623,753 (GRCm39)	missense	probably damaging	0.96
IGL02085:Nutm2	APN	13	50,627,829 (GRCm39)	splice site	probably null
IGL02238:Nutm2	APN	13	50,625,075 (GRCm39)	missense	probably damaging	1.00
IGL02369:Nutm2	APN	13	50,623,944 (GRCm39)	missense	probably benign	0.16
IGL02429:Nutm2	APN	13	50,623,516 (GRCm39)	missense	probably benign	0.44
IGL03083:Nutm2	APN	13	50,621,480 (GRCm39)	missense	probably damaging	0.98
R0233:Nutm2	UTSW	13	50,621,441 (GRCm39)	missense	probably benign	0.41
R0233:Nutm2	UTSW	13	50,621,441 (GRCm39)	missense	probably benign	0.41
R0321:Nutm2	UTSW	13	50,626,991 (GRCm39)	missense	probably damaging	0.98
R1481:Nutm2	UTSW	13	50,623,517 (GRCm39)	missense	probably damaging	0.99
R1605:Nutm2	UTSW	13	50,623,955 (GRCm39)	missense	possibly damaging	0.68
R1679:Nutm2	UTSW	13	50,623,422 (GRCm39)	missense	probably benign	0.17
R1744:Nutm2	UTSW	13	50,623,390 (GRCm39)	missense	probably benign	0.03
R1768:Nutm2	UTSW	13	50,627,152 (GRCm39)	missense	probably damaging	1.00
R1969:Nutm2	UTSW	13	50,627,878 (GRCm39)	missense	probably damaging	1.00
R2026:Nutm2	UTSW	13	50,628,856 (GRCm39)	missense	probably benign	0.00
R2187:Nutm2	UTSW	13	50,621,453 (GRCm39)	missense	probably benign	0.00
R3912:Nutm2	UTSW	13	50,626,976 (GRCm39)	missense	possibly damaging	0.92
R4025:Nutm2	UTSW	13	50,623,389 (GRCm39)	missense	probably benign
R4367:Nutm2	UTSW	13	50,623,920 (GRCm39)	missense	probably benign	0.01
R4668:Nutm2	UTSW	13	50,627,033 (GRCm39)	missense	probably benign	0.18
R4940:Nutm2	UTSW	13	50,628,909 (GRCm39)	missense	possibly damaging	0.58
R4987:Nutm2	UTSW	13	50,626,379 (GRCm39)	missense	possibly damaging	0.93
R4988:Nutm2	UTSW	13	50,626,379 (GRCm39)	missense	possibly damaging	0.93
R5821:Nutm2	UTSW	13	50,623,891 (GRCm39)	missense	probably benign	0.01
R5986:Nutm2	UTSW	13	50,628,496 (GRCm39)	missense	probably damaging	1.00
R6189:Nutm2	UTSW	13	50,623,774 (GRCm39)	missense	possibly damaging	0.91
R7101:Nutm2	UTSW	13	50,626,934 (GRCm39)	missense	probably benign	0.00
R7192:Nutm2	UTSW	13	50,627,105 (GRCm39)	missense	probably damaging	1.00
R7394:Nutm2	UTSW	13	50,624,043 (GRCm39)	missense	probably damaging	1.00
R7591:Nutm2	UTSW	13	50,627,903 (GRCm39)	missense	probably damaging	0.98
R8217:Nutm2	UTSW	13	50,623,759 (GRCm39)	missense	probably benign	0.16
R8347:Nutm2	UTSW	13	50,626,373 (GRCm39)	missense	probably benign	0.05
R9093:Nutm2	UTSW	13	50,628,964 (GRCm39)	missense	probably damaging	1.00
R9420:Nutm2	UTSW	13	50,626,964 (GRCm39)	missense	probably damaging	1.00
R9507:Nutm2	UTSW	13	50,621,455 (GRCm39)	missense	probably benign
R9532:Nutm2	UTSW	13	50,628,475 (GRCm39)	missense	probably benign	0.00
R9632:Nutm2	UTSW	13	50,628,901 (GRCm39)	missense	probably benign	0.10
R9650:Nutm2	UTSW	13	50,623,755 (GRCm39)	missense	probably benign	0.25
R9683:Nutm2	UTSW	13	50,629,017 (GRCm39)	missense	possibly damaging	0.92
X0028:Nutm2	UTSW	13	50,626,990 (GRCm39)	missense	probably benign	0.04

Predicted Primers

PCR Primer
(F):5'- GAATTGCTTCGACTGTCCAGC -3'
(R):5'- GCTTTCTGAAGTGGACCCATC -3'

Sequencing Primer
(F):5'- AACATGGATCCTGGGTCCTCAC -3'
(R):5'- GTGGACCCATCAACTTCAGC -3'

Posted On

2021-04-30