Mutagenetix > Incidental Mutation

Incidental Mutation 'R8833:Pus7l'

674003

Institutional Source

Beutler Lab

Gene Symbol

Pus7l

Ensembl Gene

ENSMUSG00000033356

Gene Name

pseudouridylate synthase 7-like

Synonyms

3000003F02Rik

MMRRC Submission

068661-MU

Accession Numbers

Essential gene?

Non essential (E-score: 0.000) question?

Stock #

R8833 (G1)

Quality Score

225.009

Status

Validated

Chromosome

Chromosomal Location

94420569-94441428 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

A to T at 94438143 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Phenylalanine to Tyrosine at position 234 (F234Y)

Ref Sequence

ENSEMBL: ENSMUSP00000044075 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000049151] [ENSMUST00000074936] [ENSMUST00000109248] [ENSMUST00000134061]

AlphaFold

Q8CE46

Predicted Effect

probably damaging
Transcript: ENSMUST00000049151
AA Change: F234Y

PolyPhen 2 Score 0.980 (Sensitivity: 0.75; Specificity: 0.96)

SMART Domains

Protein: ENSMUSP00000044075
Gene: ENSMUSG00000033356
AA Change: F234Y

Domain	Start	End	E-Value	Type
Pfam:TruD	280	697	1e-70	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000074936

SMART Domains

Protein: ENSMUSP00000074471
Gene: ENSMUSG00000059883

Domain	Start	End	E-Value	Type
PDB:1WH4\|A	1	114	1e-78	PDB
Pfam:Pkinase_Tyr	187	454	3.3e-53	PFAM
Pfam:Pkinase	187	456	4.9e-53	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000109248

SMART Domains

Protein: ENSMUSP00000104871
Gene: ENSMUSG00000059883

Domain	Start	End	E-Value	Type
Pfam:Death	20	101	1.6e-6	PFAM
Pfam:Pkinase_Tyr	187	452	1.9e-51	PFAM
Pfam:Pkinase	188	452	1.3e-54	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000134061

Coding Region Coverage

1x: 100.0%
3x: 99.9%
10x: 99.5%
20x: 98.5%

Validation Efficiency

100% (53/53)

Allele List at MGI

Other mutations in this stock

Total: 56 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Akr1c6	T	A	13: 4,496,377 (GRCm39)	D132E	possibly damaging	Het
Armh4	C	T	14: 50,011,318 (GRCm39)	V130I	probably benign	Het
Atp10b	A	G	11: 43,112,986 (GRCm39)	E844G	probably damaging	Het
Bbx	T	A	16: 50,045,629 (GRCm39)	M311L	probably benign	Het
Bzw2	A	T	12: 36,169,069 (GRCm39)	M153K	probably benign	Het
C1qtnf6	G	T	15: 78,409,574 (GRCm39)	T91K	probably benign	Het
Cdh4	A	G	2: 179,535,828 (GRCm39)	D793G	possibly damaging	Het
Ces4a	A	G	8: 105,858,614 (GRCm39)	I11V	probably benign	Het
Cpne9	T	C	6: 113,281,473 (GRCm39)	L518P	probably damaging	Het
Dip2c	T	A	13: 9,625,519 (GRCm39)		probably null	Het
Fam135b	T	C	15: 71,334,783 (GRCm39)	N804D	probably benign	Het
Frem3	G	A	8: 81,339,401 (GRCm39)	D565N	probably benign	Het
Fscb	T	A	12: 64,519,997 (GRCm39)	T490S	unknown	Het
Fuca1	A	G	4: 135,648,206 (GRCm39)	D31G	probably damaging	Het
Gbp8	G	T	5: 105,166,668 (GRCm39)	N220K	possibly damaging	Het
Gfra2	T	C	14: 71,163,337 (GRCm39)	F207L	probably damaging	Het
Grap2	A	G	15: 80,522,684 (GRCm39)	N70S	probably benign	Het
Ifna13	C	A	4: 88,562,157 (GRCm39)	E156*	probably null	Het
Jmjd1c	G	A	10: 67,054,162 (GRCm39)	R22H	probably benign	Het
Macf1	A	G	4: 123,365,134 (GRCm39)	V3209A	probably benign	Het
Muc5b	A	G	7: 141,412,105 (GRCm39)	T1684A	unknown	Het
Naip5	T	A	13: 100,359,442 (GRCm39)	E598V	probably damaging	Het
Niban1	T	A	1: 151,520,681 (GRCm39)	V125E	probably damaging	Het
Notch1	G	A	2: 26,371,615 (GRCm39)	T278I	probably damaging	Het
Or4d10c	A	G	19: 12,065,643 (GRCm39)	V171A	possibly damaging	Het
Or4k5	A	T	14: 50,385,823 (GRCm39)	C169*	probably null	Het
Or52z13	T	G	7: 103,247,444 (GRCm39)	F307C	possibly damaging	Het
Or5k14	A	T	16: 58,692,959 (GRCm39)	Y185N	probably damaging	Het
Orm1	A	T	4: 63,262,938 (GRCm39)	E35V	probably damaging	Het
Pak1	T	A	7: 97,503,839 (GRCm39)	I58N	possibly damaging	Het
Pard3b	A	G	1: 62,384,158 (GRCm39)	E841G	probably benign	Het
Pcdhb9	G	T	18: 37,534,468 (GRCm39)	R154I	probably benign	Het
Pdpr	G	A	8: 111,852,312 (GRCm39)	V560I	probably damaging	Het
Pkdcc	T	C	17: 83,531,355 (GRCm39)	F455L	probably damaging	Het
Potefam3c	A	T	8: 69,881,982 (GRCm39)	D331E	probably benign	Het
Rab3gap2	T	A	1: 184,990,722 (GRCm39)	L632Q	probably damaging	Het
Rarb	T	A	14: 16,819,015 (GRCm38)		probably benign	Het
Ro60	T	A	1: 143,641,517 (GRCm39)	K315*	probably null	Het
Rom1	A	T	19: 8,905,471 (GRCm39)	H236Q	possibly damaging	Het
Secisbp2	T	C	13: 51,819,352 (GRCm39)	S311P	probably benign	Het
Slc26a1	T	C	5: 108,820,182 (GRCm39)	D355G	probably benign	Het
Slc28a3	C	T	13: 58,707,077 (GRCm39)	A574T	probably damaging	Het
Sox11	A	G	12: 27,392,313 (GRCm39)	V32A	possibly damaging	Het
Spata17	T	C	1: 186,915,436 (GRCm39)	Y107C	probably damaging	Het
Speer1a	C	A	5: 11,394,205 (GRCm39)	Y104*	probably null	Het
Stxbp5l	T	C	16: 37,024,814 (GRCm39)	T595A	probably benign	Het
Syt11	T	C	3: 88,655,149 (GRCm39)	D78G	probably damaging	Het
Tatdn2	T	G	6: 113,684,348 (GRCm39)	I674S	probably damaging	Het
Tex14	T	A	11: 87,383,878 (GRCm39)	S189R	probably benign	Het
Tln2	C	A	9: 67,128,693 (GRCm39)	E1465D	possibly damaging	Het
Tor3a	T	C	1: 156,483,373 (GRCm39)	T350A	probably benign	Het
Ttr	T	G	18: 20,799,550 (GRCm39)	V36G	probably damaging	Het
Vmn1r129	A	T	7: 21,095,205 (GRCm39)	H4Q	probably null	Het
Vmn1r32	A	G	6: 66,530,623 (GRCm39)	M51T	possibly damaging	Het
Zfp141	T	C	7: 42,125,687 (GRCm39)	T262A	possibly damaging	Het
Zfp980	T	A	4: 145,427,596 (GRCm39)	N108K	probably benign	Het

Other mutations in Pus7l

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01713:Pus7l	APN	15	94,429,493 (GRCm39)	missense	probably benign	0.07
IGL02049:Pus7l	APN	15	94,438,059 (GRCm39)	missense	probably damaging	1.00
IGL02484:Pus7l	APN	15	94,427,369 (GRCm39)	missense	possibly damaging	0.70
IGL02731:Pus7l	APN	15	94,421,345 (GRCm39)	missense	probably benign	0.03
IGL03252:Pus7l	APN	15	94,423,691 (GRCm39)	missense	probably benign	0.00
IGL03392:Pus7l	APN	15	94,434,449 (GRCm39)	missense	probably damaging	1.00
R0638:Pus7l	UTSW	15	94,421,298 (GRCm39)	missense	probably benign	0.20
R0848:Pus7l	UTSW	15	94,438,393 (GRCm39)	missense	probably benign	0.16
R1646:Pus7l	UTSW	15	94,431,517 (GRCm39)	missense	probably benign	0.33
R1785:Pus7l	UTSW	15	94,438,518 (GRCm39)	missense	probably benign	0.04
R2046:Pus7l	UTSW	15	94,438,666 (GRCm39)	missense	probably benign	0.01
R2206:Pus7l	UTSW	15	94,421,471 (GRCm39)	missense	probably damaging	1.00
R2210:Pus7l	UTSW	15	94,438,173 (GRCm39)	missense	possibly damaging	0.95
R3618:Pus7l	UTSW	15	94,425,788 (GRCm39)	missense	probably damaging	0.97
R4485:Pus7l	UTSW	15	94,421,371 (GRCm39)	missense	probably benign	0.00
R4487:Pus7l	UTSW	15	94,429,498 (GRCm39)	missense	possibly damaging	0.46
R4686:Pus7l	UTSW	15	94,438,092 (GRCm39)	missense	probably damaging	1.00
R4739:Pus7l	UTSW	15	94,438,591 (GRCm39)	missense	probably benign	0.02
R4975:Pus7l	UTSW	15	94,427,369 (GRCm39)	missense	possibly damaging	0.70
R5431:Pus7l	UTSW	15	94,427,367 (GRCm39)	missense	probably damaging	1.00
R5567:Pus7l	UTSW	15	94,425,746 (GRCm39)	missense	probably benign	0.00
R5570:Pus7l	UTSW	15	94,425,746 (GRCm39)	missense	probably benign	0.00
R5896:Pus7l	UTSW	15	94,427,332 (GRCm39)	splice site	probably null
R6408:Pus7l	UTSW	15	94,429,456 (GRCm39)	missense	probably benign	0.06
R6681:Pus7l	UTSW	15	94,425,746 (GRCm39)	missense	probably benign	0.00
R7344:Pus7l	UTSW	15	94,438,498 (GRCm39)	missense	probably benign	0.01
R7811:Pus7l	UTSW	15	94,438,707 (GRCm39)	missense	probably damaging	1.00
R8412:Pus7l	UTSW	15	94,425,856 (GRCm39)	missense	probably benign	0.44
R9177:Pus7l	UTSW	15	94,431,445 (GRCm39)	missense	probably benign	0.00
R9268:Pus7l	UTSW	15	94,431,445 (GRCm39)	missense	probably benign	0.00
R9503:Pus7l	UTSW	15	94,438,666 (GRCm39)	missense	probably benign	0.01
R9525:Pus7l	UTSW	15	94,438,764 (GRCm39)	missense	probably damaging	1.00
R9526:Pus7l	UTSW	15	94,425,781 (GRCm39)	missense	probably damaging	1.00
X0065:Pus7l	UTSW	15	94,438,654 (GRCm39)	missense	possibly damaging	0.87
X0066:Pus7l	UTSW	15	94,427,374 (GRCm39)	missense	possibly damaging	0.61

Predicted Primers

PCR Primer
(F):5'- TTCCGGGTGAGATCTCTTCC -3'
(R):5'- TGAATTGTCCCTAGGCAAGATC -3'

Sequencing Primer
(F):5'- GTGAGATCTCTTCCCGCGTG -3'
(R):5'- TTGACAAAAACCGCAGAGCTGTTC -3'

Posted On

2021-07-15