Mutagenetix > Incidental Mutation

Incidental Mutation 'R8856:Tecpr1'

675324

Institutional Source

Beutler Lab

Gene Symbol

Tecpr1

Ensembl Gene

ENSMUSG00000066621

Gene Name

tectonin beta-propeller repeat containing 1

Synonyms

2210010N04Rik

MMRRC Submission

068737-MU

Accession Numbers

Essential gene?

Non essential (E-score: 0.000) question?

Stock #

R8856 (G1)

Quality Score

225.009

Status

Not validated

Chromosome

Chromosomal Location

144131260-144160433 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

T to C at 144153117 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Glutamic Acid to Glycine at position 204 (E204G)

Ref Sequence

ENSEMBL: ENSMUSP00000082844 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000085701]

AlphaFold

Q80VP0

Predicted Effect

possibly damaging
Transcript: ENSMUST00000085701
AA Change: E204G

PolyPhen 2 Score 0.945 (Sensitivity: 0.80; Specificity: 0.95)

SMART Domains

Protein: ENSMUSP00000082844
Gene: ENSMUSG00000066621
AA Change: E204G

Domain	Start	End	E-Value	Type
TECPR	23	59	8.98e1	SMART
DysFN	64	125	6.72e-24	SMART
DysFC	137	170	1.89e-9	SMART
TECPR	192	225	1.79e-1	SMART
TECPR	234	270	2.5e-9	SMART
TECPR	279	317	4.99e-9	SMART
TECPR	326	361	2.42e-7	SMART
low complexity region	381	394	N/A	INTRINSIC
PH	614	724	1.69e-2	SMART
TECPR	711	750	1.88e-4	SMART
TECPR	766	800	3.27e-4	SMART
DysFN	821	882	2.95e-20	SMART
DysFC	893	926	1.66e-14	SMART
TECPR	940	974	1.69e1	SMART
TECPR	983	1019	1.45e-5	SMART
TECPR	1028	1065	1.51e-8	SMART
TECPR	1074	1109	1.59e-2	SMART
low complexity region	1125	1137	N/A	INTRINSIC

Meta Mutation Damage Score

0.0866

Coding Region Coverage

1x: 100.0%
3x: 99.9%
10x: 99.7%
20x: 98.9%

Validation Efficiency

MGI Phenotype

FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes a tethering factor involved in autophagy. The encoded protein is found at autolysosomes, and is involved in targeting protein aggregates, damaged mitochondria, and bacterial pathogens for autophagy [provided by RefSeq, Nov 2012]
PHENOTYPE: Mice homozygous for a knock-out allele exhibit impaired selective autophagy and abnormal response to bacterial infection in MEFs. [provided by MGI curators]

Allele List at MGI

Other mutations in this stock

Total: 92 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
A2m	G	A	6: 121,618,349 (GRCm39)	R214H	probably benign	Het
Abca4	A	G	3: 121,906,096 (GRCm39)	S822G	probably benign	Het
Adgrv1	T	A	13: 81,707,621 (GRCm39)	I1262F	probably benign	Het
Agbl2	A	G	2: 90,632,088 (GRCm39)	D482G	probably damaging	Het
Asph	T	A	4: 9,630,947 (GRCm39)	T134S	possibly damaging	Het
Cacna1a	C	T	8: 85,286,070 (GRCm39)	A905V	probably benign	Het
Cacna1b	C	T	2: 24,569,530 (GRCm39)	R798H	probably benign	Het
Cpne8	G	T	15: 90,486,044 (GRCm39)	Q140K	probably benign	Het
Crocc2	A	T	1: 93,120,847 (GRCm39)	N538I	probably benign	Het
Cyp2j9	T	A	4: 96,462,184 (GRCm39)	I366F	probably damaging	Het
Dchs1	A	T	7: 105,410,064 (GRCm39)	D1769E	probably damaging	Het
Def6	A	T	17: 28,435,972 (GRCm39)	I44F	probably damaging	Het
Dnah7a	G	A	1: 53,462,422 (GRCm39)	T3723M	probably damaging	Het
Ecd	T	A	14: 20,387,140 (GRCm39)	Y198F	probably damaging	Het
Ecel1	A	C	1: 87,079,760 (GRCm39)	M451R	probably damaging	Het
Eea1	A	G	10: 95,831,506 (GRCm39)	D199G	probably benign	Het
Efna5	A	T	17: 62,914,374 (GRCm39)	I217N	unknown	Het
F13a1	A	T	13: 37,100,859 (GRCm39)	D428E	probably damaging	Het
Fads1	T	G	19: 10,170,276 (GRCm39)	I272S	probably benign	Het
Fam149a	C	T	8: 45,834,611 (GRCm39)	A63T		Het
Fam83a	A	T	15: 57,872,977 (GRCm39)	N269Y	probably damaging	Het
Fasn	G	A	11: 120,708,979 (GRCm39)	T568I	possibly damaging	Het
Fbn1	A	G	2: 125,156,637 (GRCm39)	S2363P	probably damaging	Het
Fbxl4	T	A	4: 22,390,803 (GRCm39)	W329R	probably damaging	Het
Fgf12	A	T	16: 28,008,233 (GRCm39)	V189E	probably damaging	Het
Frmd4b	A	T	6: 97,269,359 (GRCm39)	Y984*	probably null	Het
Galm	A	G	17: 80,490,661 (GRCm39)	T273A	possibly damaging	Het
Gm43302	A	G	5: 105,438,739 (GRCm39)	S50P	probably damaging	Het
Gm45861	C	T	8: 28,010,788 (GRCm39)	S561L	unknown	Het
Gnao1	A	G	8: 94,538,045 (GRCm39)	I28V	probably benign	Het
Golga4	A	G	9: 118,385,779 (GRCm39)	N967S	probably damaging	Het
Gpr155	A	T	2: 73,203,993 (GRCm39)	F274I	probably benign	Het
Grm1	A	C	10: 10,595,092 (GRCm39)	N845K	probably damaging	Het
Hnrnpa2b1	A	T	6: 51,443,120 (GRCm39)		probably null	Het
Hsf4	G	T	8: 105,996,628 (GRCm39)	D18Y	probably null	Het
Htt	T	A	5: 35,060,675 (GRCm39)	D2774E	probably benign	Het
Iars2	A	G	1: 185,028,621 (GRCm39)	I679T	probably benign	Het
Irf4	T	C	13: 30,945,414 (GRCm39)	F387L	probably damaging	Het
Itgb5	A	G	16: 33,720,962 (GRCm39)	Y342C	probably damaging	Het
Kcnmb4	A	G	10: 116,282,299 (GRCm39)	W133R	possibly damaging	Het
Ldhc	A	T	7: 46,525,999 (GRCm39)	H271L	probably benign	Het
Lmtk2	C	A	5: 144,113,079 (GRCm39)	D1266E	probably damaging	Het
Lrrtm1	C	A	6: 77,221,807 (GRCm39)	N421K	possibly damaging	Het
Ly9	G	A	1: 171,432,587 (GRCm39)	T142I	probably benign	Het
Manba	A	G	3: 135,223,764 (GRCm39)	Y217C	probably damaging	Het
Mapkbp1	T	C	2: 119,845,109 (GRCm39)	L330P	probably damaging	Het
Marchf2	A	T	17: 33,915,165 (GRCm39)	V143E	probably benign	Het
Mmel1	A	T	4: 154,969,478 (GRCm39)	D191V	possibly damaging	Het
Mrgpra1	A	T	7: 46,985,583 (GRCm39)	I32N	probably benign	Het
Mroh2b	C	T	15: 4,960,510 (GRCm39)	Q748*	probably null	Het
Mrpl34	T	G	8: 71,918,024 (GRCm39)	W66G	probably damaging	Het
Muc21	T	C	17: 35,931,865 (GRCm39)	T774A	unknown	Het
Nde1	T	A	16: 14,001,446 (GRCm39)	S165T		Het
Nek10	T	G	14: 14,937,610 (GRCm38)	I776M	probably damaging	Het
Nell2	A	G	15: 95,281,552 (GRCm39)	S385P	probably damaging	Het
Nsf	A	T	11: 103,821,568 (GRCm39)	F29Y	possibly damaging	Het
Nsmaf	A	T	4: 6,433,320 (GRCm39)	Y133*	probably null	Het
Ogfr	GGCCAGAGGACCCCAAAAGCCAGGTGGAGCCAGAGGACCCCAAAAGCCAGGTGGAGCCAGAGGACCCCAAAAGCCAGGTGGAGCCAGAGGACCCCAAAAGCCAGGTGGGGCCAGAGGACCCCCAAAGCCAGGTGG	GGCCAGAGGACCCCAAAAGCCAGGTGGAGCCAGAGGACCCCAAAAGCCAGGTGGAGCCAGAGGACCCCAAAAGCCAGGTGGGGCCAGAGGACCCCCAAAGCCAGGTGG	2: 180,237,059 (GRCm39)		probably benign	Het
Or14j8	A	T	17: 38,263,091 (GRCm39)	S275T	possibly damaging	Het
Pcdhb8	A	G	18: 37,489,776 (GRCm39)	I485V	probably benign	Het
Poteg	T	A	8: 27,938,033 (GRCm39)	M1K	probably null	Het
Pramel24	A	T	4: 143,453,303 (GRCm39)	N137I	probably benign	Het
Prdm5	G	A	6: 65,860,569 (GRCm39)	V418I	possibly damaging	Het
Psmc6	T	A	14: 45,578,320 (GRCm39)	C228S	probably damaging	Het
Ptgfrn	C	T	3: 100,963,927 (GRCm39)	A562T	possibly damaging	Het
Ralgapa2	G	T	2: 146,184,139 (GRCm39)	Q1576K	probably benign	Het
Ranbp9	C	T	13: 43,567,506 (GRCm39)	G400D	probably damaging	Het
Rgs11	A	T	17: 26,423,484 (GRCm39)	I134F	probably damaging	Het
Rnf150	T	A	8: 83,762,715 (GRCm39)	C317S	probably damaging	Het
Rrm2b	G	A	15: 37,960,858 (GRCm39)		probably benign	Het
Scai	T	C	2: 38,996,978 (GRCm39)	Q272R	probably benign	Het
Sec62	C	T	3: 30,847,506 (GRCm39)	R4C	possibly damaging	Het
Sgo2b	C	A	8: 64,393,091 (GRCm39)	L115F	probably null	Het
Slc44a3	G	A	3: 121,307,456 (GRCm39)	P177S	probably damaging	Het
Slc45a4	G	A	15: 73,457,966 (GRCm39)	L528F	probably damaging	Het
Slco1a1	G	T	6: 141,857,624 (GRCm39)	A569D	probably damaging	Het
Stam2	G	T	2: 52,604,984 (GRCm39)	Q184K	probably damaging	Het
Tada2b	A	T	5: 36,641,166 (GRCm39)	L79Q	probably damaging	Het
Tecta	A	T	9: 42,284,597 (GRCm39)	D829E	probably benign	Het
Tepsin	A	G	11: 119,982,654 (GRCm39)	V472A	probably benign	Het
Tnfrsf1a	G	A	6: 125,334,688 (GRCm39)	M109I	possibly damaging	Het
Trim42	A	T	9: 97,245,275 (GRCm39)	Y508*	probably null	Het
Trmo	T	G	4: 46,387,625 (GRCm39)	N65T	probably benign	Het
Tspear	G	T	10: 77,665,471 (GRCm39)	E86*	probably null	Het
Ubr1	A	T	2: 120,734,523 (GRCm39)	S1126T	probably damaging	Het
Usp50	C	A	2: 126,622,477 (GRCm39)	D28Y	probably damaging	Het
Utp6	T	A	11: 79,842,455 (GRCm39)	I225F	probably benign	Het
Utrn	T	C	10: 12,543,351 (GRCm39)	T1766A	probably benign	Het
Vcl	T	A	14: 21,045,160 (GRCm39)	N288K	probably benign	Het
Vmn2r69	T	C	7: 85,061,663 (GRCm39)	N104D	probably benign	Het
Zc3h7b	G	A	15: 81,656,681 (GRCm39)	R166Q	probably benign	Het
Zfhx4	T	A	3: 5,455,484 (GRCm39)	S1159R	probably benign	Het

Other mutations in Tecpr1

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01399:Tecpr1	APN	5	144,145,411 (GRCm39)	critical splice donor site	probably null
IGL01774:Tecpr1	APN	5	144,148,358 (GRCm39)	missense	probably damaging	0.97
IGL01960:Tecpr1	APN	5	144,153,737 (GRCm39)	missense	probably benign	0.00
IGL01973:Tecpr1	APN	5	144,134,806 (GRCm39)	splice site	probably benign
IGL02244:Tecpr1	APN	5	144,146,821 (GRCm39)	missense	probably benign
IGL02247:Tecpr1	APN	5	144,143,372 (GRCm39)	missense	possibly damaging	0.64
IGL02423:Tecpr1	APN	5	144,140,305 (GRCm39)	missense	possibly damaging	0.88
IGL02679:Tecpr1	APN	5	144,143,364 (GRCm39)	missense	probably benign	0.28
larghissimo	UTSW	5	144,154,075 (GRCm39)	missense	probably damaging	1.00
PIT4531001:Tecpr1	UTSW	5	144,150,885 (GRCm39)	missense	probably damaging	0.96
R0121:Tecpr1	UTSW	5	144,147,017 (GRCm39)	missense	probably benign	0.02
R0125:Tecpr1	UTSW	5	144,134,717 (GRCm39)	missense	probably damaging	1.00
R0194:Tecpr1	UTSW	5	144,155,335 (GRCm39)	missense	probably damaging	1.00
R0376:Tecpr1	UTSW	5	144,144,294 (GRCm39)	missense	possibly damaging	0.94
R0441:Tecpr1	UTSW	5	144,132,759 (GRCm39)	missense	probably benign
R0504:Tecpr1	UTSW	5	144,150,899 (GRCm39)	missense	probably damaging	0.99
R0538:Tecpr1	UTSW	5	144,143,092 (GRCm39)	missense	probably damaging	0.99
R0586:Tecpr1	UTSW	5	144,154,219 (GRCm39)	missense	probably damaging	1.00
R0607:Tecpr1	UTSW	5	144,149,408 (GRCm39)	missense	probably damaging	1.00
R0608:Tecpr1	UTSW	5	144,148,317 (GRCm39)	missense	probably damaging	1.00
R0656:Tecpr1	UTSW	5	144,150,871 (GRCm39)	splice site	probably null
R0835:Tecpr1	UTSW	5	144,149,410 (GRCm39)	missense	possibly damaging	0.81
R1080:Tecpr1	UTSW	5	144,153,747 (GRCm39)	missense	probably damaging	1.00
R1394:Tecpr1	UTSW	5	144,143,357 (GRCm39)	missense	possibly damaging	0.77
R1597:Tecpr1	UTSW	5	144,151,128 (GRCm39)	missense	probably benign	0.00
R1663:Tecpr1	UTSW	5	144,134,762 (GRCm39)	missense	probably benign	0.17
R1785:Tecpr1	UTSW	5	144,145,463 (GRCm39)	missense	probably benign	0.01
R1786:Tecpr1	UTSW	5	144,145,463 (GRCm39)	missense	probably benign	0.01
R1833:Tecpr1	UTSW	5	144,145,426 (GRCm39)	missense	probably damaging	0.99
R1883:Tecpr1	UTSW	5	144,143,347 (GRCm39)	missense	probably benign	0.03
R1988:Tecpr1	UTSW	5	144,141,515 (GRCm39)	missense	possibly damaging	0.94
R2130:Tecpr1	UTSW	5	144,145,463 (GRCm39)	missense	probably benign	0.01
R2131:Tecpr1	UTSW	5	144,145,463 (GRCm39)	missense	probably benign	0.01
R2132:Tecpr1	UTSW	5	144,145,463 (GRCm39)	missense	probably benign	0.01
R2133:Tecpr1	UTSW	5	144,145,463 (GRCm39)	missense	probably benign	0.01
R2172:Tecpr1	UTSW	5	144,148,274 (GRCm39)	missense	probably benign	0.10
R2172:Tecpr1	UTSW	5	144,133,235 (GRCm39)	missense	probably damaging	1.00
R2290:Tecpr1	UTSW	5	144,150,881 (GRCm39)	missense	probably damaging	0.99
R3691:Tecpr1	UTSW	5	144,146,797 (GRCm39)	missense	probably benign	0.10
R4027:Tecpr1	UTSW	5	144,143,077 (GRCm39)	missense	probably benign	0.41
R4587:Tecpr1	UTSW	5	144,149,408 (GRCm39)	missense	probably damaging	0.96
R4684:Tecpr1	UTSW	5	144,144,255 (GRCm39)	missense	probably benign	0.16
R4864:Tecpr1	UTSW	5	144,150,935 (GRCm39)	missense	probably benign	0.00
R4932:Tecpr1	UTSW	5	144,141,476 (GRCm39)	missense	probably damaging	0.97
R4955:Tecpr1	UTSW	5	144,154,075 (GRCm39)	missense	probably damaging	1.00
R5043:Tecpr1	UTSW	5	144,134,672 (GRCm39)	splice site	probably null
R5459:Tecpr1	UTSW	5	144,144,234 (GRCm39)	missense	probably damaging	1.00
R5579:Tecpr1	UTSW	5	144,151,162 (GRCm39)	missense	possibly damaging	0.55
R5677:Tecpr1	UTSW	5	144,155,451 (GRCm39)	nonsense	probably null
R5679:Tecpr1	UTSW	5	144,144,241 (GRCm39)	missense	possibly damaging	0.69
R5802:Tecpr1	UTSW	5	144,143,364 (GRCm39)	missense	probably benign	0.28
R6000:Tecpr1	UTSW	5	144,148,239 (GRCm39)	missense	probably benign	0.02
R6022:Tecpr1	UTSW	5	144,136,009 (GRCm39)	missense	possibly damaging	0.95
R6114:Tecpr1	UTSW	5	144,141,458 (GRCm39)	missense	possibly damaging	0.81
R6251:Tecpr1	UTSW	5	144,135,394 (GRCm39)	missense	probably damaging	0.97
R6372:Tecpr1	UTSW	5	144,153,776 (GRCm39)	missense	probably damaging	1.00
R6493:Tecpr1	UTSW	5	144,146,792 (GRCm39)	missense	probably benign
R7276:Tecpr1	UTSW	5	144,153,838 (GRCm39)	nonsense	probably null
R7314:Tecpr1	UTSW	5	144,154,150 (GRCm39)	missense	probably damaging	1.00
R7375:Tecpr1	UTSW	5	144,145,417 (GRCm39)	missense	possibly damaging	0.68
R7632:Tecpr1	UTSW	5	144,155,544 (GRCm39)	missense	probably benign	0.03
R7702:Tecpr1	UTSW	5	144,140,236 (GRCm39)	missense	probably damaging	1.00
R8135:Tecpr1	UTSW	5	144,135,420 (GRCm39)	missense	probably damaging	0.99
R8406:Tecpr1	UTSW	5	144,137,658 (GRCm39)	missense	probably damaging	1.00
R8844:Tecpr1	UTSW	5	144,153,117 (GRCm39)	missense	possibly damaging	0.94
R8857:Tecpr1	UTSW	5	144,153,117 (GRCm39)	missense	possibly damaging	0.94
R8866:Tecpr1	UTSW	5	144,153,117 (GRCm39)	missense	possibly damaging	0.94
R8903:Tecpr1	UTSW	5	144,150,845 (GRCm39)	intron	probably benign
R8926:Tecpr1	UTSW	5	144,153,780 (GRCm39)	missense	probably damaging	1.00
R9218:Tecpr1	UTSW	5	144,154,049 (GRCm39)	missense	possibly damaging	0.70
R9423:Tecpr1	UTSW	5	144,155,396 (GRCm39)	missense	probably damaging	0.98
RF001:Tecpr1	UTSW	5	144,154,204 (GRCm39)	missense	probably damaging	0.99
Z1176:Tecpr1	UTSW	5	144,155,409 (GRCm39)	missense	probably benign	0.28

Predicted Primers

PCR Primer
(F):5'- ACCATACAAAATCTTGGGCAAG -3'
(R):5'- CTTGCTGAGTGTGGAAGGAC -3'

Sequencing Primer
(F):5'- CTTGGGCAAGATGGTGGTG -3'
(R):5'- CTGAGTGTGGAAGGACTGGAG -3'

Posted On

2021-07-15