Mutagenetix > Incidental Mutation

Incidental Mutation 'R8864:Eif3b'

675806

Institutional Source

Beutler Lab

Gene Symbol

Eif3b

Ensembl Gene

ENSMUSG00000056076

Gene Name

eukaryotic translation initiation factor 3, subunit B

Synonyms

Eif3s9, EIF3-P116, D5Wsu45e

MMRRC Submission

Accession Numbers

Essential gene?

Essential (E-score: 1.000) question?

Stock #

R8864 (G1)

Quality Score

225.009

Status

Validated

Chromosome

Chromosomal Location

140419328-140443360 bp(+) (GRCm38)

Type of Mutation

missense

DNA Base Change (assembly)

T to C at 140426532 bp (GRCm38)

Zygosity

Heterozygous

Amino Acid Change

Valine to Alanine at position 252 (V252A)

Ref Sequence

ENSEMBL: ENSMUSP00000098076 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000100507]

AlphaFold

Q8JZQ9

Predicted Effect

probably benign
Transcript: ENSMUST00000100507
AA Change: V252A

PolyPhen 2 Score 0.158 (Sensitivity: 0.92; Specificity: 0.87)

SMART Domains

Protein: ENSMUSP00000098076
Gene: ENSMUSG00000056076
AA Change: V252A

Domain	Start	End	E-Value	Type
low complexity region	4	25	N/A	INTRINSIC
low complexity region	46	59	N/A	INTRINSIC
low complexity region	111	128	N/A	INTRINSIC
RRM	175	253	4.14e-7	SMART
Blast:WD40	317	350	4e-7	BLAST
Blast:WD40	354	397	2e-7	BLAST
Pfam:eIF2A	496	691	1.3e-68	PFAM
low complexity region	700	719	N/A	INTRINSIC
low complexity region	784	797	N/A	INTRINSIC

Coding Region Coverage

1x: 100.0%
3x: 99.9%
10x: 99.6%
20x: 98.7%

Validation Efficiency

100% (41/41)

MGI Phenotype

PHENOTYPE: Homozygous embryos die prenatally prior to the blastocyst stage. [provided by MGI curators]

Allele List at MGI

Other mutations in this stock

Total: 41 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Adamts19	T	A	18: 58,890,425	C297*	probably null	Het
Adamts3	T	C	5: 89,707,122		probably benign	Het
Best2	T	A	8: 85,009,313	M331L	probably benign	Het
Cachd1	T	A	4: 100,994,829	S1207R	probably damaging	Het
Cacna2d3	G	T	14: 29,333,778	N298K	probably damaging	Het
Cyp2j12	T	C	4: 96,121,513	Y203C	probably damaging	Het
Dnah8	T	C	17: 30,762,642	I3046T	possibly damaging	Het
Ergic2	A	G	6: 148,181,895	V355A	probably benign	Het
F13a1	C	T	13: 36,877,779	G670D	probably damaging	Het
Gfpt1	T	A	6: 87,054,623	D82E	probably benign	Het
Ggnbp2	G	A	11: 84,840,076	R376C	probably damaging	Het
Gm30302	T	C	13: 49,787,512	N241D	probably benign	Het
Grn	T	C	11: 102,436,385	F191L	unknown	Het
Ighv1-16	C	T	12: 114,665,999	G56D	probably benign	Het
Jrkl	T	C	9: 13,244,321	D445G	probably benign	Het
Loxl3	A	G	6: 83,035,758	T93A	probably damaging	Het
Lrp1b	C	T	2: 41,112,706	A2094T		Het
Lrriq3	T	A	3: 155,187,938	D425E	probably damaging	Het
Majin	T	C	19: 6,211,620	V55A	possibly damaging	Het
Mapk8ip3	A	T	17: 24,899,518	V1192E	probably damaging	Het
Mdga1	T	C	17: 29,931,321	S106G	unknown	Het
Mtch2	C	T	2: 90,854,930	R135*	probably null	Het
Naip1	T	C	13: 100,426,320	N779S	possibly damaging	Het
Nfia	T	C	4: 98,063,145	V403A	possibly damaging	Het
Npas4	C	A	19: 4,988,528	D121Y	probably damaging	Het
Rab3gap1	C	T	1: 127,909,893	R231W	probably damaging	Het
Rangap1	C	G	15: 81,726,069		probably benign	Het
Rgs5	T	A	1: 169,690,421	F75I	probably benign	Het
Rnf19a	T	C	15: 36,265,306	D215G	possibly damaging	Het
Rwdd4a	A	T	8: 47,547,841		probably benign	Het
Setd5	G	A	6: 113,111,508	R199H	probably damaging	Het
Spef2	T	C	15: 9,599,747	Q2004R	unknown	Het
Syne1	T	C	10: 5,420,473	K236E	probably benign	Het
Tas2r104	A	G	6: 131,685,669	F26L	possibly damaging	Het
Tbc1d32	T	A	10: 56,087,559	E954D	probably benign	Het
Tenm2	A	C	11: 36,027,195	S1914A	possibly damaging	Het
Tln2	G	T	9: 67,330,552	Y32*	probably null	Het
Tnc	C	T	4: 63,993,059	R1425H	probably damaging	Het
Unc13b	T	C	4: 43,174,724	C1851R	unknown	Het
Wapl	T	A	14: 34,692,202	D340E	probably benign	Het
Zfp74	T	C	7: 29,934,810	E491G	probably damaging	Het

Other mutations in Eif3b

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01087:Eif3b	APN	5	140441107	missense	probably damaging	0.99
IGL01295:Eif3b	APN	5	140441740	missense	possibly damaging	0.77
IGL01539:Eif3b	APN	5	140430253	splice site	probably benign
IGL01897:Eif3b	APN	5	140425447	missense	possibly damaging	0.69
IGL02166:Eif3b	APN	5	140439950	missense	possibly damaging	0.72
IGL02169:Eif3b	APN	5	140430081	missense	possibly damaging	0.92
hangman	UTSW	5	140419837	splice site	probably benign
hemp	UTSW	5	140425322	missense	probably damaging	0.97
R0783:Eif3b	UTSW	5	140419837	splice site	probably benign
R1727:Eif3b	UTSW	5	140425322	missense	probably damaging	0.97
R1909:Eif3b	UTSW	5	140432937	missense	probably damaging	1.00
R2062:Eif3b	UTSW	5	140426453	missense	probably damaging	1.00
R2258:Eif3b	UTSW	5	140427503	missense	possibly damaging	0.79
R4738:Eif3b	UTSW	5	140430078	missense	probably benign	0.01
R4752:Eif3b	UTSW	5	140441101	missense	probably benign	0.08
R4774:Eif3b	UTSW	5	140419500	missense	probably benign
R5342:Eif3b	UTSW	5	140425280	missense	probably damaging	1.00
R5790:Eif3b	UTSW	5	140442131	missense	probably benign	0.42
R6286:Eif3b	UTSW	5	140419811	missense	probably damaging	0.99
R7027:Eif3b	UTSW	5	140425288	missense	probably damaging	0.99
R7293:Eif3b	UTSW	5	140419428	missense	probably benign
R7561:Eif3b	UTSW	5	140442354	missense	probably benign	0.04
R7585:Eif3b	UTSW	5	140440002	missense	probably damaging	1.00
R8170:Eif3b	UTSW	5	140426775	splice site	probably null
R8853:Eif3b	UTSW	5	140440019	missense	probably damaging	0.99
R8958:Eif3b	UTSW	5	140425439	missense	probably benign	0.08
R9286:Eif3b	UTSW	5	140425309	missense	probably benign
Z1177:Eif3b	UTSW	5	140430128	missense	probably damaging	1.00

Predicted Primers

PCR Primer
(F):5'- TCTGTTCATGTAGAGAGAAAGGC -3'
(R):5'- AATGGGCACTGCTGAGTTCC -3'

Sequencing Primer
(F):5'- GGCCTCAGTGTACAGACAG -3'
(R):5'- AGTTCCACCGCTGTGTG -3'

Posted On

2021-07-15