Mutagenetix > Incidental Mutation

Incidental Mutation 'R8877:Psg26'

676635

Institutional Source

Beutler Lab

Gene Symbol

Psg26

Ensembl Gene

ENSMUSG00000070799

Gene Name

pregnancy-specific beta-1-glycoprotein 26

Synonyms

EG574429, cea14

MMRRC Submission

068745-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.048) question?

Stock #

R8877 (G1)

Quality Score

225.009

Status

Validated

Chromosome

Chromosomal Location

18208507-18218102 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

C to T at 18217865 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Valine to Isoleucine at position 18 (V18I)

Ref Sequence

ENSEMBL: ENSMUSP00000092392 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000094798]

AlphaFold

Q4KL65

Predicted Effect

probably benign
Transcript: ENSMUST00000094798
AA Change: V18I

PolyPhen 2 Score 0.006 (Sensitivity: 0.97; Specificity: 0.75)

SMART Domains

Protein: ENSMUSP00000092392
Gene: ENSMUSG00000070799
AA Change: V18I

Domain	Start	End	E-Value	Type
IG	40	141	4.93e-3	SMART
IG	160	261	2.39e-1	SMART
IG	280	379	6.07e-3	SMART
IGc2	397	461	5.48e-10	SMART

Coding Region Coverage

1x: 100.0%
3x: 99.9%
10x: 99.6%
20x: 98.6%

Validation Efficiency

100% (58/58)

Allele List at MGI

Other mutations in this stock

Total: 57 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
2900092C05Rik	T	A	7: 12,288,704 (GRCm39)		probably null	Het
Acp2	G	A	2: 91,036,129 (GRCm39)	R109H	probably damaging	Het
Adamts8	T	C	9: 30,862,688 (GRCm39)	S298P	probably damaging	Het
Anxa7	A	G	14: 20,517,548 (GRCm39)	V157A	probably benign	Het
Arid3b	T	C	9: 57,740,904 (GRCm39)	K181E	probably damaging	Het
Armt1	A	G	10: 4,400,864 (GRCm39)	T204A	possibly damaging	Het
Brip1	A	C	11: 86,043,532 (GRCm39)	V344G	possibly damaging	Het
Ccdc40	C	T	11: 119,153,992 (GRCm39)	S1088L	probably damaging	Het
Ccdc93	A	T	1: 121,403,867 (GRCm39)	H332L	probably benign	Het
Celsr3	A	G	9: 108,706,877 (GRCm39)	D1120G	probably damaging	Het
Cep104	T	A	4: 154,077,985 (GRCm39)	I631N	probably damaging	Het
Col17a1	C	T	19: 47,637,197 (GRCm39)	A1354T	unknown	Het
Cpa2	T	C	6: 30,541,692 (GRCm39)	L10P	probably damaging	Het
Creg2	G	T	1: 39,689,861 (GRCm39)	T83K	probably benign	Het
Ddit3	T	C	10: 127,131,884 (GRCm39)	I144T	probably damaging	Het
Dmxl1	A	G	18: 50,011,292 (GRCm39)	I1150V	possibly damaging	Het
Eprs1	C	T	1: 185,148,071 (GRCm39)	R1278*	probably null	Het
Esco1	A	G	18: 10,575,017 (GRCm39)	V685A	probably damaging	Het
Gid8	C	T	2: 180,358,710 (GRCm39)	A125V	probably damaging	Het
Gin1	A	G	1: 97,710,941 (GRCm39)	D208G	possibly damaging	Het
Gja10	G	A	4: 32,602,441 (GRCm39)		probably benign	Het
Grin2d	T	C	7: 45,503,699 (GRCm39)	I679V	probably damaging	Het
Gsto2	C	A	19: 47,873,176 (GRCm39)	R184S	probably damaging	Het
Hira	T	A	16: 18,770,854 (GRCm39)	H830Q	probably benign	Het
Hmcn1	G	A	1: 150,514,659 (GRCm39)	T3571I	probably benign	Het
Khnyn	T	C	14: 56,131,782 (GRCm39)	V568A	possibly damaging	Het
Kif13a	T	A	13: 46,954,921 (GRCm39)		probably null	Het
Larp4b	T	C	13: 9,193,835 (GRCm39)	V161A	probably benign	Het
Larp6	T	A	9: 60,644,850 (GRCm39)	M330K	probably benign	Het
Lhfpl6	A	G	3: 52,950,974 (GRCm39)	R83G	possibly damaging	Het
Mavs	A	G	2: 131,087,489 (GRCm39)	N329S	possibly damaging	Het
Mep1b	T	A	18: 21,221,630 (GRCm39)	N193K	possibly damaging	Het
Msantd5f6	T	A	4: 73,322,468 (GRCm39)	R12*	probably null	Het
Mttp	A	T	3: 137,818,317 (GRCm39)	D380E	probably damaging	Het
Nbeal2	G	A	9: 110,459,311 (GRCm39)	T1939I	probably damaging	Het
Nsun7	A	T	5: 66,453,294 (GRCm39)	R670*	probably null	Het
Obsl1	G	A	1: 75,473,167 (GRCm39)	R1019*	probably null	Het
Or10ak12	A	G	4: 118,666,482 (GRCm39)	V193A	probably damaging	Het
Or5w11	T	C	2: 87,459,212 (GRCm39)	M19T	probably damaging	Het
Phc3	C	T	3: 30,968,271 (GRCm39)	V922I	probably damaging	Het
Pip5kl1	T	C	2: 32,468,951 (GRCm39)	V190A	possibly damaging	Het
Plekhg2	G	T	7: 28,060,278 (GRCm39)	T993N	possibly damaging	Het
Slc11a1	A	G	1: 74,419,424 (GRCm39)	Y187C	probably damaging	Het
Smarcd3	A	G	5: 24,798,990 (GRCm39)	S323P	possibly damaging	Het
Spen	G	T	4: 141,199,137 (GRCm39)	Y3163*	probably null	Het
Stx4a	T	A	7: 127,447,633 (GRCm39)	V259D	probably damaging	Het
Synj2	T	C	17: 6,087,941 (GRCm39)	S1331P	probably damaging	Het
Tmprss11c	G	A	5: 86,385,540 (GRCm39)	Q311*	probably null	Het
Tpo	T	A	12: 30,142,738 (GRCm39)	N662I	probably damaging	Het
Trav13d-4	C	A	14: 53,995,350 (GRCm39)	D101E	probably damaging	Het
Trbv14	G	A	6: 41,112,292 (GRCm39)	A30T	probably benign	Het
Unc80	T	C	1: 66,567,144 (GRCm39)	S917P	possibly damaging	Het
Zc3h6	T	A	2: 128,856,319 (GRCm39)	C466*	probably null	Het
Zfp462	T	C	4: 55,011,097 (GRCm39)	V1021A	probably damaging	Het
Zfp51	T	C	17: 21,682,017 (GRCm39)	M72T	probably damaging	Het
Zfp704	C	T	3: 9,674,416 (GRCm39)	E122K	unknown	Het
Zfyve26	T	C	12: 79,334,152 (GRCm39)	K289E	probably benign	Het

Other mutations in Psg26

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01010:Psg26	APN	7	18,212,255 (GRCm39)	missense	possibly damaging	0.83
IGL01383:Psg26	APN	7	18,214,179 (GRCm39)	missense	possibly damaging	0.90
IGL01453:Psg26	APN	7	18,213,999 (GRCm39)	missense	possibly damaging	0.91
IGL01603:Psg26	APN	7	18,209,028 (GRCm39)	missense	probably damaging	0.98
IGL02201:Psg26	APN	7	18,214,071 (GRCm39)	missense	probably benign	0.04
IGL02468:Psg26	APN	7	18,212,387 (GRCm39)	missense	probably damaging	0.96
IGL02648:Psg26	APN	7	18,216,691 (GRCm39)	missense	probably benign	0.05
IGL02812:Psg26	APN	7	18,209,080 (GRCm39)	missense	probably benign	0.00
R0226:Psg26	UTSW	7	18,217,883 (GRCm39)	missense	possibly damaging	0.81
R0352:Psg26	UTSW	7	18,209,181 (GRCm39)	missense	probably benign	0.00
R0369:Psg26	UTSW	7	18,216,481 (GRCm39)	nonsense	probably null
R0718:Psg26	UTSW	7	18,212,212 (GRCm39)	missense	probably benign	0.18
R0718:Psg26	UTSW	7	18,209,160 (GRCm39)	missense	probably benign	0.23
R1710:Psg26	UTSW	7	18,213,966 (GRCm39)	missense	probably damaging	0.99
R1899:Psg26	UTSW	7	18,212,350 (GRCm39)	missense	probably benign	0.01
R1958:Psg26	UTSW	7	18,212,264 (GRCm39)	missense	probably benign	0.04
R2102:Psg26	UTSW	7	18,209,067 (GRCm39)	missense	probably damaging	1.00
R3766:Psg26	UTSW	7	18,208,996 (GRCm39)	missense	probably benign
R4544:Psg26	UTSW	7	18,212,464 (GRCm39)	missense	probably damaging	1.00
R4977:Psg26	UTSW	7	18,209,235 (GRCm39)	missense	probably benign	0.11
R5000:Psg26	UTSW	7	18,214,057 (GRCm39)	missense	possibly damaging	0.95
R5376:Psg26	UTSW	7	18,214,030 (GRCm39)	missense	probably benign
R5416:Psg26	UTSW	7	18,216,525 (GRCm39)	missense	probably benign
R5435:Psg26	UTSW	7	18,212,398 (GRCm39)	missense	possibly damaging	0.60
R6000:Psg26	UTSW	7	18,216,617 (GRCm39)	nonsense	probably null
R6285:Psg26	UTSW	7	18,216,753 (GRCm39)	missense	probably benign
R7062:Psg26	UTSW	7	18,216,521 (GRCm39)	missense	probably damaging	1.00
R7083:Psg26	UTSW	7	18,213,934 (GRCm39)	nonsense	probably null
R7513:Psg26	UTSW	7	18,209,225 (GRCm39)	missense	probably benign	0.03
R7817:Psg26	UTSW	7	18,216,572 (GRCm39)	missense	not run
R7857:Psg26	UTSW	7	18,212,215 (GRCm39)	missense	possibly damaging	0.71
R7905:Psg26	UTSW	7	18,209,242 (GRCm39)	missense	probably benign	0.00
R8047:Psg26	UTSW	7	18,212,474 (GRCm39)	missense	possibly damaging	0.50
R8789:Psg26	UTSW	7	18,216,494 (GRCm39)	missense	probably damaging	1.00
R9012:Psg26	UTSW	7	18,216,596 (GRCm39)	missense	probably benign	0.19
R9203:Psg26	UTSW	7	18,212,382 (GRCm39)	missense	probably damaging	0.98
R9327:Psg26	UTSW	7	18,216,480 (GRCm39)	missense	probably damaging	1.00
R9547:Psg26	UTSW	7	18,214,087 (GRCm39)	missense	probably benign	0.00
Z1177:Psg26	UTSW	7	18,214,216 (GRCm39)	missense	probably benign	0.02

Predicted Primers

PCR Primer
(F):5'- CAAAGTTTCCTGCTGCTGAGC -3'
(R):5'- TGGAAGTGACTGAGCAGTGTC -3'

Sequencing Primer
(F):5'- GCTGCTGAGCCTCTGTC -3'
(R):5'- GCCCATAAAATTCTGTGAAGTTCTCC -3'

Posted On

2021-07-15