Mutagenetix > Incidental Mutation

Incidental Mutation 'R8890:C1ql3'

677609

Institutional Source

Beutler Lab

Gene Symbol

C1ql3

Ensembl Gene

ENSMUSG00000049630

Gene Name

C1q-like 3

Synonyms

1110065A22Rik, K100

MMRRC Submission

068694-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.160) question?

Stock #

R8890 (G1)

Quality Score

225.009

Status

Validated

Chromosome

Chromosomal Location

13008268-13016617 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

T to A at 13015184 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Threonine to Serine at position 159 (T159S)

Ref Sequence

ENSEMBL: ENSMUSP00000056188 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000061545]

AlphaFold

Q9ESN4

Predicted Effect

SMART Domains

Protein: ENSMUSP00000056188
Gene: ENSMUSG00000049630
AA Change: T159S

Domain	Start	End	E-Value	Type
signal peptide	1	20	N/A	INTRINSIC
Pfam:Collagen	59	116	2.6e-11	PFAM
C1Q	120	255	2.92e-35	SMART

Meta Mutation Damage Score

0.0783

Coding Region Coverage

1x: 100.0%
3x: 99.9%
10x: 99.5%
20x: 98.4%

Validation Efficiency

100% (59/59)

MGI Phenotype

PHENOTYPE: Mice homozygous for a knock-out allele exhibit impaired coordination, hyperactivity, decreased anxiety-related response, impaired contextual conditioning behavior, impaired CPP, impaired conditioned taste aversion and reduced density of excitatory synapses. [provided by MGI curators]

Allele List at MGI

Other mutations in this stock

Total: 59 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
4930567H17Rik	G	A	X: 69,437,994 (GRCm39)	R100W	possibly damaging	Het
Acrv1	A	T	9: 36,604,608 (GRCm39)	M1L	probably benign	Het
Adam23	G	A	1: 63,624,524 (GRCm39)	G784D	possibly damaging	Het
Astl	A	T	2: 127,198,479 (GRCm39)	M365L	probably benign	Het
Ccser2	T	G	14: 36,601,352 (GRCm39)	D344A	probably damaging	Het
Cox11	A	C	11: 90,534,599 (GRCm39)	I214L	probably damaging	Het
Cramp1	C	T	17: 25,202,114 (GRCm39)	G456D	probably damaging	Het
Ctsq	T	A	13: 61,185,502 (GRCm39)	Y213F	probably damaging	Het
Cyp2j5	T	A	4: 96,522,555 (GRCm39)	I340F	probably damaging	Het
Efcab6	A	G	15: 83,829,349 (GRCm39)	F664L	probably damaging	Het
Eif3j2	A	G	18: 43,610,276 (GRCm39)	L179P	probably benign	Het
Fhad1	A	T	4: 141,656,902 (GRCm39)	M84K	probably benign	Het
Gabbr1	T	C	17: 37,358,436 (GRCm39)	V58A	probably benign	Het
Gabra1	T	A	11: 42,024,553 (GRCm39)	Y374F	probably benign	Het
Glt28d2	A	T	3: 85,779,359 (GRCm39)	V38D	possibly damaging	Het
Grid2	A	T	6: 63,233,923 (GRCm39)	H28L	probably benign	Het
Hat1	G	A	2: 71,269,137 (GRCm39)	R355K	probably damaging	Het
Hivep3	T	C	4: 119,953,657 (GRCm39)	Y658H	possibly damaging	Het
Hsh2d	T	C	8: 72,951,690 (GRCm39)	F108S	probably damaging	Het
Il17rc	G	T	6: 113,456,031 (GRCm39)	C292F	probably damaging	Het
Il31ra	T	C	13: 112,660,861 (GRCm39)	D576G	possibly damaging	Het
Iqsec3	T	C	6: 121,389,515 (GRCm39)	D652G	probably damaging	Het
Kdm5a	T	A	6: 120,366,624 (GRCm39)	S420R	probably damaging	Het
Klhdc7b	A	G	15: 89,272,888 (GRCm39)	T599A	probably benign	Het
Lrrc8c	A	T	5: 105,754,954 (GRCm39)	E243V	probably damaging	Het
Mecom	A	G	3: 30,006,882 (GRCm39)	S714P	probably damaging	Het
Mindy4	T	C	6: 55,255,223 (GRCm39)	L567P	probably benign	Het
Mipep	G	T	14: 61,109,506 (GRCm39)	A628S	probably damaging	Het
Mmp1a	TG	TGG	9: 7,465,083 (GRCm38)		probably null	Het
Mterf3	C	T	13: 67,064,676 (GRCm39)		probably null	Het
Myh15	C	A	16: 48,959,130 (GRCm39)	L1001I	probably damaging	Het
Myom3	G	A	4: 135,541,565 (GRCm39)	M1385I	probably benign	Het
Nbea	T	C	3: 55,926,784 (GRCm39)		probably benign	Het
Nphs1	C	T	7: 30,162,080 (GRCm39)	R270W	probably damaging	Het
Nwd1	T	A	8: 73,438,484 (GRCm39)	S1552T	probably benign	Het
Or10ag60	A	T	2: 87,438,412 (GRCm39)	I227F	probably damaging	Het
Or10j5	G	A	1: 172,785,045 (GRCm39)	V228M	probably benign	Het
Or52ae9	G	T	7: 103,389,675 (GRCm39)	F257L	probably damaging	Het
Or52r1	A	T	7: 102,536,699 (GRCm39)	Y220*	probably null	Het
Pcdh7	A	T	5: 57,876,717 (GRCm39)	I91F	probably damaging	Het
Pheta2	G	T	15: 82,227,618 (GRCm39)	V46F	probably damaging	Het
Piezo1	T	C	8: 123,216,330 (GRCm39)	R1394G		Het
Pramel28	G	T	4: 143,691,494 (GRCm39)	Q410K	probably benign	Het
Psmd1	G	A	1: 86,012,914 (GRCm39)	R361Q	probably damaging	Het
Ralb	G	A	1: 119,411,246 (GRCm39)	T31M	probably damaging	Het
Rassf4	T	A	6: 116,617,305 (GRCm39)	K233N	probably damaging	Het
Rif1	T	C	2: 51,988,875 (GRCm39)	F756S	probably damaging	Het
Rpgrip1	G	A	14: 52,382,501 (GRCm39)	D556N	possibly damaging	Het
Scai	T	C	2: 39,040,400 (GRCm39)		probably benign	Het
Scfd1	A	G	12: 51,474,678 (GRCm39)	T478A	probably benign	Het
Spag17	T	A	3: 99,911,994 (GRCm39)	I288N	possibly damaging	Het
Sult1e1	C	T	5: 87,727,719 (GRCm39)	V188I	probably benign	Het
Tmco1	A	G	1: 167,143,814 (GRCm39)	R82G		Het
Tmem109	T	C	19: 10,849,235 (GRCm39)	S207G	probably benign	Het
Vmn2r115	A	G	17: 23,578,497 (GRCm39)	T657A	probably damaging	Het
Whamm	A	G	7: 81,243,640 (GRCm39)	T621A	probably benign	Het
Zbtb40	A	G	4: 136,725,897 (GRCm39)	L554P	probably damaging	Het
Zfp131	A	T	13: 120,244,338 (GRCm39)	M114K	probably damaging	Het
Zfp532	C	T	18: 65,757,404 (GRCm39)	P446S	probably damaging	Het

Other mutations in C1ql3

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
R1489:C1ql3	UTSW	2	13,015,453 (GRCm39)	missense	possibly damaging	0.89
R2253:C1ql3	UTSW	2	13,015,130 (GRCm39)	missense	possibly damaging	0.55
R5386:C1ql3	UTSW	2	13,009,169 (GRCm39)	missense	probably damaging	1.00
R7343:C1ql3	UTSW	2	13,015,589 (GRCm39)	missense	probably benign	0.00
R7425:C1ql3	UTSW	2	13,015,229 (GRCm39)	missense	possibly damaging	0.90
R7480:C1ql3	UTSW	2	13,015,150 (GRCm39)	missense	probably damaging	0.98
R7636:C1ql3	UTSW	2	13,015,621 (GRCm39)	missense	probably benign	0.01
R7740:C1ql3	UTSW	2	13,015,483 (GRCm39)	missense	possibly damaging	0.82
R8780:C1ql3	UTSW	2	13,015,567 (GRCm39)	missense	probably benign	0.00
R9072:C1ql3	UTSW	2	13,015,198 (GRCm39)	missense	probably damaging	1.00
R9073:C1ql3	UTSW	2	13,015,198 (GRCm39)	missense	probably damaging	1.00
R9803:C1ql3	UTSW	2	13,009,200 (GRCm39)	missense	probably damaging	1.00

Predicted Primers

PCR Primer
(F):5'- TTTCCAGCATGTCACAGAGTCC -3'
(R):5'- TTTCATCCAGGGTCCCAAAG -3'

Sequencing Primer
(F):5'- ATGTCACAGAGTCCCCCTCG -3'
(R):5'- CAGGGTCCCAAAGGCGAG -3'

Posted On

2021-08-02