Mutagenetix > Incidental Mutation

Incidental Mutation 'R8891:Lpo'

677704

Institutional Source

Beutler Lab

Gene Symbol

Lpo

Ensembl Gene

ENSMUSG00000009356

Gene Name

lactoperoxidase

Synonyms

5830499B15Rik

MMRRC Submission

068753-MU

Accession Numbers

Essential gene?

Non essential (E-score: 0.000) question?

Stock #

R8891 (G1)

Quality Score

225.009

Status

Not validated

Chromosome

Chromosomal Location

87697254-87716750 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

T to A at 87697848 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Glutamic Acid to Valine at position 653 (E653V)

Ref Sequence

ENSEMBL: ENSMUSP00000099466 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000020779] [ENSMUST00000103177] [ENSMUST00000121303] [ENSMUST00000146650]

AlphaFold

Q5SW46

Predicted Effect

probably benign
Transcript: ENSMUST00000020779

SMART Domains

Protein: ENSMUSP00000020779
Gene: ENSMUSG00000009350

Domain	Start	End	E-Value	Type
signal peptide	1	22	N/A	INTRINSIC
Pfam:An_peroxidase	147	692	4.2e-183	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000103177
AA Change: E653V

PolyPhen 2 Score 0.079 (Sensitivity: 0.93; Specificity: 0.85)

SMART Domains

Protein: ENSMUSP00000099466
Gene: ENSMUSG00000009356
AA Change: E653V

Domain	Start	End	E-Value	Type
signal peptide	1	23	N/A	INTRINSIC
Pfam:An_peroxidase	136	682	1.8e-180	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000121303

SMART Domains

Protein: ENSMUSP00000112837
Gene: ENSMUSG00000009350

Domain	Start	End	E-Value	Type
signal peptide	1	22	N/A	INTRINSIC
Pfam:An_peroxidase	147	692	4.2e-183	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000146650

SMART Domains

Protein: ENSMUSP00000128484
Gene: ENSMUSG00000009350

Domain	Start	End	E-Value	Type
Pfam:An_peroxidase	1	112	2.4e-32	PFAM

Coding Region Coverage

1x: 100.0%
3x: 100.0%
10x: 99.8%
20x: 99.4%

Validation Efficiency

MGI Phenotype

FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes a member of the peroxidase family of proteins. The encoded preproprotein is proteolytically processed to generate the mature enzyme. Following its secretion from salivary, mammary, and other mucosal glands, this enzyme catalyzes the generation of the antimicrobial substance hypothiocyanous acid. This gene is present in a gene cluster on chromosome 17. Alternative splicing results in multiple transcript variants, at least one of which encodes a preproprotein that is proteolytically processed. [provided by RefSeq, Jan 2016]

Allele List at MGI

Other mutations in this stock

Total: 62 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
1110002E22Rik	A	T	3: 137,772,520 (GRCm39)	K570*	probably null	Het
Abi1	T	C	2: 22,861,262 (GRCm39)	I99V	probably damaging	Het
Abtb3	G	A	10: 85,223,958 (GRCm39)	G256R	unknown	Het
Adgrg7	T	A	16: 56,572,762 (GRCm39)	E351D	probably benign	Het
Ankrd34c	T	G	9: 89,612,143 (GRCm39)	K66T	probably damaging	Het
Asap2	C	T	12: 21,162,144 (GRCm39)	R34W	probably damaging	Het
Atr	A	G	9: 95,787,813 (GRCm39)	T1469A	probably benign	Het
Ccdc168	T	C	1: 44,096,284 (GRCm39)	I1605V	probably benign	Het
Celsr1	G	T	15: 85,822,194 (GRCm39)	R1708S	probably benign	Het
Chmp2a	T	A	7: 12,767,840 (GRCm39)	E28D	probably benign	Het
Cldn24	A	T	8: 48,275,281 (GRCm39)	N35I	probably benign	Het
Coa6	G	C	8: 127,149,570 (GRCm39)		probably null	Het
Copa	C	T	1: 171,946,818 (GRCm39)	R1009C	probably damaging	Het
Crybb2	G	A	5: 113,209,913 (GRCm39)	T150M	possibly damaging	Het
Ctnnd2	A	T	15: 30,620,076 (GRCm39)	T143S	probably benign	Het
Eid3	A	G	10: 82,702,992 (GRCm39)	N151S	probably damaging	Het
Fbxo17	G	T	7: 28,434,733 (GRCm39)	V173L	possibly damaging	Het
Fmn2	CCCTCCTCTCCCTGGAATGGGAATACCTCCCCCACCTCCTCTCCCTGGAATGGGAATACCTCCCCCACCTCCTCTCCCTGGAATGGGAATATCTCCCCTACCTCCTCTCCCTGGAATGGGAATACCTCC	CCCTCCTCTCCCTGGAATGGGAATACCTCCCCCACCTCCTCTCCCTGGAATGGGAATATCTCCCCTACCTCCTCTCCCTGGAATGGGAATACCTCC	1: 174,436,769 (GRCm39)		probably benign	Het
Galntl6	T	C	8: 58,415,433 (GRCm39)	N240S	probably damaging	Het
Gck	G	T	11: 5,851,733 (GRCm39)	S445R	probably damaging	Het
Gm5114	C	A	7: 39,057,718 (GRCm39)	V634F	probably benign	Het
Gnat2	G	A	3: 108,005,634 (GRCm39)	D200N		Het
H13	A	G	2: 152,546,049 (GRCm39)	N390S	probably benign	Het
Helz	T	A	11: 107,552,842 (GRCm39)	M1206K	probably damaging	Het
Itpr3	G	A	17: 27,337,651 (GRCm39)		probably benign	Het
Kank1	G	A	19: 25,387,439 (GRCm39)	G371R	probably benign	Het
Kif13b	A	G	14: 64,982,326 (GRCm39)	T513A	probably damaging	Het
L3mbtl4	T	C	17: 68,762,781 (GRCm39)	S105P	possibly damaging	Het
Lyst	A	G	13: 13,887,435 (GRCm39)	D3088G	possibly damaging	Het
Man2b1	C	A	8: 85,811,084 (GRCm39)	H72N	probably damaging	Het
Mast3	A	T	8: 71,233,801 (GRCm39)	H981Q	probably damaging	Het
Meioc	T	A	11: 102,559,246 (GRCm39)	I56N	probably benign	Het
Mul1	A	C	4: 138,162,164 (GRCm39)	K32Q	probably benign	Het
Oas1c	C	T	5: 120,946,126 (GRCm39)	S124N	probably benign	Het
Omg	T	A	11: 79,393,829 (GRCm39)	K10*	probably null	Het
Or2a52	A	G	6: 43,144,750 (GRCm39)	I253V	probably benign	Het
Or4k52	A	T	2: 111,611,186 (GRCm39)	I174F	probably damaging	Het
Or6c88	A	G	10: 129,407,046 (GRCm39)	H174R	probably damaging	Het
Pcdhb14	T	A	18: 37,582,692 (GRCm39)	N599K	probably damaging	Het
Pcdhb18	C	A	18: 37,623,700 (GRCm39)	N343K	probably damaging	Het
Phf7	C	A	14: 30,971,613 (GRCm39)		probably benign	Het
Pramel15	C	T	4: 144,099,397 (GRCm39)	C456Y	probably damaging	Het
Qdpr	T	C	5: 45,604,982 (GRCm39)	N42S	probably damaging	Het
Rbm44	T	A	1: 91,090,136 (GRCm39)	D716E	probably benign	Het
Rprd2	A	C	3: 95,671,367 (GRCm39)	H1345Q	possibly damaging	Het
Rsf1	G	GACGGCGGCT	7: 97,229,116 (GRCm39)		probably benign	Het
Ryr2	G	A	13: 11,814,768 (GRCm39)	A668V	probably damaging	Het
Sag	T	A	1: 87,759,683 (GRCm39)	L307Q	probably damaging	Het
Sash1	G	A	10: 8,603,734 (GRCm39)	P1106L	probably damaging	Het
Sec16b	T	A	1: 157,382,409 (GRCm39)	I615N	probably damaging	Het
Sfi1	A	ATCTTCCCAAAGCCAGTGC	11: 3,103,384 (GRCm39)		probably benign	Het
Slco1b2	T	C	6: 141,628,993 (GRCm39)	V600A	probably benign	Het
Sucnr1	A	G	3: 59,994,263 (GRCm39)	T264A	probably benign	Het
Tbx3	A	G	5: 119,809,983 (GRCm39)		probably benign	Het
Tigd5	T	C	15: 75,783,069 (GRCm39)	V477A	possibly damaging	Het
Tle7	T	A	8: 110,836,763 (GRCm39)	S216R	possibly damaging	Het
Ttc17	G	A	2: 94,192,764 (GRCm39)	A89V	probably damaging	Het
Twsg1	A	G	17: 66,255,657 (GRCm39)	I39T		Het
Zfp184	T	C	13: 22,143,512 (GRCm39)	F406S	probably damaging	Het
Zfp429	A	T	13: 67,538,830 (GRCm39)	C205S	probably damaging	Het
Zfp59	T	A	7: 27,554,313 (GRCm39)	D588E	probably benign	Het
Zfp64	A	T	2: 168,797,083 (GRCm39)	M1K	probably null	Het

Other mutations in Lpo

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01483:Lpo	APN	11	87,711,964 (GRCm39)	missense	probably benign	0.43
IGL01833:Lpo	APN	11	87,698,159 (GRCm39)	missense	possibly damaging	0.81
IGL02413:Lpo	APN	11	87,697,732 (GRCm39)	missense	possibly damaging	0.87
IGL02706:Lpo	APN	11	87,708,599 (GRCm39)	missense	probably benign	0.02
IGL02865:Lpo	APN	11	87,697,803 (GRCm39)	missense	possibly damaging	0.80
IGL02939:Lpo	APN	11	87,706,004 (GRCm39)	missense	possibly damaging	0.85
R1072:Lpo	UTSW	11	87,709,260 (GRCm39)	missense	probably damaging	1.00
R1169:Lpo	UTSW	11	87,708,143 (GRCm39)	missense	possibly damaging	0.58
R1667:Lpo	UTSW	11	87,698,067 (GRCm39)	unclassified	probably benign
R1719:Lpo	UTSW	11	87,700,018 (GRCm39)	splice site	probably null
R2133:Lpo	UTSW	11	87,711,956 (GRCm39)	missense	probably benign	0.17
R2871:Lpo	UTSW	11	87,707,350 (GRCm39)	missense	possibly damaging	0.51
R2871:Lpo	UTSW	11	87,707,350 (GRCm39)	missense	possibly damaging	0.51
R4382:Lpo	UTSW	11	87,713,027 (GRCm39)	missense	probably benign	0.14
R4657:Lpo	UTSW	11	87,705,173 (GRCm39)	missense	probably damaging	1.00
R4936:Lpo	UTSW	11	87,701,166 (GRCm39)	missense	probably benign	0.02
R4969:Lpo	UTSW	11	87,697,751 (GRCm39)	missense	probably benign	0.09
R5368:Lpo	UTSW	11	87,711,895 (GRCm39)	missense	possibly damaging	0.61
R5536:Lpo	UTSW	11	87,707,389 (GRCm39)	missense	probably damaging	1.00
R6246:Lpo	UTSW	11	87,713,058 (GRCm39)	missense	unknown
R6556:Lpo	UTSW	11	87,708,589 (GRCm39)	nonsense	probably null
R6817:Lpo	UTSW	11	87,700,067 (GRCm39)	missense	probably benign
R7024:Lpo	UTSW	11	87,707,269 (GRCm39)	missense	probably damaging	1.00
R7203:Lpo	UTSW	11	87,700,077 (GRCm39)	missense	possibly damaging	0.75
R7206:Lpo	UTSW	11	87,698,249 (GRCm39)	missense	probably damaging	1.00
R8355:Lpo	UTSW	11	87,705,114 (GRCm39)	missense	probably damaging	1.00
R8455:Lpo	UTSW	11	87,705,114 (GRCm39)	missense	probably damaging	1.00
R8693:Lpo	UTSW	11	87,700,066 (GRCm39)	missense	probably benign	0.04
R8848:Lpo	UTSW	11	87,708,603 (GRCm39)	missense	probably benign	0.00
R8989:Lpo	UTSW	11	87,708,660 (GRCm39)	missense	probably benign	0.00
RF010:Lpo	UTSW	11	87,711,928 (GRCm39)	missense	probably benign	0.00

Predicted Primers

PCR Primer
(F):5'- AATGGCATCTCGGACCATGG -3'
(R):5'- CCCCAAAATTCTTCATGAGGTC -3'

Sequencing Primer
(F):5'- ATCTCGGACCATGGACATGTTCG -3'
(R):5'- CATGAGGTCTGACTCCATACC -3'

Posted On

2021-08-02