Mutagenetix > Incidental Mutation

Incidental Mutation 'R8931:Arhgef19'

680298

Institutional Source

Beutler Lab

Gene Symbol

Arhgef19

Ensembl Gene

ENSMUSG00000028919

Gene Name

Rho guanine nucleotide exchange factor 19

Synonyms

WGEF, 6430573B13Rik

MMRRC Submission

068775-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.249) question?

Stock #

R8931 (G1)

Quality Score

225.009

Status

Validated

Chromosome

Chromosomal Location

140966810-140984875 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

T to C at 140976603 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Valine to Alanine at position 455 (V455A)

Ref Sequence

ENSEMBL: ENSMUSP00000006618 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000006618] [ENSMUST00000125392] [ENSMUST00000135623] [ENSMUST00000138096] [ENSMUST00000141834] [ENSMUST00000147903]

AlphaFold

Q8BWA8

Predicted Effect

probably damaging
Transcript: ENSMUST00000006618
AA Change: V455A

PolyPhen 2 Score 0.979 (Sensitivity: 0.75; Specificity: 0.96)

SMART Domains

Protein: ENSMUSP00000006618
Gene: ENSMUSG00000028919
AA Change: V455A

Domain	Start	End	E-Value	Type
low complexity region	145	160	N/A	INTRINSIC
low complexity region	161	172	N/A	INTRINSIC
low complexity region	305	331	N/A	INTRINSIC
RhoGEF	380	559	5.51e-43	SMART
PH	593	706	8.86e-6	SMART
SH3	718	775	5.16e-10	SMART

Predicted Effect

probably benign
Transcript: ENSMUST00000125392

Predicted Effect

probably benign
Transcript: ENSMUST00000135623

SMART Domains

Protein: ENSMUSP00000119846
Gene: ENSMUSG00000028919

Domain	Start	End	E-Value	Type
low complexity region	145	160	N/A	INTRINSIC
low complexity region	161	172	N/A	INTRINSIC

Predicted Effect

probably benign
Transcript: ENSMUST00000138096

Predicted Effect

probably benign
Transcript: ENSMUST00000141834

Predicted Effect

probably benign
Transcript: ENSMUST00000147903

SMART Domains

Protein: ENSMUSP00000120088
Gene: ENSMUSG00000028919

Domain	Start	End	E-Value	Type
low complexity region	147	173	N/A	INTRINSIC

Coding Region Coverage

1x: 100.0%
3x: 99.9%
10x: 99.6%
20x: 98.8%

Validation Efficiency

100% (58/58)

MGI Phenotype

FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] Guanine nucleotide exchange factors (GEFs) such as ARHGEF19 accelerate the GTPase activity of Rho GTPases (see RHOA, MIM 165390).[supplied by OMIM, Dec 2008]

Allele List at MGI

Other mutations in this stock

Total: 61 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Acat3	G	C	17: 13,147,405 (GRCm39)	P204R	probably damaging	Het
Aldh3b1	A	G	19: 3,968,803 (GRCm39)	I250T	possibly damaging	Het
Ankrd11	C	T	8: 123,622,718 (GRCm39)	R378K	probably damaging	Het
Arap1	G	A	7: 101,057,324 (GRCm39)	R1355Q	possibly damaging	Het
BC051019	T	C	7: 109,315,286 (GRCm39)	E323G	probably damaging	Het
Bzw2	T	C	12: 36,184,943 (GRCm39)	N2S	possibly damaging	Het
Calm3	G	C	7: 16,651,398 (GRCm39)	F66L	probably damaging	Het
Carmil1	T	A	13: 24,338,704 (GRCm39)	T191S	probably benign	Het
Cemip2	T	A	19: 21,770,323 (GRCm39)	S104T	probably benign	Het
Cep170	A	T	1: 176,597,377 (GRCm39)	C389S	probably benign	Het
Clhc1	C	T	11: 29,510,533 (GRCm39)	Q195*	probably null	Het
Cttnbp2	A	G	6: 18,434,808 (GRCm39)	L350P	probably benign	Het
Cyp7a1	T	C	4: 6,271,238 (GRCm39)	E306G	possibly damaging	Het
Ddx25	T	C	9: 35,465,864 (GRCm39)	N119S	possibly damaging	Het
Ephx2	G	T	14: 66,322,441 (GRCm39)		probably benign	Het
Ern2	C	T	7: 121,769,363 (GRCm39)	A888T	probably benign	Het
Fbln2	A	T	6: 91,246,072 (GRCm39)	I973F	probably damaging	Het
Fbn1	T	C	2: 125,202,095 (GRCm39)	I1259M	probably damaging	Het
Glis1	A	G	4: 107,421,060 (GRCm39)	H92R	probably benign	Het
Gm13283	A	C	4: 88,679,516 (GRCm39)	D169A	probably benign	Het
Gpr61	A	G	3: 108,057,470 (GRCm39)	L397P	probably benign	Het
H4c11	T	A	13: 21,919,369 (GRCm39)	I35N	probably damaging	Het
Hip1	A	T	5: 135,460,297 (GRCm39)		probably benign	Het
Hmgcs2	C	T	3: 98,203,557 (GRCm39)	A222V	probably damaging	Het
Ifna2	G	A	4: 88,601,712 (GRCm39)	T102I	probably benign	Het
Kat6b	T	C	14: 21,674,995 (GRCm39)	S387P	probably damaging	Het
Ldlr	G	A	9: 21,643,108 (GRCm39)	V45M	probably damaging	Het
Mc3r	A	T	2: 172,091,515 (GRCm39)	I246F	possibly damaging	Het
Mug1	G	C	6: 121,861,296 (GRCm39)	A1306P	probably benign	Het
Myo15a	A	G	11: 60,368,020 (GRCm39)	E260G	probably benign	Het
Naa16	A	G	14: 79,582,395 (GRCm39)	Y565H	probably damaging	Het
Ndufaf7	A	G	17: 79,244,950 (GRCm39)	Y23C	possibly damaging	Het
Nop58	G	A	1: 59,731,549 (GRCm39)		probably null	Het
Or6c33	A	T	10: 129,853,769 (GRCm39)	T180S	possibly damaging	Het
Or6c88	A	T	10: 129,406,550 (GRCm39)	T9S	probably benign	Het
Or7g19	T	A	9: 18,855,920 (GRCm39)		probably benign	Het
Pcdh8	G	A	14: 80,006,971 (GRCm39)	Q531*	probably null	Het
Pik3c2g	A	G	6: 139,821,093 (GRCm39)	T297A	probably benign	Het
Poc1b	T	C	10: 99,028,861 (GRCm39)		probably null	Het
Prb1c	G	A	6: 132,338,897 (GRCm39)	P107L		Het
Prokr2	A	G	2: 132,215,996 (GRCm39)	V155A	possibly damaging	Het
Rce1	C	T	19: 4,674,094 (GRCm39)		probably benign	Het
Rnf148	A	T	6: 23,654,704 (GRCm39)	N97K	possibly damaging	Het
Setbp1	A	G	18: 78,899,723 (GRCm39)	S1315P	probably benign	Het
Sgcz	A	G	8: 38,107,140 (GRCm39)	V124A	probably damaging	Het
Slc25a2	C	A	18: 37,771,089 (GRCm39)	G147C	probably damaging	Het
Slc28a2b	C	A	2: 122,348,983 (GRCm39)	P303Q		Het
Sod2	T	C	17: 13,227,193 (GRCm39)	L49P	probably damaging	Het
Tbc1d12	T	C	19: 38,854,098 (GRCm39)	V260A	probably benign	Het
Tcte2	C	A	17: 13,933,410 (GRCm39)		probably benign	Het
Tenm3	T	C	8: 48,688,637 (GRCm39)	T2317A	probably damaging	Het
Tfcp2	T	C	15: 100,402,298 (GRCm39)	I500V	possibly damaging	Het
Trav14-3	C	A	14: 54,001,112 (GRCm39)	Q108K	probably damaging	Het
Trbv14	T	C	6: 41,112,364 (GRCm39)	Y54H	probably damaging	Het
Trpm3	T	A	19: 22,744,034 (GRCm39)	V337E	probably damaging	Het
Tsbp1	T	C	17: 34,659,328 (GRCm39)		probably benign	Het
Uox	A	T	3: 146,318,047 (GRCm39)	I14F	probably damaging	Het
Wdfy3	A	G	5: 102,065,421 (GRCm39)	V1249A	probably benign	Het
Zfp511	T	C	7: 139,617,194 (GRCm39)	Y97H	probably damaging	Het
Zfp536	G	T	7: 37,268,721 (GRCm39)	Q232K	probably benign	Het
Zng1	T	G	19: 24,932,780 (GRCm39)	K84N	probably damaging	Het

Other mutations in Arhgef19

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00958:Arhgef19	APN	4	140,976,294 (GRCm39)	unclassified	probably benign
IGL02037:Arhgef19	APN	4	140,973,707 (GRCm39)	missense	probably damaging	0.99
IGL03049:Arhgef19	APN	4	140,981,627 (GRCm39)	missense	probably damaging	0.98
IGL03071:Arhgef19	APN	4	140,976,313 (GRCm39)	missense	possibly damaging	0.88
IGL03098:Arhgef19	UTSW	4	140,974,879 (GRCm39)	missense	possibly damaging	0.85
R0271:Arhgef19	UTSW	4	140,977,918 (GRCm39)	missense	probably benign	0.00
R0319:Arhgef19	UTSW	4	140,983,710 (GRCm39)	missense	possibly damaging	0.63
R1572:Arhgef19	UTSW	4	140,982,065 (GRCm39)	missense	probably benign	0.10
R1633:Arhgef19	UTSW	4	140,965,871 (GRCm39)	unclassified	probably benign
R1735:Arhgef19	UTSW	4	140,976,929 (GRCm39)	missense	possibly damaging	0.55
R1752:Arhgef19	UTSW	4	140,978,354 (GRCm39)	missense	probably benign	0.27
R1823:Arhgef19	UTSW	4	140,976,457 (GRCm39)	missense	probably benign	0.01
R1889:Arhgef19	UTSW	4	140,976,624 (GRCm39)	missense	probably damaging	1.00
R2138:Arhgef19	UTSW	4	140,978,111 (GRCm39)	missense	probably damaging	1.00
R2280:Arhgef19	UTSW	4	140,973,827 (GRCm39)	missense	probably benign	0.14
R3430:Arhgef19	UTSW	4	140,984,111 (GRCm39)	missense	probably benign	0.03
R3954:Arhgef19	UTSW	4	140,983,645 (GRCm39)	missense	probably damaging	1.00
R4158:Arhgef19	UTSW	4	140,973,660 (GRCm39)	missense	possibly damaging	0.50
R4160:Arhgef19	UTSW	4	140,973,660 (GRCm39)	missense	possibly damaging	0.50
R4995:Arhgef19	UTSW	4	140,974,826 (GRCm39)	splice site	probably null
R5031:Arhgef19	UTSW	4	140,978,121 (GRCm39)	missense	probably damaging	0.98
R5782:Arhgef19	UTSW	4	140,983,623 (GRCm39)	missense	probably damaging	1.00
R5913:Arhgef19	UTSW	4	140,976,609 (GRCm39)	missense	probably benign	0.03
R7614:Arhgef19	UTSW	4	140,984,090 (GRCm39)	missense	possibly damaging	0.52
R8356:Arhgef19	UTSW	4	140,977,926 (GRCm39)	missense	probably benign	0.25
R8456:Arhgef19	UTSW	4	140,977,926 (GRCm39)	missense	probably benign	0.25
R8531:Arhgef19	UTSW	4	140,976,903 (GRCm39)	missense	possibly damaging	0.82
R8876:Arhgef19	UTSW	4	140,975,193 (GRCm39)	missense	probably benign	0.28
R8947:Arhgef19	UTSW	4	140,973,618 (GRCm39)	missense	possibly damaging	0.48
R9019:Arhgef19	UTSW	4	140,973,738 (GRCm39)	missense	probably benign	0.29
R9036:Arhgef19	UTSW	4	140,976,549 (GRCm39)	missense	probably damaging	1.00
R9718:Arhgef19	UTSW	4	140,976,603 (GRCm39)	missense	probably damaging	0.98

Predicted Primers

PCR Primer
(F):5'- TGGCTATTTTCAAAACTGCCCG -3'
(R):5'- GGGTCTCCCTTATTCGGAATG -3'

Sequencing Primer
(F):5'- TTTTCAAAACTGCCCGAGGTCAAG -3'
(R):5'- GGTCTCCCTTATTCGGAATGTATAAC -3'

Posted On

2021-08-31