Incidental Mutation 'R8960:Cd101'
ID 682266
Institutional Source Beutler Lab
Gene Symbol Cd101
Ensembl Gene ENSMUSG00000086564
Gene Name CD101 antigen
Synonyms LOC381460, Igsf2
Accession Numbers
Essential gene? Non essential (E-score: 0.000) question?
Stock # R8960 (G1)
Quality Score 225.009
Status Validated
Chromosome 3
Chromosomal Location 100900845-100936872 bp(-) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) A to G at 100910817 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Valine to Alanine at position 947 (V947A)
Ref Sequence ENSEMBL: ENSMUSP00000126027 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000147399] [ENSMUST00000167086]
AlphaFold A8E0Y8
Predicted Effect probably benign
Transcript: ENSMUST00000147399
AA Change: V951A

PolyPhen 2 Score 0.011 (Sensitivity: 0.96; Specificity: 0.78)
SMART Domains Protein: ENSMUSP00000116643
Gene: ENSMUSG00000086564
AA Change: V951A

DomainStartEndE-ValueType
signal peptide 1 20 N/A INTRINSIC
IG 28 143 4.96e-8 SMART
IG 153 266 4.74e-5 SMART
IG_like 274 379 2.19e-1 SMART
IG 289 395 3.25e-3 SMART
IG 417 533 4.85e-11 SMART
IG 545 659 1.52e-3 SMART
IG 680 805 3.16e-1 SMART
IG_like 827 927 2.95e-1 SMART
IG 856 955 1.04e-1 SMART
transmembrane domain 971 993 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000167086
AA Change: V947A

PolyPhen 2 Score 0.011 (Sensitivity: 0.96; Specificity: 0.78)
SMART Domains Protein: ENSMUSP00000126027
Gene: ENSMUSG00000086564
AA Change: V947A

DomainStartEndE-ValueType
IG 24 139 4.96e-8 SMART
IG 149 262 4.74e-5 SMART
IG_like 270 375 2.19e-1 SMART
IG 285 391 3.25e-3 SMART
IG 413 529 4.85e-11 SMART
IG 541 655 1.52e-3 SMART
IG 676 801 3.16e-1 SMART
IG_like 823 923 2.95e-1 SMART
IG 852 951 1.04e-1 SMART
transmembrane domain 967 989 N/A INTRINSIC
Coding Region Coverage
  • 1x: 100.0%
  • 3x: 100.0%
  • 10x: 99.9%
  • 20x: 99.7%
Validation Efficiency 100% (78/78)
MGI Phenotype PHENOTYPE: Mice homozygous for a knock-out allele exhibit reduced Gr-1+ cells. [provided by MGI curators]
Allele List at MGI
Other mutations in this stock
Total: 79 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Abcg4 G A 9: 44,186,063 (GRCm39) Q603* probably null Het
Adar A G 3: 89,647,516 (GRCm39) Y165C probably damaging Het
Afp A G 5: 90,651,500 (GRCm39) T372A probably benign Het
Asah1 T A 8: 41,800,061 (GRCm39) L184F probably damaging Het
Bltp1 A G 3: 37,067,132 (GRCm39) E3548G probably damaging Het
Bpifb2 A T 2: 153,731,046 (GRCm39) I206F possibly damaging Het
Btn1a1 C A 13: 23,648,741 (GRCm39) D31Y possibly damaging Het
C4b T A 17: 34,952,892 (GRCm39) D1110V probably damaging Het
Ccdc162 T A 10: 41,429,178 (GRCm39) D1901V probably damaging Het
Cd55b A T 1: 130,338,375 (GRCm39) S238T possibly damaging Het
Cdc25c T C 18: 34,866,329 (GRCm39) I437V possibly damaging Het
Cfap97 T C 8: 46,623,605 (GRCm39) S332P probably damaging Het
Chpf A G 1: 75,452,398 (GRCm39) L352P probably damaging Het
Cntln T A 4: 85,018,961 (GRCm39) M1217K possibly damaging Het
Cntrl A G 2: 35,052,053 (GRCm39) E1629G possibly damaging Het
Csnk1g2 T C 10: 80,474,396 (GRCm39) Y206H probably damaging Het
Cyp2c55 T A 19: 38,995,547 (GRCm39) W20R probably null Het
Dhx35 A T 2: 158,657,393 (GRCm39) H130L possibly damaging Het
Dnm1 A G 2: 32,202,741 (GRCm39) V54A probably damaging Het
Eea1 T A 10: 95,864,381 (GRCm39) S967T probably benign Het
Efcab3 A G 11: 104,820,772 (GRCm39) probably benign Het
Elf3 A T 1: 135,182,813 (GRCm39) I304N probably damaging Het
Eps8l1 G T 7: 4,481,214 (GRCm39) R672L probably damaging Het
Fam163a A T 1: 155,954,862 (GRCm39) C96* probably null Het
Fancd2 T C 6: 113,540,129 (GRCm39) probably null Het
Fbxo3 C T 2: 103,858,274 (GRCm39) L23F possibly damaging Het
Fbxw14 A G 9: 109,114,367 (GRCm39) V121A possibly damaging Het
Fgd6 T A 10: 93,880,868 (GRCm39) V574D probably benign Het
Gask1b T C 3: 79,794,293 (GRCm39) S254P probably benign Het
Gbp11 A G 5: 105,479,251 (GRCm39) F124S probably damaging Het
Grin1 A T 2: 25,195,428 (GRCm39) probably benign Het
Grm2 T G 9: 106,531,345 (GRCm39) E48A probably benign Het
H2-M10.5 T A 17: 37,084,770 (GRCm39) Y165N probably benign Het
Hoxa13 A C 6: 52,236,976 (GRCm39) S172A probably benign Het
Ifih1 T A 2: 62,442,235 (GRCm39) K376N possibly damaging Het
Insrr C A 3: 87,720,386 (GRCm39) T1008K probably damaging Het
Itih1 A G 14: 30,655,414 (GRCm39) S594P probably damaging Het
Kidins220 T C 12: 25,106,914 (GRCm39) S1365P probably benign Het
Malrd1 A T 2: 15,570,241 (GRCm39) K158* probably null Het
Man2c1 G A 9: 57,045,279 (GRCm39) G504R probably damaging Het
Mbd1 T C 18: 74,406,890 (GRCm39) probably null Het
Micall2 G A 5: 139,702,025 (GRCm39) A323V probably benign Het
Mroh9 A C 1: 162,883,196 (GRCm39) F428V probably benign Het
Myo7b T A 18: 32,127,299 (GRCm39) probably benign Het
Niban1 A T 1: 151,591,463 (GRCm39) H535L possibly damaging Het
Obscn A T 11: 58,922,438 (GRCm39) V6567E probably damaging Het
Or1e28-ps1 A C 11: 73,615,230 (GRCm39) S207A unknown Het
Or1e33 A T 11: 73,738,167 (GRCm39) C261* probably null Het
Or2g25 T A 17: 37,970,760 (GRCm39) T155S probably benign Het
Or2y1d A T 11: 49,321,543 (GRCm39) Q80L probably benign Het
Or5h25 T A 16: 58,930,555 (GRCm39) R139S probably benign Het
Or8b53 A T 9: 38,667,385 (GRCm39) I134F possibly damaging Het
Pde4dip T C 3: 97,700,464 (GRCm39) D238G probably damaging Het
Peg10 GAT GATCAT 6: 4,756,449 (GRCm39) probably benign Het
Pgbd5 T A 8: 125,111,175 (GRCm39) Y172F probably benign Het
Pkd1 A G 17: 24,795,176 (GRCm39) T2288A probably damaging Het
Ppp6r2 T A 15: 89,137,239 (GRCm39) M1K probably null Het
Rc3h1 A G 1: 160,774,164 (GRCm39) T344A probably damaging Het
Rgs5 T C 1: 169,504,461 (GRCm39) V37A possibly damaging Het
Rgs9 A G 11: 109,139,815 (GRCm39) S17P possibly damaging Het
Rusc1 T A 3: 88,991,865 (GRCm39) D407V probably damaging Het
Rwdd1 T A 10: 33,895,383 (GRCm39) I18F possibly damaging Het
Satb2 C T 1: 56,910,470 (GRCm39) probably null Het
Sds A G 5: 120,621,659 (GRCm39) E267G probably damaging Het
Sema4b T A 7: 79,875,076 (GRCm39) V822E probably damaging Het
Sfxn5 A T 6: 85,266,176 (GRCm39) M107K probably damaging Het
Slc5a8 C T 10: 88,722,035 (GRCm39) probably benign Het
Sorbs1 T C 19: 40,387,048 (GRCm39) D6G probably damaging Het
Syt14 A C 1: 192,666,515 (GRCm39) probably benign Het
Vmn2r124 T G 17: 18,283,291 (GRCm39) Y328* probably null Het
Vmn2r86 T A 10: 130,289,672 (GRCm39) E74D probably benign Het
Vmo1 A C 11: 70,404,476 (GRCm39) L175W probably damaging Het
Vps13a G T 19: 16,683,247 (GRCm39) L982I possibly damaging Het
Wdr19 T C 5: 65,398,211 (GRCm39) V812A probably benign Het
Wdr27 T C 17: 15,103,908 (GRCm39) I733V probably benign Het
Wdr54 A T 6: 83,132,739 (GRCm39) H38Q probably damaging Het
Wdr76 G A 2: 121,341,104 (GRCm39) V50I probably damaging Het
Zfp930 T A 8: 69,680,541 (GRCm39) N59K probably damaging Het
Zfyve9 T C 4: 108,501,558 (GRCm39) N1218S possibly damaging Het
Other mutations in Cd101
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00958:Cd101 APN 3 100,911,018 (GRCm39) missense probably damaging 1.00
IGL01443:Cd101 APN 3 100,910,887 (GRCm39) missense probably benign
IGL02000:Cd101 APN 3 100,919,398 (GRCm39) missense probably benign 0.11
IGL02178:Cd101 APN 3 100,901,082 (GRCm39) missense probably damaging 1.00
IGL02224:Cd101 APN 3 100,924,318 (GRCm39) missense probably benign
IGL02450:Cd101 APN 3 100,901,054 (GRCm39) missense probably damaging 0.99
IGL02502:Cd101 APN 3 100,919,141 (GRCm39) missense probably damaging 0.99
IGL02536:Cd101 APN 3 100,910,913 (GRCm39) missense probably damaging 1.00
IGL02749:Cd101 APN 3 100,927,715 (GRCm39) missense probably damaging 1.00
IGL02818:Cd101 APN 3 100,919,245 (GRCm39) missense probably damaging 1.00
IGL02829:Cd101 APN 3 100,925,881 (GRCm39) splice site probably benign
IGL02902:Cd101 APN 3 100,926,310 (GRCm39) splice site probably benign
tax_day UTSW 3 100,911,021 (GRCm39) missense possibly damaging 0.86
R0069:Cd101 UTSW 3 100,915,533 (GRCm39) missense probably benign 0.08
R0069:Cd101 UTSW 3 100,915,533 (GRCm39) missense probably benign 0.08
R0411:Cd101 UTSW 3 100,925,843 (GRCm39) splice site probably null
R0486:Cd101 UTSW 3 100,915,408 (GRCm39) missense possibly damaging 0.94
R0556:Cd101 UTSW 3 100,927,970 (GRCm39) missense probably damaging 1.00
R0726:Cd101 UTSW 3 100,927,938 (GRCm39) missense possibly damaging 0.95
R0966:Cd101 UTSW 3 100,915,538 (GRCm39) missense probably benign 0.13
R1344:Cd101 UTSW 3 100,926,091 (GRCm39) nonsense probably null
R1418:Cd101 UTSW 3 100,926,091 (GRCm39) nonsense probably null
R1547:Cd101 UTSW 3 100,926,267 (GRCm39) missense possibly damaging 0.94
R1551:Cd101 UTSW 3 100,919,329 (GRCm39) missense probably damaging 0.99
R1845:Cd101 UTSW 3 100,936,764 (GRCm39) splice site probably null
R1919:Cd101 UTSW 3 100,926,233 (GRCm39) missense probably damaging 1.00
R1976:Cd101 UTSW 3 100,915,377 (GRCm39) missense probably damaging 0.96
R2260:Cd101 UTSW 3 100,924,261 (GRCm39) missense possibly damaging 0.82
R2679:Cd101 UTSW 3 100,901,079 (GRCm39) missense probably benign 0.00
R2873:Cd101 UTSW 3 100,911,164 (GRCm39) missense probably benign 0.00
R3606:Cd101 UTSW 3 100,927,913 (GRCm39) missense probably damaging 1.00
R4201:Cd101 UTSW 3 100,926,001 (GRCm39) missense probably damaging 1.00
R4202:Cd101 UTSW 3 100,926,001 (GRCm39) missense probably damaging 1.00
R4205:Cd101 UTSW 3 100,926,001 (GRCm39) missense probably damaging 1.00
R4349:Cd101 UTSW 3 100,920,630 (GRCm39) missense possibly damaging 0.93
R4574:Cd101 UTSW 3 100,920,469 (GRCm39) missense probably benign 0.02
R4601:Cd101 UTSW 3 100,901,204 (GRCm39) missense possibly damaging 0.84
R4820:Cd101 UTSW 3 100,929,471 (GRCm39) missense probably benign 0.01
R4910:Cd101 UTSW 3 100,901,205 (GRCm39) missense probably benign 0.13
R5014:Cd101 UTSW 3 100,911,139 (GRCm39) missense probably damaging 0.99
R5081:Cd101 UTSW 3 100,911,021 (GRCm39) missense possibly damaging 0.86
R5396:Cd101 UTSW 3 100,926,126 (GRCm39) missense probably damaging 1.00
R5425:Cd101 UTSW 3 100,926,002 (GRCm39) missense probably damaging 1.00
R6193:Cd101 UTSW 3 100,927,778 (GRCm39) missense probably damaging 1.00
R6210:Cd101 UTSW 3 100,925,959 (GRCm39) missense probably damaging 1.00
R6732:Cd101 UTSW 3 100,915,515 (GRCm39) missense probably benign 0.01
R6830:Cd101 UTSW 3 100,901,012 (GRCm39) missense probably benign 0.12
R6897:Cd101 UTSW 3 100,920,376 (GRCm39) missense probably damaging 1.00
R6940:Cd101 UTSW 3 100,911,018 (GRCm39) missense probably damaging 1.00
R7335:Cd101 UTSW 3 100,926,045 (GRCm39) missense probably benign 0.01
R7565:Cd101 UTSW 3 100,926,108 (GRCm39) missense probably benign 0.00
R7880:Cd101 UTSW 3 100,915,182 (GRCm39) missense probably benign 0.00
R8121:Cd101 UTSW 3 100,927,898 (GRCm39) missense probably damaging 1.00
R8233:Cd101 UTSW 3 100,900,989 (GRCm39) missense unknown
R8900:Cd101 UTSW 3 100,926,062 (GRCm39) missense probably benign 0.19
R9260:Cd101 UTSW 3 100,920,599 (GRCm39) missense probably benign 0.16
R9335:Cd101 UTSW 3 100,915,431 (GRCm39) missense probably benign 0.18
R9663:Cd101 UTSW 3 100,911,222 (GRCm39) missense probably benign 0.21
X0018:Cd101 UTSW 3 100,925,948 (GRCm39) missense possibly damaging 0.95
X0023:Cd101 UTSW 3 100,926,171 (GRCm39) missense probably benign
X0058:Cd101 UTSW 3 100,927,737 (GRCm39) missense probably damaging 1.00
Z1177:Cd101 UTSW 3 100,924,456 (GRCm39) missense probably benign 0.02
Z1177:Cd101 UTSW 3 100,919,232 (GRCm39) missense probably benign 0.03
Predicted Primers PCR Primer
(F):5'- ATCTGTGCCCAAACCTCACG -3'
(R):5'- AGTATGACGGCTTGCTGCAG -3'

Sequencing Primer
(F):5'- GCTGGTTAAAATGAGTTAGTATGGAG -3'
(R):5'- CGGCTTGCTGCAGTATGGC -3'
Posted On 2021-08-31