Mutagenetix > Incidental Mutation

Incidental Mutation 'R8968:Sel1l2'

682832

Institutional Source

Beutler Lab

Gene Symbol

Sel1l2

Ensembl Gene

ENSMUSG00000074764

Gene Name

sel-1 suppressor of lin-12-like 2 (C. elegans)

Synonyms

LOC228684

MMRRC Submission

068802-MU

Accession Numbers

Essential gene?

Possibly essential (E-score: 0.574) question?

Stock #

R8968 (G1)

Quality Score

225.009

Status

Not validated

Chromosome

Chromosomal Location

140071775-140231626 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

T to C at 140127209 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Lysine to Glutamic Acid at position 101 (K101E)

Ref Sequence

ENSEMBL: ENSMUSP00000113800 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000122367]

AlphaFold

Q3V172

Predicted Effect

probably benign
Transcript: ENSMUST00000122367
AA Change: K101E

PolyPhen 2 Score 0.142 (Sensitivity: 0.92; Specificity: 0.86)

SMART Domains

Protein: ENSMUSP00000113800
Gene: ENSMUSG00000074764
AA Change: K101E

Domain	Start	End	E-Value	Type
signal peptide	1	23	N/A	INTRINSIC
low complexity region	70	83	N/A	INTRINSIC
SEL1	107	142	1.99e2	SMART
SEL1	143	178	3.3e1	SMART
SEL1	179	214	5.7e-1	SMART
SEL1	215	250	6.3e-3	SMART
SEL1	297	333	6.59e-6	SMART
SEL1	334	370	1.32e-5	SMART
SEL1	371	406	4.55e-9	SMART
SEL1	407	442	4.02e-10	SMART
SEL1	443	478	2.72e-7	SMART
Blast:SEL1	511	550	9e-13	BLAST
SEL1	551	586	1.01e-6	SMART
SEL1	588	623	4.55e-9	SMART
transmembrane domain	661	683	N/A	INTRINSIC

Coding Region Coverage

1x: 100.0%
3x: 99.9%
10x: 99.4%
20x: 97.9%

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 80 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
2210408I21Rik	T	A	13: 77,480,429 (GRCm39)	L1153*	probably null	Het
Adamts2	T	C	11: 50,683,550 (GRCm39)	I944T	possibly damaging	Het
Aqp9	A	T	9: 71,045,485 (GRCm39)	C67*	probably null	Het
Armt1	G	T	10: 4,404,150 (GRCm39)	G412W	probably damaging	Het
B4galt1	T	C	4: 40,807,243 (GRCm39)	D381G	probably benign	Het
Bmp5	A	T	9: 75,780,579 (GRCm39)	H292L	probably benign	Het
Brpf1	T	C	6: 113,299,510 (GRCm39)	F1181S	probably damaging	Het
Btbd7	C	A	12: 102,779,025 (GRCm39)	G414C	probably damaging	Het
Ccdc65	A	T	15: 98,616,723 (GRCm39)	K204*	probably null	Het
Cdk5	T	A	5: 24,627,379 (GRCm39)	K88M	probably damaging	Het
Cdrt4	T	A	11: 62,883,634 (GRCm39)	L112Q	probably damaging	Het
Cenpb	T	C	2: 131,020,547 (GRCm39)	E417G	unknown	Het
Cep135	T	C	5: 76,754,576 (GRCm39)	I351T	possibly damaging	Het
Ces1d	A	T	8: 93,914,383 (GRCm39)	S226R	probably damaging	Het
Cfap97	T	A	8: 46,623,114 (GRCm39)	V168E	possibly damaging	Het
CN725425	T	C	15: 91,130,090 (GRCm39)	C318R	possibly damaging	Het
Cnga3	T	A	1: 37,300,460 (GRCm39)	D393E	probably benign	Het
Cplane1	A	T	15: 8,230,765 (GRCm39)	H1014L	possibly damaging	Het
Cpsf1	G	A	15: 76,486,169 (GRCm39)	R358*	probably null	Het
Cyp2b23	G	A	7: 26,378,963 (GRCm39)	P167L	probably damaging	Het
Cyp2c70	A	T	19: 40,142,059 (GRCm39)	H477Q	probably benign	Het
D930020B18Rik	A	C	10: 121,490,721 (GRCm39)	Y107S	probably damaging	Het
Dhrs1	A	T	14: 55,978,192 (GRCm39)	F216I	probably benign	Het
Dmgdh	A	T	13: 93,845,767 (GRCm39)	K474*	probably null	Het
Dsp	T	C	13: 38,335,596 (GRCm39)	I11T	possibly damaging	Het
Erh	G	T	12: 80,684,282 (GRCm39)	A65E	probably benign	Het
Fmnl1	AGGCTCTGG	AGG	11: 103,077,444 (GRCm39)		probably benign	Het
Grid2	A	C	6: 64,643,139 (GRCm39)	H967P	probably benign	Het
Hc	A	G	2: 34,922,317 (GRCm39)	I503T	possibly damaging	Het
Herc3	T	C	6: 58,867,183 (GRCm39)	L824S	probably damaging	Het
Hfm1	T	C	5: 107,065,439 (GRCm39)	D80G	probably benign	Het
Hjurp	CTCTGGGAGGGCTTGCTCCGGGGGCAGTGTGTCCTGTTCTTGTGCAGCCCCT	C	1: 88,193,999 (GRCm39)		probably benign	Het
Hspa1l	A	G	17: 35,196,230 (GRCm39)	K90E	possibly damaging	Het
Impa2	G	A	18: 67,451,497 (GRCm39)	V264I	probably benign	Het
Ipmk	C	T	10: 71,199,333 (GRCm39)	R65W	probably damaging	Het
Klhl38	C	T	15: 58,185,500 (GRCm39)	V410I	probably benign	Het
Lcn4	A	G	2: 26,558,360 (GRCm39)	I175T	possibly damaging	Het
Lipo2	C	A	19: 33,726,917 (GRCm39)	W40L	probably damaging	Het
Mgam	A	T	6: 40,734,745 (GRCm39)		probably null	Het
Myo16	T	A	8: 10,619,700 (GRCm39)	I1417N	unknown	Het
Or2n1d	A	T	17: 38,646,320 (GRCm39)	T91S	possibly damaging	Het
Or4a66	T	A	2: 88,531,137 (GRCm39)	I179F	probably benign	Het
Or52e19b	A	T	7: 103,032,667 (GRCm39)	C181S	probably damaging	Het
Or5j3	G	A	2: 86,128,526 (GRCm39)	R122H	probably benign	Het
Pcdha11	A	G	18: 37,145,307 (GRCm39)	N466S	probably damaging	Het
Pif1	C	T	9: 65,499,076 (GRCm39)	T432M	probably damaging	Het
Pigt	CCAGGCCAGTGAGTAGGTTTGTCTCTGTCTAGTGTGGATCTGTAACCACAGGCCAGTGAGTAGGTTTGTCTCTGTCTAGTGTGGATCTGTAACCACAGGCCAGTGAGTAGGTTTGTCTCTGTCTAGTGTGGAT	CCAGGCCAGTGAGTAGGTTTGTCTCTGTCTAGTGTGGATCTGTAACCACAGGCCAGTGAGTAGGTTTGTCTCTGTCTAGTGTGGAT	2: 164,341,589 (GRCm39)		probably null	Het
Pkd1l3	CCACAGGTGACATCAGAGACACCTGCATCCAGCAGCCCAACACAGGTGACATCAGAGACACCTGCATCCAGCAGCCCAACACAGGTGACATCAGACACACCTGCATCCAATAGCCCACCACAGGGGACATCAGACACACCTGGATTCAGCAGCCCAACACAGGTGACAACAGCCACACTTGTATCCAGCAGCCCACCACAGGTGACATCAGACACACCTGCATCCAGCAGCCCACCACAGGTGACATCAGACACACCTGCATCCAGCAGCCCACCACAGGTGACATCAGAGACACCTGCATCCAGCAGCCCACCACAGGTGACATCAGACACATCTGCATCCATCAGCCCACCACAGGTAATATCAGACACACCTGCATCCAGCAGCCCACCACAGGTGACATCAGAGACACCTGCATCCAGCAGCCCAACA	CCACAGGTGACATCAGAGACACCTGCATCCAGCAGCCCAACACAGGTGACATCAGACACACCTGCATCCAATAGCCCACCACAGGGGACATCAGACACACCTGGATTCAGCAGCCCAACACAGGTGACAACAGCCACACTTGTATCCAGCAGCCCACCACAGGTGACATCAGACACACCTGCATCCAGCAGCCCACCACAGGTGACATCAGACACACCTGCATCCAGCAGCCCACCACAGGTGACATCAGAGACACCTGCATCCAGCAGCCCACCACAGGTGACATCAGACACATCTGCATCCATCAGCCCACCACAGGTAATATCAGACACACCTGCATCCAGCAGCCCACCACAGGTGACATCAGAGACACCTGCATCCAGCAGCCCAACA	8: 110,350,420 (GRCm39)		probably benign	Het
Pole	T	C	5: 110,459,949 (GRCm39)	S1118P	possibly damaging	Het
Ppp4r4	T	C	12: 103,566,706 (GRCm39)	M652T	probably benign	Het
Prex2	A	T	1: 11,180,562 (GRCm39)	K376*	probably null	Het
Prps1l1	A	T	12: 35,035,205 (GRCm39)	I107F	probably damaging	Het
Resf1	T	A	6: 149,228,664 (GRCm39)	V570D	probably damaging	Het
Rfc1	C	T	5: 65,432,778 (GRCm39)	V761I	probably benign	Het
Ripk4	T	C	16: 97,547,203 (GRCm39)	E353G	probably benign	Het
Robo2	C	A	16: 73,767,941 (GRCm39)		probably null	Het
Rrm1	C	T	7: 102,117,545 (GRCm39)	A745V	probably benign	Het
Sash1	A	T	10: 8,606,179 (GRCm39)	V737D	probably benign	Het
Selenbp2	A	T	3: 94,607,337 (GRCm39)	I253F	probably benign	Het
Setd1a	C	T	7: 127,385,279 (GRCm39)	P662L	possibly damaging	Het
Slc16a6	C	T	11: 109,345,776 (GRCm39)	V496I	possibly damaging	Het
Slc4a4	A	T	5: 89,232,512 (GRCm39)	M239L	probably benign	Het
Slc7a8	G	C	14: 55,018,750 (GRCm39)	A12G	probably benign	Het
Snx30	T	C	4: 59,886,517 (GRCm39)	S309P	possibly damaging	Het
Spen	T	C	4: 141,197,701 (GRCm39)	N3389S	probably benign	Het
Spg11	T	C	2: 121,922,687 (GRCm39)	T921A	probably damaging	Het
Tanc2	T	A	11: 105,758,400 (GRCm39)	D720E	possibly damaging	Het
Tmprss9	A	T	10: 80,730,163 (GRCm39)	I688F	possibly damaging	Het
Trap1	A	G	16: 3,862,490 (GRCm39)	V596A	possibly damaging	Het
Ttc32	G	T	12: 9,080,187 (GRCm39)	R44L	probably benign	Het
Tusc3	T	A	8: 39,597,898 (GRCm39)	N288K	probably benign	Het
Ush2a	G	A	1: 188,127,956 (GRCm39)	G656E	probably damaging	Het
Vill	T	C	9: 118,892,671 (GRCm39)		probably null	Het
Vmn1r5	A	T	6: 56,963,182 (GRCm39)	R286*	probably null	Het
Vmn2r14	T	C	5: 109,365,533 (GRCm39)	T514A	probably benign	Het
Vmn2r32	G	A	7: 7,477,204 (GRCm39)	H396Y	probably benign	Het
Vmn2r75	A	T	7: 85,820,765 (GRCm39)	Y56*	probably null	Het
Wdfy3	C	T	5: 102,011,983 (GRCm39)	S2668N	probably benign	Het
Wdr72	G	A	9: 74,059,729 (GRCm39)	D392N	probably benign	Het
Zfp518a	A	C	19: 40,901,870 (GRCm39)	K600Q	possibly damaging	Het

Other mutations in Sel1l2

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00587:Sel1l2	APN	2	140,085,864 (GRCm39)	missense	possibly damaging	0.95
IGL01782:Sel1l2	APN	2	140,085,855 (GRCm39)	missense	probably damaging	1.00
IGL02238:Sel1l2	APN	2	140,089,859 (GRCm39)	missense	probably damaging	1.00
IGL02506:Sel1l2	APN	2	140,117,380 (GRCm39)	missense	possibly damaging	0.89
IGL02539:Sel1l2	APN	2	140,072,778 (GRCm39)	missense	probably damaging	1.00
IGL02999:Sel1l2	APN	2	140,072,724 (GRCm39)	missense	probably damaging	1.00
IGL03388:Sel1l2	APN	2	140,105,284 (GRCm39)	splice site	probably benign
IGL02988:Sel1l2	UTSW	2	140,090,508 (GRCm39)	missense	probably damaging	1.00
R0386:Sel1l2	UTSW	2	140,117,361 (GRCm39)	missense	probably benign	0.11
R0426:Sel1l2	UTSW	2	140,082,832 (GRCm39)	nonsense	probably null
R0549:Sel1l2	UTSW	2	140,107,802 (GRCm39)	missense	probably damaging	0.99
R1404:Sel1l2	UTSW	2	140,071,979 (GRCm39)	splice site	probably benign
R1502:Sel1l2	UTSW	2	140,231,515 (GRCm39)	missense	probably damaging	0.99
R1746:Sel1l2	UTSW	2	140,127,157 (GRCm39)	missense	probably damaging	0.98
R2187:Sel1l2	UTSW	2	140,072,793 (GRCm39)	missense	probably damaging	1.00
R2233:Sel1l2	UTSW	2	140,086,085 (GRCm39)	missense	probably damaging	1.00
R2235:Sel1l2	UTSW	2	140,086,085 (GRCm39)	missense	probably damaging	1.00
R3402:Sel1l2	UTSW	2	140,082,958 (GRCm39)	missense	probably damaging	1.00
R4717:Sel1l2	UTSW	2	140,071,943 (GRCm39)	missense	possibly damaging	0.89
R4724:Sel1l2	UTSW	2	140,082,847 (GRCm39)	missense	probably damaging	0.99
R4840:Sel1l2	UTSW	2	140,105,390 (GRCm39)	missense	probably benign	0.00
R4948:Sel1l2	UTSW	2	140,086,086 (GRCm39)	missense	probably damaging	1.00
R6008:Sel1l2	UTSW	2	140,086,025 (GRCm39)	missense	probably damaging	1.00
R6058:Sel1l2	UTSW	2	140,082,889 (GRCm39)	missense	possibly damaging	0.94
R6389:Sel1l2	UTSW	2	140,087,274 (GRCm39)	missense	probably damaging	1.00
R7031:Sel1l2	UTSW	2	140,182,043 (GRCm39)	missense	possibly damaging	0.84
R7056:Sel1l2	UTSW	2	140,087,334 (GRCm39)	missense	probably benign	0.13
R7074:Sel1l2	UTSW	2	140,105,362 (GRCm39)	missense	probably damaging	1.00
R7213:Sel1l2	UTSW	2	140,086,055 (GRCm39)	missense	probably damaging	1.00
R7348:Sel1l2	UTSW	2	140,107,644 (GRCm39)	missense	probably benign
R8030:Sel1l2	UTSW	2	140,082,938 (GRCm39)	missense	probably damaging	0.97
R8100:Sel1l2	UTSW	2	140,117,329 (GRCm39)	missense	probably damaging	1.00
R8165:Sel1l2	UTSW	2	140,104,626 (GRCm39)	missense	probably damaging	1.00
R8201:Sel1l2	UTSW	2	140,108,312 (GRCm39)	missense	probably damaging	1.00
R8343:Sel1l2	UTSW	2	140,072,753 (GRCm39)	missense	probably benign	0.03
R9038:Sel1l2	UTSW	2	140,117,384 (GRCm39)	missense	probably damaging	1.00
R9226:Sel1l2	UTSW	2	140,097,222 (GRCm39)	missense	probably damaging	1.00
X0019:Sel1l2	UTSW	2	140,090,535 (GRCm39)	missense	probably damaging	1.00

Predicted Primers

PCR Primer
(F):5'- CATGGAAAGGGACTCCAGTC -3'
(R):5'- CGATTGCGAGCATCTCTTTC -3'

Sequencing Primer
(F):5'- CAAGTTGATGAACAAGATCAGCATC -3'
(R):5'- GTATCTTCCAGGCCCCTGAG -3'

Posted On

2021-10-11