Incidental Mutation 'R8977:Or52n1'
ID 683500
Institutional Source Beutler Lab
Gene Symbol Or52n1
Ensembl Gene ENSMUSG00000051885
Gene Name olfactory receptor family 52 subfamily N member 1, pseudogene 1
Synonyms EG667918, Olfr664, MOR34-10P, GA_x6K02T2PBJ9-7361631-7360711
MMRRC Submission 068715-MU
Accession Numbers
Essential gene? Probably non essential (E-score: 0.168) question?
Stock # R8977 (G1)
Quality Score 136.008
Status Not validated
Chromosome 7
Chromosomal Location 104382592-104383557 bp(-) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) A to T at 104383248 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Phenylalanine to Isoleucine at position 108 (F108I)
Ref Sequence ENSEMBL: ENSMUSP00000147645 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000072887] [ENSMUST00000211596]
AlphaFold Q7TRP5
Predicted Effect probably damaging
Transcript: ENSMUST00000072887
AA Change: F104I

PolyPhen 2 Score 0.992 (Sensitivity: 0.70; Specificity: 0.97)
Predicted Effect probably damaging
Transcript: ENSMUST00000211596
AA Change: F108I

PolyPhen 2 Score 0.987 (Sensitivity: 0.73; Specificity: 0.96)
Coding Region Coverage
  • 1x: 100.0%
  • 3x: 99.9%
  • 10x: 99.7%
  • 20x: 99.0%
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 70 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
4930438A08Rik A G 11: 58,184,710 (GRCm39) E476G unknown Het
Aars1 G A 8: 111,766,849 (GRCm39) R77Q probably damaging Het
Abcc10 C A 17: 46,624,593 (GRCm39) V795L probably benign Het
Adam30 A G 3: 98,069,378 (GRCm39) K276E probably damaging Het
Adam6b A T 12: 113,453,996 (GRCm39) N271I probably benign Het
Adgrl2 T C 3: 148,660,223 (GRCm39) I17V probably null Het
Anapc1 C A 2: 128,483,322 (GRCm39) G1258C probably damaging Het
Ank2 G T 3: 126,738,575 (GRCm39) H2436Q unknown Het
Ankrd13a A T 5: 114,933,806 (GRCm39) K267* probably null Het
Apob T C 12: 8,065,990 (GRCm39) Y4320H probably damaging Het
Atp2b2 T C 6: 113,750,325 (GRCm39) D678G probably damaging Het
Bhlhe41 C A 6: 145,809,096 (GRCm39) V239F possibly damaging Het
Cbfa2t2 T G 2: 154,342,410 (GRCm39) L42R probably benign Het
Ccer2 G A 7: 28,456,113 (GRCm39) V52M probably damaging Het
Ccnj T C 19: 40,833,383 (GRCm39) F187S probably damaging Het
Cd109 G A 9: 78,614,810 (GRCm39) V1286I probably benign Het
Cfap210 T C 2: 69,617,643 (GRCm39) H46R possibly damaging Het
Cfap46 G T 7: 139,259,849 (GRCm39) T148N probably benign Het
Chmp7 A G 14: 69,958,684 (GRCm39) V210A probably benign Het
Cuzd1 A G 7: 130,923,754 (GRCm39) F8S probably benign Het
Dnmbp A T 19: 43,840,751 (GRCm39) D549E probably damaging Het
Dpp4 A G 2: 62,204,747 (GRCm39) L240P probably benign Het
Dst A T 1: 34,286,864 (GRCm39) R3398S probably damaging Het
Eml6 A G 11: 29,734,182 (GRCm39) I1186T possibly damaging Het
Extl1 T C 4: 134,086,435 (GRCm39) E540G possibly damaging Het
Gdpd5 A G 7: 99,103,057 (GRCm39) I339V probably benign Het
Ggcx T C 6: 72,406,265 (GRCm39) probably null Het
Gm9195 A G 14: 72,691,338 (GRCm39) F1637L unknown Het
Igkv5-48 G C 6: 69,703,616 (GRCm39) N96K possibly damaging Het
Itga11 T C 9: 62,662,922 (GRCm39) I546T probably damaging Het
Map3k5 T A 10: 19,955,000 (GRCm39) F624L possibly damaging Het
Map7 T A 10: 20,145,336 (GRCm39) probably null Het
Mdga2 A T 12: 66,844,409 (GRCm39) D196E possibly damaging Het
Mettl2 T C 11: 105,019,791 (GRCm39) C143R probably benign Het
Mmut G T 17: 41,249,481 (GRCm39) R152L probably benign Het
Ncam1 G T 9: 49,418,825 (GRCm39) T825K probably damaging Het
Nucb2 C A 7: 116,128,063 (GRCm39) N257K probably benign Het
Or1e19 A G 11: 73,316,651 (GRCm39) S53P probably benign Het
Or1p1c A T 11: 74,160,304 (GRCm39) I30F probably benign Het
Or2b7 T A 13: 21,740,016 (GRCm39) M59L possibly damaging Het
Or51i1 A T 7: 103,670,762 (GRCm39) Y254* probably null Het
Or8k38 C T 2: 86,488,472 (GRCm39) C110Y probably benign Het
Pamr1 T A 2: 102,441,963 (GRCm39) V184D probably damaging Het
Paqr9 A T 9: 95,442,888 (GRCm39) I293F possibly damaging Het
Pi15 G T 1: 17,690,126 (GRCm39) probably null Het
Pkm T A 9: 59,578,923 (GRCm39) I301N probably damaging Het
Pramel1 T A 4: 143,123,961 (GRCm39) I212N probably benign Het
Prdm6 A T 18: 53,701,373 (GRCm39) I549F probably damaging Het
Prpf8 A G 11: 75,386,870 (GRCm39) E1105G probably benign Het
Rad51b T A 12: 79,704,662 (GRCm39) V274E probably damaging Het
Rd3l T A 12: 111,946,593 (GRCm39) Y61F probably damaging Het
Resf1 T A 6: 149,229,906 (GRCm39) I984N probably damaging Het
Rgs11 T C 17: 26,427,233 (GRCm39) V388A probably damaging Het
Rictor A G 15: 6,812,566 (GRCm39) I901V probably benign Het
Riox2 A G 16: 59,312,195 (GRCm39) D444G probably benign Het
Scn2a T A 2: 65,594,014 (GRCm39) V1621E probably damaging Het
Sec11c A G 18: 65,945,818 (GRCm39) I94V possibly damaging Het
Sfi1 ACA ACATCTTCCCAAAGCCAGTCA 11: 3,103,382 (GRCm39) probably benign Het
Slc34a1 T C 13: 55,556,815 (GRCm39) I337T probably benign Het
Slc6a19 T C 13: 73,830,269 (GRCm39) K516E probably benign Het
Slco1b2 A T 6: 141,628,980 (GRCm39) M596L probably benign Het
Smarce1 A G 11: 99,110,511 (GRCm39) I100T possibly damaging Het
Stk32c A T 7: 138,705,161 (GRCm39) M119K possibly damaging Het
Tekt2 T C 4: 126,217,266 (GRCm39) probably null Het
Tenm4 A T 7: 96,461,177 (GRCm39) N908Y probably damaging Het
Tex38 A G 4: 115,637,792 (GRCm39) S4P probably benign Het
Top2b T A 14: 16,393,239 (GRCm38) H299Q probably benign Het
Trim55 C A 3: 19,713,341 (GRCm39) R131S probably benign Het
Vmn2r109 A T 17: 20,774,531 (GRCm39) Y275N possibly damaging Het
Vmn2r116 C T 17: 23,605,916 (GRCm39) T276I possibly damaging Het
Other mutations in Or52n1
AlleleSourceChrCoordTypePredicted EffectPPH Score
A9681:Or52n1 UTSW 7 104,383,610 (GRCm39) unclassified probably benign
R2862:Or52n1 UTSW 7 104,383,425 (GRCm39) missense probably benign
R3923:Or52n1 UTSW 7 104,383,396 (GRCm39) missense probably benign 0.07
R3925:Or52n1 UTSW 7 104,383,396 (GRCm39) missense probably benign 0.07
R4327:Or52n1 UTSW 7 104,382,833 (GRCm39) missense probably damaging 1.00
R6226:Or52n1 UTSW 7 104,383,243 (GRCm39) missense probably damaging 0.98
R6370:Or52n1 UTSW 7 104,383,124 (GRCm39) missense probably benign 0.03
R7283:Or52n1 UTSW 7 104,382,800 (GRCm39) missense probably damaging 1.00
R7397:Or52n1 UTSW 7 104,382,815 (GRCm39) missense possibly damaging 0.46
R7554:Or52n1 UTSW 7 104,383,074 (GRCm39) missense probably benign
R8732:Or52n1 UTSW 7 104,383,115 (GRCm39) missense probably benign 0.00
Predicted Primers PCR Primer
(F):5'- TATGGCAGGCGCTTGGTAAG -3'
(R):5'- CCATGTACAGCATTGCTCTTACAG -3'

Sequencing Primer
(F):5'- CAGGCGCTTGGTAAGGAATATG -3'
(R):5'- GCTCTTACAGGAAAATTTGGGC -3'
Posted On 2021-10-11