Incidental Mutation 'R8985:Ccdc162'
ID 683977
Institutional Source Beutler Lab
Gene Symbol Ccdc162
Ensembl Gene ENSMUSG00000075225
Gene Name coiled-coil domain containing 162
Synonyms Gm29096, Gm6976, 5033413D22Rik
MMRRC Submission 068818-MU
Accession Numbers
Essential gene? Probably non essential (E-score: 0.070) question?
Stock # R8985 (G1)
Quality Score 225.009
Status Validated
Chromosome 10
Chromosomal Location 41414838-41592586 bp(-) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) A to G at 41432102 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Isoleucine to Threonine at position 1797 (I1797T)
Ref Sequence ENSEMBL: ENSMUSP00000140774 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000019955] [ENSMUST00000099932] [ENSMUST00000179614] [ENSMUST00000189488] [ENSMUST00000219054]
AlphaFold no structure available at present
Predicted Effect possibly damaging
Transcript: ENSMUST00000019955
AA Change: I5T

PolyPhen 2 Score 0.924 (Sensitivity: 0.81; Specificity: 0.94)
SMART Domains Protein: ENSMUSP00000019955
Gene: ENSMUSG00000075225
AA Change: I5T

DomainStartEndE-ValueType
coiled coil region 1 37 N/A INTRINSIC
low complexity region 116 138 N/A INTRINSIC
coiled coil region 177 217 N/A INTRINSIC
Predicted Effect
SMART Domains Protein: ENSMUSP00000092852
Gene: ENSMUSG00000075225
AA Change: I147T

DomainStartEndE-ValueType
coiled coil region 140 179 N/A INTRINSIC
low complexity region 304 326 N/A INTRINSIC
Predicted Effect probably damaging
Transcript: ENSMUST00000099932
AA Change: I334T

PolyPhen 2 Score 0.963 (Sensitivity: 0.78; Specificity: 0.95)
SMART Domains Protein: ENSMUSP00000097516
Gene: ENSMUSG00000075225
AA Change: I334T

DomainStartEndE-ValueType
coiled coil region 327 366 N/A INTRINSIC
low complexity region 490 512 N/A INTRINSIC
coiled coil region 551 607 N/A INTRINSIC
Predicted Effect probably damaging
Transcript: ENSMUST00000179614
AA Change: I524T

PolyPhen 2 Score 0.963 (Sensitivity: 0.78; Specificity: 0.95)
SMART Domains Protein: ENSMUSP00000135966
Gene: ENSMUSG00000075225
AA Change: I524T

DomainStartEndE-ValueType
coiled coil region 517 556 N/A INTRINSIC
low complexity region 680 702 N/A INTRINSIC
coiled coil region 741 797 N/A INTRINSIC
Predicted Effect probably damaging
Transcript: ENSMUST00000189488
AA Change: I1797T

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
SMART Domains Protein: ENSMUSP00000140774
Gene: ENSMUSG00000075225
AA Change: I1797T

DomainStartEndE-ValueType
low complexity region 328 347 N/A INTRINSIC
Predicted Effect probably damaging
Transcript: ENSMUST00000219054
AA Change: I524T

PolyPhen 2 Score 0.963 (Sensitivity: 0.78; Specificity: 0.95)
Meta Mutation Damage Score 0.6329 question?
Coding Region Coverage
  • 1x: 100.0%
  • 3x: 99.9%
  • 10x: 99.5%
  • 20x: 98.4%
Validation Efficiency 100% (74/74)
Allele List at MGI
Other mutations in this stock
Total: 72 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Acad9 T A 3: 36,141,860 (GRCm39) probably benign Het
Agbl1 C A 7: 75,969,904 (GRCm39) S53R Het
Ahr T C 12: 35,576,736 (GRCm39) K65R possibly damaging Het
AI429214 A T 8: 37,460,820 (GRCm39) probably benign Het
Ankrd52 T C 10: 128,222,978 (GRCm39) S643P probably damaging Het
Asz1 T C 6: 18,051,336 (GRCm39) T448A probably benign Het
Atp10a A G 7: 58,438,092 (GRCm39) I425V probably benign Het
Casd1 T A 6: 4,624,399 (GRCm39) Y397* probably null Het
Cdc20b A T 13: 113,196,330 (GRCm39) R152* probably null Het
Cdc25b T C 2: 131,035,180 (GRCm39) C313R probably damaging Het
Cfap73 T A 5: 120,768,123 (GRCm39) T212S probably benign Het
Chd9 G T 8: 91,721,101 (GRCm39) R963L unknown Het
Clip4 G T 17: 72,113,527 (GRCm39) V226F probably damaging Het
Cmya5 A G 13: 93,233,664 (GRCm39) S475P possibly damaging Het
Cntn5 A G 9: 10,171,960 (GRCm39) Y75H possibly damaging Het
Crtc1 T G 8: 70,855,092 (GRCm39) H176P probably damaging Het
Cspg5 T C 9: 110,085,502 (GRCm39) W558R unknown Het
Cyp2c39 A G 19: 39,552,419 (GRCm39) T371A probably benign Het
Dcaf8 G A 1: 172,000,199 (GRCm39) R119H probably benign Het
Drosha G T 15: 12,924,187 (GRCm39) A1190S possibly damaging Het
Dst T C 1: 34,288,886 (GRCm39) V5655A probably benign Het
Etnk1 C G 6: 143,140,953 (GRCm39) probably benign Het
Flnc T A 6: 29,440,499 (GRCm39) V269D probably benign Het
Foxs1 T A 2: 152,775,058 (GRCm39) probably benign Het
Ftsj3 T C 11: 106,141,595 (GRCm39) Y551C possibly damaging Het
Fzd6 A T 15: 38,895,019 (GRCm39) H395L probably damaging Het
Grm6 C T 11: 50,746,537 (GRCm39) A289V possibly damaging Het
Hook1 A G 4: 95,910,468 (GRCm39) D694G probably benign Het
Idh2 TCCCAGG T 7: 79,748,079 (GRCm39) probably benign Het
Igha T C 12: 113,222,611 (GRCm39) E270G Het
Itga2b C A 11: 102,356,288 (GRCm39) probably benign Het
Jade1 A C 3: 41,568,148 (GRCm39) S739R probably benign Het
Lpin3 T C 2: 160,738,674 (GRCm39) S209P probably benign Het
Ly6i A C 15: 74,851,806 (GRCm39) L121R probably damaging Het
Ms4a1 C T 19: 11,232,055 (GRCm39) V107I probably benign Het
Mycbpap T A 11: 94,404,722 (GRCm39) T74S probably benign Het
Nlrp14 A G 7: 106,796,436 (GRCm39) N921D probably benign Het
Nmur1 C T 1: 86,314,103 (GRCm39) E388K probably benign Het
Nol4 T C 18: 23,085,294 (GRCm39) Y40C probably damaging Het
Or1e1c T C 11: 73,266,252 (GRCm39) S229P possibly damaging Het
Or51k1 A T 7: 103,661,367 (GRCm39) C181S probably damaging Het
Or8b51 A T 9: 38,569,621 (GRCm39) Y22* probably null Het
Pawr G A 10: 108,247,861 (GRCm39) V283M possibly damaging Het
Pde6b T C 5: 108,578,503 (GRCm39) Y814H probably benign Het
Pds5b T A 5: 150,724,239 (GRCm39) L1272H probably benign Het
Pkd1l2 T C 8: 117,764,849 (GRCm39) T1350A probably benign Het
Plcz1 T A 6: 139,961,903 (GRCm39) Q216L possibly damaging Het
Prodh A T 16: 17,890,362 (GRCm39) C522S probably null Het
Rasef G T 4: 73,708,960 (GRCm39) P91Q possibly damaging Het
Rgs14 G A 13: 55,531,234 (GRCm39) probably benign Het
Rnase6 A T 14: 51,367,632 (GRCm39) Y8F unknown Het
Rnf216 T A 5: 143,076,180 (GRCm39) T235S probably benign Het
Slco2a1 G A 9: 102,949,834 (GRCm39) probably null Het
Smoc1 A G 12: 81,226,261 (GRCm39) E362G probably damaging Het
Sncaip T C 18: 53,002,169 (GRCm39) L230P probably benign Het
Tdrd3 A G 14: 87,743,597 (GRCm39) E515G possibly damaging Het
Tipin T A 9: 64,195,385 (GRCm39) probably null Het
Tmem9 T A 1: 135,955,145 (GRCm39) V93D possibly damaging Het
Tpm3-rs7 A C 14: 113,552,756 (GRCm39) I217L probably benign Het
Ttc41 A T 10: 86,566,956 (GRCm39) I541F possibly damaging Het
Uck2 T C 1: 167,070,681 (GRCm39) D16G probably benign Het
Vmn1r50 A G 6: 90,085,017 (GRCm39) D254G probably benign Het
Vmn2r50 A C 7: 9,779,974 (GRCm39) F469C probably damaging Het
Vmn2r57 A G 7: 41,049,259 (GRCm39) V830A probably benign Het
Wwc2 T A 8: 48,331,919 (GRCm39) R299S probably benign Het
Xdh C T 17: 74,228,346 (GRCm39) G352R probably damaging Het
Xkr9 A T 1: 13,770,990 (GRCm39) M169L probably benign Het
Zbtb10 A G 3: 9,345,807 (GRCm39) D767G probably damaging Het
Zfp106 T C 2: 120,366,077 (GRCm39) Y65C Het
Zfp536 A G 7: 37,268,228 (GRCm39) L396P probably damaging Het
Znhit1 C A 5: 137,011,408 (GRCm39) C135F probably damaging Het
Zscan5b A G 7: 6,241,834 (GRCm39) E351G probably damaging Het
Other mutations in Ccdc162
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01013:Ccdc162 APN 10 41,457,335 (GRCm39) missense probably benign 0.01
IGL01366:Ccdc162 APN 10 41,456,302 (GRCm39) missense possibly damaging 0.49
IGL01924:Ccdc162 APN 10 41,445,883 (GRCm39) missense probably damaging 1.00
IGL02504:Ccdc162 APN 10 41,428,384 (GRCm39) missense probably damaging 1.00
IGL02678:Ccdc162 APN 10 41,437,151 (GRCm39) missense probably damaging 0.99
IGL02955:Ccdc162 APN 10 41,437,123 (GRCm39) missense probably damaging 1.00
beeswax UTSW 10 41,437,222 (GRCm39) missense possibly damaging 0.57
honeycomb UTSW 10 41,520,637 (GRCm39) missense probably benign 0.35
FR4304:Ccdc162 UTSW 10 41,432,117 (GRCm39) missense possibly damaging 0.49
R0432:Ccdc162 UTSW 10 41,417,856 (GRCm39) missense probably benign 0.01
R0585:Ccdc162 UTSW 10 41,462,375 (GRCm39) missense probably benign 0.03
R0645:Ccdc162 UTSW 10 41,462,407 (GRCm39) splice site probably benign
R0731:Ccdc162 UTSW 10 41,455,139 (GRCm39) missense probably damaging 1.00
R1426:Ccdc162 UTSW 10 41,429,178 (GRCm39) missense possibly damaging 0.89
R1447:Ccdc162 UTSW 10 41,456,243 (GRCm39) missense probably damaging 1.00
R1712:Ccdc162 UTSW 10 41,415,427 (GRCm39) missense probably benign 0.35
R2138:Ccdc162 UTSW 10 41,457,293 (GRCm39) missense probably benign 0.15
R2351:Ccdc162 UTSW 10 41,431,968 (GRCm39) critical splice donor site probably null
R2394:Ccdc162 UTSW 10 41,445,894 (GRCm39) missense probably damaging 1.00
R2431:Ccdc162 UTSW 10 41,445,841 (GRCm39) missense probably benign
R2571:Ccdc162 UTSW 10 41,428,393 (GRCm39) missense probably damaging 1.00
R2873:Ccdc162 UTSW 10 41,531,095 (GRCm39) missense possibly damaging 0.68
R2926:Ccdc162 UTSW 10 41,437,203 (GRCm39) start gained probably benign
R2999:Ccdc162 UTSW 10 41,456,286 (GRCm39) missense probably benign 0.00
R3412:Ccdc162 UTSW 10 41,415,545 (GRCm39) splice site probably benign
R3712:Ccdc162 UTSW 10 41,463,375 (GRCm39) missense probably benign
R3736:Ccdc162 UTSW 10 41,465,564 (GRCm39) splice site probably null
R4112:Ccdc162 UTSW 10 41,532,324 (GRCm39) missense possibly damaging 0.77
R4557:Ccdc162 UTSW 10 41,463,384 (GRCm39) missense probably benign 0.01
R4580:Ccdc162 UTSW 10 41,437,136 (GRCm39) missense probably benign 0.02
R4685:Ccdc162 UTSW 10 41,557,682 (GRCm39) missense possibly damaging 0.89
R4837:Ccdc162 UTSW 10 41,549,863 (GRCm39) missense probably benign 0.00
R5155:Ccdc162 UTSW 10 41,455,147 (GRCm39) missense probably damaging 1.00
R5155:Ccdc162 UTSW 10 41,429,576 (GRCm39) splice site probably null
R5645:Ccdc162 UTSW 10 41,428,352 (GRCm39) missense probably benign 0.06
R5656:Ccdc162 UTSW 10 41,445,930 (GRCm39) missense probably benign 0.26
R5682:Ccdc162 UTSW 10 41,432,799 (GRCm39) nonsense probably null
R5808:Ccdc162 UTSW 10 41,531,500 (GRCm39) missense possibly damaging 0.62
R5909:Ccdc162 UTSW 10 41,437,111 (GRCm39) missense probably damaging 1.00
R6000:Ccdc162 UTSW 10 41,437,159 (GRCm39) missense possibly damaging 0.75
R6057:Ccdc162 UTSW 10 41,510,037 (GRCm39) missense possibly damaging 0.72
R6211:Ccdc162 UTSW 10 41,506,141 (GRCm39) nonsense probably null
R6264:Ccdc162 UTSW 10 41,570,464 (GRCm39) missense probably benign 0.31
R6329:Ccdc162 UTSW 10 41,539,147 (GRCm39) missense possibly damaging 0.76
R6349:Ccdc162 UTSW 10 41,570,396 (GRCm39) missense probably damaging 0.97
R6398:Ccdc162 UTSW 10 41,503,145 (GRCm39) missense probably damaging 1.00
R6453:Ccdc162 UTSW 10 41,426,821 (GRCm39) missense probably damaging 1.00
R6602:Ccdc162 UTSW 10 41,491,976 (GRCm39) missense probably benign 0.00
R6627:Ccdc162 UTSW 10 41,539,181 (GRCm39) missense probably damaging 1.00
R6722:Ccdc162 UTSW 10 41,520,637 (GRCm39) missense probably benign 0.35
R6750:Ccdc162 UTSW 10 41,437,222 (GRCm39) missense possibly damaging 0.57
R6968:Ccdc162 UTSW 10 41,549,840 (GRCm39) missense possibly damaging 0.55
R6970:Ccdc162 UTSW 10 41,491,954 (GRCm39) missense probably benign 0.03
R6989:Ccdc162 UTSW 10 41,457,349 (GRCm39) missense probably damaging 0.99
R7008:Ccdc162 UTSW 10 41,428,411 (GRCm39) missense probably damaging 1.00
R7135:Ccdc162 UTSW 10 41,549,855 (GRCm39) missense probably benign 0.00
R7139:Ccdc162 UTSW 10 41,542,717 (GRCm39) missense possibly damaging 0.49
R7224:Ccdc162 UTSW 10 41,437,187 (GRCm39) missense probably damaging 1.00
R7230:Ccdc162 UTSW 10 41,554,809 (GRCm39) missense probably damaging 1.00
R7256:Ccdc162 UTSW 10 41,431,997 (GRCm39) missense probably damaging 0.99
R7261:Ccdc162 UTSW 10 41,437,136 (GRCm39) missense probably benign 0.02
R7390:Ccdc162 UTSW 10 41,510,044 (GRCm39) missense probably benign
R7712:Ccdc162 UTSW 10 41,503,223 (GRCm39) missense possibly damaging 0.56
R7726:Ccdc162 UTSW 10 41,429,071 (GRCm39) missense probably benign 0.00
R7754:Ccdc162 UTSW 10 41,463,371 (GRCm39) missense probably damaging 1.00
R7764:Ccdc162 UTSW 10 41,566,109 (GRCm39) missense possibly damaging 0.95
R8053:Ccdc162 UTSW 10 41,520,577 (GRCm39) missense probably benign
R8088:Ccdc162 UTSW 10 41,499,410 (GRCm39) missense possibly damaging 0.68
R8094:Ccdc162 UTSW 10 41,488,864 (GRCm39) missense probably benign 0.02
R8097:Ccdc162 UTSW 10 41,510,115 (GRCm39) missense probably benign 0.03
R8321:Ccdc162 UTSW 10 41,510,029 (GRCm39) missense probably damaging 0.98
R8377:Ccdc162 UTSW 10 41,457,306 (GRCm39) missense probably benign 0.08
R8399:Ccdc162 UTSW 10 41,415,517 (GRCm39) missense probably damaging 1.00
R8669:Ccdc162 UTSW 10 41,428,352 (GRCm39) missense probably benign 0.06
R8772:Ccdc162 UTSW 10 41,506,033 (GRCm39) missense probably damaging 0.99
R8810:Ccdc162 UTSW 10 41,542,737 (GRCm39) missense probably benign 0.41
R8903:Ccdc162 UTSW 10 41,531,440 (GRCm39) critical splice donor site probably null
R8928:Ccdc162 UTSW 10 41,462,245 (GRCm39) splice site probably benign
R8950:Ccdc162 UTSW 10 41,474,507 (GRCm39) missense probably benign 0.00
R8960:Ccdc162 UTSW 10 41,429,178 (GRCm39) missense probably damaging 0.96
R9071:Ccdc162 UTSW 10 41,457,174 (GRCm39) nonsense probably null
R9254:Ccdc162 UTSW 10 41,488,944 (GRCm39) critical splice acceptor site probably null
R9297:Ccdc162 UTSW 10 41,506,110 (GRCm39) missense probably benign
R9318:Ccdc162 UTSW 10 41,506,110 (GRCm39) missense probably benign
R9518:Ccdc162 UTSW 10 41,465,572 (GRCm39) missense probably damaging 1.00
R9525:Ccdc162 UTSW 10 41,559,222 (GRCm39) missense probably damaging 0.99
R9539:Ccdc162 UTSW 10 41,463,407 (GRCm39) missense possibly damaging 0.54
R9638:Ccdc162 UTSW 10 41,437,159 (GRCm39) missense probably benign 0.01
Z1176:Ccdc162 UTSW 10 41,530,993 (GRCm39) missense possibly damaging 0.84
Z1176:Ccdc162 UTSW 10 41,481,104 (GRCm39) missense possibly damaging 0.84
Z1176:Ccdc162 UTSW 10 41,429,127 (GRCm39) missense probably benign 0.00
Z1176:Ccdc162 UTSW 10 41,566,088 (GRCm39) missense probably benign 0.00
Z1177:Ccdc162 UTSW 10 41,559,191 (GRCm39) missense probably benign 0.00
Predicted Primers PCR Primer
(F):5'- CAAAGTCCATTCTGCCATGGG -3'
(R):5'- GGACTGTTGAAAGGTCCTGAGC -3'

Sequencing Primer
(F):5'- CCTCGGTATGTAGCCATGGTC -3'
(R):5'- GAGCTTCTACCCAGTAGGCAATTTG -3'
Posted On 2021-10-11