Mutagenetix > Incidental Mutation

Incidental Mutation 'R9011:Kif28'

685614

Institutional Source

Beutler Lab

Gene Symbol

Kif28

Ensembl Gene

ENSMUSG00000087236

Gene Name

kinesin family member 28

Synonyms

LOC383592, Gm1305

MMRRC Submission

068841-MU

Accession Numbers

Essential gene?

Possibly essential (E-score: 0.610) question?

Stock #

R9011 (G1)

Quality Score

222.009

Status

Validated

Chromosome

Chromosomal Location

179522862-179572836 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

G to C at 179529984 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Leucine to Valine at position 726 (L726V)

Ref Sequence

ENSEMBL: ENSMUSP00000152770 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000131716] [ENSMUST00000211943] [ENSMUST00000221136] [ENSMUST00000223392]

AlphaFold

no structure available at present

Predicted Effect

SMART Domains

Protein: ENSMUSP00000118935
Gene: ENSMUSG00000087236
AA Change: L726V

Domain	Start	End	E-Value	Type
KISc	3	331	1.02e-120	SMART
low complexity region	343	354	N/A	INTRINSIC
FHA	424	473	1.12e-3	SMART
Pfam:KIF1B	615	654	1.3e-7	PFAM
low complexity region	842	857	N/A	INTRINSIC
low complexity region	959	973	N/A	INTRINSIC

Predicted Effect

probably benign
Transcript: ENSMUST00000211943
AA Change: L658V

PolyPhen 2 Score 0.005 (Sensitivity: 0.97; Specificity: 0.74)

Predicted Effect

possibly damaging
Transcript: ENSMUST00000221136
AA Change: L726V

PolyPhen 2 Score 0.887 (Sensitivity: 0.82; Specificity: 0.94)

Predicted Effect

probably benign
Transcript: ENSMUST00000223392

Coding Region Coverage

1x: 100.0%
3x: 99.9%
10x: 99.7%
20x: 98.9%

Validation Efficiency

100% (62/62)

Allele List at MGI

Other mutations in this stock

Total: 62 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Actr10	A	G	12: 70,999,734 (GRCm39)	T177A	probably benign	Het
Adgrb2	G	A	4: 129,916,111 (GRCm39)	D1468N	probably damaging	Het
Aldh16a1	A	G	7: 44,794,951 (GRCm39)	F506S	probably damaging	Het
Ankfn1	A	T	11: 89,417,444 (GRCm39)	M56K	probably benign	Het
Atxn7l2	T	C	3: 108,114,756 (GRCm39)	S97G	probably benign	Het
Cacna1g	C	T	11: 94,306,663 (GRCm39)	G1905D	probably benign	Het
Ccdc192	A	T	18: 57,800,376 (GRCm39)	I176F	possibly damaging	Het
Ccne1	A	T	7: 37,806,085 (GRCm39)	M13K	probably benign	Het
Chil3	A	T	3: 106,057,031 (GRCm39)	Y304*	probably null	Het
Chst15	A	G	7: 131,872,246 (GRCm39)	F12L	probably benign	Het
Cldn23	T	A	8: 36,292,826 (GRCm39)	I221F	probably damaging	Het
Col16a1	T	C	4: 129,946,652 (GRCm39)	F92L	unknown	Het
Col6a3	A	T	1: 90,710,057 (GRCm39)		probably benign	Het
Cyp2w1	T	A	5: 139,340,314 (GRCm39)	V199E	possibly damaging	Het
Dmxl1	A	G	18: 49,997,240 (GRCm39)	Y512C	probably damaging	Het
Dop1a	A	T	9: 86,397,396 (GRCm39)	H900L	probably damaging	Het
Ehd1	T	C	19: 6,348,108 (GRCm39)	L362P	probably benign	Het
Eif3l	T	G	15: 78,973,725 (GRCm39)	M380R	possibly damaging	Het
Fer1l5	A	T	1: 36,441,601 (GRCm39)	K605N	probably damaging	Het
Fgfbp1	T	G	5: 44,136,627 (GRCm39)	N222H	probably benign	Het
Flcn	A	G	11: 59,690,233 (GRCm39)	L273P	possibly damaging	Het
Fzd10	C	G	5: 128,679,369 (GRCm39)	P363R	probably damaging	Het
Gabpa	A	G	16: 84,638,209 (GRCm39)		probably benign	Het
Garin4	A	C	1: 190,895,258 (GRCm39)	S462A	probably benign	Het
Gfi1	A	G	5: 107,873,425 (GRCm39)		probably null	Het
Ift57	A	G	16: 49,579,777 (GRCm39)	Q316R	probably benign	Het
Itga11	T	C	9: 62,662,909 (GRCm39)	F542L	probably benign	Het
Krt90	A	G	15: 101,471,235 (GRCm39)	I9T	probably benign	Het
Lefty1	A	T	1: 180,765,241 (GRCm39)	M270L	probably benign	Het
Mipol1	A	T	12: 57,503,865 (GRCm39)	E344D	probably benign	Het
Mon2	A	T	10: 122,862,213 (GRCm39)	M737K	possibly damaging	Het
Mrpl14	A	G	17: 46,009,330 (GRCm39)	N143S	probably benign	Het
Nelfcd	T	A	2: 174,268,717 (GRCm39)	H589Q	probably benign	Het
Npepps	T	C	11: 97,131,757 (GRCm39)	M366V	probably damaging	Het
Or5b12	A	T	19: 12,897,479 (GRCm39)	S65T	probably damaging	Het
Platr25	T	A	13: 62,848,280 (GRCm39)	H194L	probably damaging	Het
Plekhg4	T	C	8: 106,102,284 (GRCm39)	I127T	probably benign	Het
Ralgapa1	A	T	12: 55,652,314 (GRCm39)		probably benign	Het
Rarb	A	G	14: 16,435,140 (GRCm38)	V302A	probably damaging	Het
Rc3h1	A	C	1: 160,792,673 (GRCm39)	T1037P	probably damaging	Het
Rnaset2a	G	A	17: 8,356,760 (GRCm39)	P102S	probably damaging	Het
Scn10a	A	C	9: 119,459,160 (GRCm39)	S1166R	probably damaging	Het
Scn3a	A	G	2: 65,352,170 (GRCm39)	M380T	possibly damaging	Het
Serpinb13	A	G	1: 106,923,519 (GRCm39)	I75V	probably benign	Het
Slc35f5	G	A	1: 125,490,050 (GRCm39)	A27T	probably benign	Het
Slc45a3	G	A	1: 131,905,714 (GRCm39)	V246I	probably benign	Het
Slc7a14	G	A	3: 31,278,345 (GRCm39)	T420I	probably damaging	Het
Slc9a9	A	G	9: 94,818,493 (GRCm39)	T296A	probably benign	Het
Smyd2	G	A	1: 189,628,833 (GRCm39)	H157Y	probably damaging	Het
Spata32	T	A	11: 103,100,677 (GRCm39)	H30L	probably benign	Het
Srarp	T	C	4: 141,160,344 (GRCm39)	E163G	possibly damaging	Het
Tcstv2a	A	G	13: 120,725,746 (GRCm39)	T137A	probably damaging	Het
Tmed8	A	G	12: 87,220,938 (GRCm39)	I216T	probably damaging	Het
Tnni3k	A	T	3: 154,562,186 (GRCm39)	L697Q	probably damaging	Het
Tra2b	G	A	16: 22,065,940 (GRCm39)	R286C	unknown	Het
Trav7-6	A	G	14: 53,954,604 (GRCm39)	K65E	probably benign	Het
Ttn	T	C	2: 76,540,506 (GRCm39)	D34160G	possibly damaging	Het
Umad1	T	A	6: 8,373,931 (GRCm39)	C36*	probably null	Het
Ush2a	A	T	1: 188,638,676 (GRCm39)	T4029S	probably damaging	Het
Usp9y	C	T	Y: 1,316,978 (GRCm39)	S1857N	probably benign	Het
Vwa3b	A	G	1: 37,154,767 (GRCm39)	N517S	probably damaging	Het
Zfp583	G	A	7: 6,319,627 (GRCm39)	P462S	probably damaging	Het

Other mutations in Kif28

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00486:Kif28	APN	1	179,530,081 (GRCm39)	missense	probably damaging	1.00
IGL00581:Kif28	APN	1	179,567,522 (GRCm39)	missense	probably benign	0.14
R0348:Kif28	UTSW	1	179,558,818 (GRCm39)	missense	probably damaging	1.00
R0388:Kif28	UTSW	1	179,567,654 (GRCm39)	missense	possibly damaging	0.71
R0412:Kif28	UTSW	1	179,530,091 (GRCm39)	missense	probably benign	0.01
R0788:Kif28	UTSW	1	179,532,788 (GRCm39)	unclassified	probably benign
R0960:Kif28	UTSW	1	179,523,370 (GRCm39)	nonsense	probably null
R1365:Kif28	UTSW	1	179,567,552 (GRCm39)	nonsense	probably null
R1420:Kif28	UTSW	1	179,529,962 (GRCm39)	missense	probably damaging	1.00
R1442:Kif28	UTSW	1	179,532,697 (GRCm39)	missense	possibly damaging	0.73
R1507:Kif28	UTSW	1	179,563,571 (GRCm39)	missense	probably damaging	1.00
R1818:Kif28	UTSW	1	179,533,319 (GRCm39)	missense	possibly damaging	0.66
R1819:Kif28	UTSW	1	179,533,319 (GRCm39)	missense	possibly damaging	0.66
R1903:Kif28	UTSW	1	179,530,088 (GRCm39)	missense	possibly damaging	0.63
R2221:Kif28	UTSW	1	179,560,676 (GRCm39)	missense	possibly damaging	0.80
R2358:Kif28	UTSW	1	179,537,024 (GRCm39)	missense	probably damaging	1.00
R4916:Kif28	UTSW	1	179,530,085 (GRCm39)	missense	probably benign	0.09
R4943:Kif28	UTSW	1	179,541,516 (GRCm39)	missense	probably benign	0.02
R4967:Kif28	UTSW	1	179,536,007 (GRCm39)	missense	probably damaging	1.00
R4974:Kif28	UTSW	1	179,526,209 (GRCm39)	missense	probably damaging	0.98
R5152:Kif28	UTSW	1	179,530,103 (GRCm39)	missense	probably damaging	1.00
R5382:Kif28	UTSW	1	179,527,847 (GRCm39)	missense	probably damaging	1.00
R5649:Kif28	UTSW	1	179,525,336 (GRCm39)	splice site	probably null
R5999:Kif28	UTSW	1	179,523,355 (GRCm39)	missense	probably damaging	1.00
R6017:Kif28	UTSW	1	179,527,018 (GRCm39)	missense	probably benign	0.24
R6180:Kif28	UTSW	1	179,525,337 (GRCm39)	splice site	probably null
R6875:Kif28	UTSW	1	179,563,559 (GRCm39)	missense	probably damaging	0.98
R7400:Kif28	UTSW	1	179,527,839 (GRCm39)	missense	probably damaging	1.00
R7402:Kif28	UTSW	1	179,567,644 (GRCm39)	missense	probably benign	0.00
R7530:Kif28	UTSW	1	179,536,045 (GRCm39)	missense	probably benign	0.31
R7589:Kif28	UTSW	1	179,558,965 (GRCm39)	missense	probably benign	0.01
R7648:Kif28	UTSW	1	179,536,989 (GRCm39)	missense	possibly damaging	0.89
R7815:Kif28	UTSW	1	179,563,548 (GRCm39)	missense	probably damaging	1.00
R8030:Kif28	UTSW	1	179,526,629 (GRCm39)	missense	probably benign	0.04
R8050:Kif28	UTSW	1	179,537,014 (GRCm39)	missense	probably benign	0.00
R8088:Kif28	UTSW	1	179,527,919 (GRCm39)	missense	probably damaging	1.00
R8781:Kif28	UTSW	1	179,525,481 (GRCm39)	missense	probably benign	0.00
R8947:Kif28	UTSW	1	179,544,320 (GRCm39)	missense	possibly damaging	0.94
R9161:Kif28	UTSW	1	179,526,244 (GRCm39)	missense	probably benign	0.29
R9164:Kif28	UTSW	1	179,533,333 (GRCm39)	missense	probably damaging	1.00
R9358:Kif28	UTSW	1	179,563,695 (GRCm39)	missense	probably benign	0.09
Z1176:Kif28	UTSW	1	179,560,699 (GRCm39)	missense	probably benign	0.05
Z1177:Kif28	UTSW	1	179,555,784 (GRCm39)	missense	not run

Predicted Primers

PCR Primer
(F):5'- AAGGCCAAATCATGAATGAGTTC -3'
(R):5'- TTCTAGAGAGCAGAGACAGCC -3'

Sequencing Primer
(F):5'- CTAAGCAGCCATGTGAGATCTCG -3'
(R):5'- CCACGTAGCTCAGGAAGATGAC -3'

Posted On

2021-10-11